RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 RPL36AP83881 106 aaKnown RBP13.02□□□□□ -0.32
SHANK3-201ENST00000262795 RPL36ALQ969Q0 106 aaKnown RBP13.02□□□□□ -0.32
SHANK3-201ENST00000262795 A0A087WWL8 130 aa13.02□□□□□ -0.32
SHANK3-201ENST00000262795 BUB1B-PAK6H3BSN5 160 aa13.02□□□□□ -0.32
SHANK3-201ENST00000262795 OR2K2Q8NGT1 345 aa13.02□□□□□ -0.32
SHANK3-201ENST00000262795 GATAD1Q8WUU5 269 aa13.02□□□□□ -0.32
SHANK3-201ENST00000262795 AICDAQ9GZX7 198 aa13.02□□□□□ -0.32
SHANK3-201ENST00000262795 TRAV5A0A0B4J249 113 aa13.02□□□□□ -0.33
SHANK3-201ENST00000262795 LYZL4Q96KX0 146 aa13.02□□□□□ -0.33
SHANK3-201ENST00000262795 NPDC1Q9NQX5 325 aaPredicted RBP13.02□□□□□ -0.33
SHANK3-201ENST00000262795 FAM90A26D6RGX4 464 aa13.02□□□□□ -0.33
SHANK3-201ENST00000262795 ATP5G3P48201 142 aa13.02□□□□□ -0.33
SHANK3-201ENST00000262795 TMEM144Q7Z5S9 345 aa13.02□□□□□ -0.33
SHANK3-201ENST00000262795 ADMP35318 185 aa13.02□□□□□ -0.33
SHANK3-201ENST00000262795 OR11H2Q8NH07 326 aa13.02□□□□□ -0.33
SHANK3-201ENST00000262795 ALX4Q9H161 411 aaPredicted RBP13.02□□□□□ -0.33
SHANK3-201ENST00000262795 TRAV9-2A0A087WT02 112 aa13.01□□□□□ -0.33
SHANK3-201ENST00000262795 PIN1P1O15428 100 aa13.01□□□□□ -0.33
SHANK3-201ENST00000262795 KLK9Q9UKQ9 250 aa13.01□□□□□ -0.33
SHANK3-201ENST00000262795 GAGE2EQ4V326 116 aa13.01□□□□□ -0.33
SHANK3-201ENST00000262795 IGF2BP2-AS1Q96M15 143 aa13.01□□□□□ -0.33
SHANK3-201ENST00000262795 GAGE2DQ9UEU5 116 aa13.01□□□□□ -0.33
SHANK3-201ENST00000262795 TRAV8-1A0A0A6YYK1 113 aa13.01□□□□□ -0.33
SHANK3-201ENST00000262795 GAGE12JA6NER3 117 aa13.01□□□□□ -0.33
SHANK3-201ENST00000262795 GAGE1Q13065 139 aa13.01□□□□□ -0.33
SHANK3-201ENST00000262795 GAGE4Q13068 117 aa13.01□□□□□ -0.33
SHANK3-201ENST00000262795 GAGE5Q13069 117 aa13.01□□□□□ -0.33
SHANK3-201ENST00000262795 GAGE13Q4V321 117 aa13.01□□□□□ -0.33
SHANK3-201ENST00000262795 RHPN1-AS1Q9BWJ2 59 aa13.01□□□□□ -0.33
SHANK3-201ENST00000262795 SHISA3A0PJX4 238 aa13.01□□□□□ -0.33
SHANK3-201ENST00000262795 YPEL1O60688 119 aa13.01□□□□□ -0.33
SHANK3-201ENST00000262795 C6orf226Q5I0X4 101 aa13.01□□□□□ -0.33
SHANK3-201ENST00000262795 GGNQ86UU5 652 aa13.01□□□□□ -0.33
SHANK3-201ENST00000262795 EXOC3-AS1Q8N2X6 119 aa13.01□□□□□ -0.33
SHANK3-201ENST00000262795 TMEM86BQ8N661 226 aa13.01□□□□□ -0.33
SHANK3-201ENST00000262795 YPEL2Q96QA6 119 aa13.01□□□□□ -0.33
SHANK3-201ENST00000262795 A8MXK9 166 aa13.01□□□□□ -0.33
SHANK3-201ENST00000262795 SCRT1Q9BWW7 348 aa13.01□□□□□ -0.33
SHANK3-201ENST00000262795 IGKV1OR2-108A0A075B7D4 117 aa13□□□□□ -0.33
SHANK3-201ENST00000262795 TRBV7-1A0A0A6YYK4 115 aa13□□□□□ -0.33
SHANK3-201ENST00000262795 F8VVB4 439 aa13□□□□□ -0.33
SHANK3-201ENST00000262795 F8VWA3 439 aa13□□□□□ -0.33
SHANK3-201ENST00000262795 ERCC8Q13216 396 aa13□□□□□ -0.33
SHANK3-201ENST00000262795 PMS2P5A8MQ11 134 aa13□□□□□ -0.33
SHANK3-201ENST00000262795 TNFSF13O75888 250 aa13□□□□□ -0.33
SHANK3-201ENST00000262795 MINOS1Q5TGZ0 78 aa13□□□□□ -0.33
SHANK3-201ENST00000262795 PVRIGQ6DKI7 326 aa13□□□□□ -0.33
SHANK3-201ENST00000262795 ZNF497Q6ZNH5 498 aa13□□□□□ -0.33
SHANK3-201ENST00000262795 RPP21Q9H633 154 aaKnown RBP13□□□□□ -0.33
SHANK3-201ENST00000262795 MINOS1-NBL1R4GNA1 71 aa13□□□□□ -0.33
SHANK3-201ENST00000262795 UBE2E1P51965 193 aa13□□□□□ -0.33
SHANK3-201ENST00000262795 DEFB113Q30KQ7 82 aa13□□□□□ -0.33
SHANK3-201ENST00000262795 C15orf61A6NNL5 157 aa13□□□□□ -0.33
SHANK3-201ENST00000262795 MCRIP2Q9BUT9 160 aaKnown RBP13□□□□□ -0.33
SHANK3-201ENST00000262795 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13□□□□□ -0.33
SHANK3-201ENST00000262795 DKK1O94907 266 aa12.99□□□□□ -0.33
SHANK3-201ENST00000262795 LMO1P25800 156 aa12.99□□□□□ -0.33
SHANK3-201ENST00000262795 UCP1P25874 307 aa12.99□□□□□ -0.33
SHANK3-201ENST00000262795 OTORQ9NRC9 128 aa12.99□□□□□ -0.33
SHANK3-201ENST00000262795 TNFRSF6BO95407 300 aa12.99□□□□□ -0.33
SHANK3-201ENST00000262795 CSRP3P50461 194 aa12.99□□□□□ -0.33
SHANK3-201ENST00000262795 CD177Q8N6Q3 437 aa12.99□□□□□ -0.33
SHANK3-201ENST00000262795 MDS2Q8NDY4 140 aa12.99□□□□□ -0.33
SHANK3-201ENST00000262795 RNASE7Q9H1E1 156 aaKnown RBP12.99□□□□□ -0.33
SHANK3-201ENST00000262795 LSM4Q9Y4Z0 139 aaKnown RBP12.99□□□□□ -0.33
SHANK3-201ENST00000262795 DEFB136Q30KP8 78 aa12.99□□□□□ -0.33
SHANK3-201ENST00000262795 DOPEY2Q9Y3R5 2298 aa12.99□□□□□ -0.33
SHANK3-201ENST00000262795 TRBV5-7A0A0A0MS05 114 aa12.99□□□□□ -0.33
SHANK3-201ENST00000262795 PSG1P11464 419 aa12.99□□□□□ -0.33
SHANK3-201ENST00000262795 SPINK13Q1W4C9 94 aa12.99□□□□□ -0.33
SHANK3-201ENST00000262795 LAMTOR3Q9UHA4 124 aa12.99□□□□□ -0.33
SHANK3-201ENST00000262795 ZFP36P26651 326 aaKnown RBP12.99□□□□□ -0.33
SHANK3-201ENST00000262795 GTF3C1Q12789 2109 aa12.99□□□□□ -0.33
SHANK3-201ENST00000262795 RNF182Q8N6D2 247 aa12.99□□□□□ -0.33
SHANK3-201ENST00000262795 Q8TAT8 98 aa12.99□□□□□ -0.33
SHANK3-201ENST00000262795 IGFBPL1Q8WX77 278 aa12.99□□□□□ -0.33
SHANK3-201ENST00000262795 IGHV1-69DA0A0B4J2H0 117 aa12.98□□□□□ -0.33
SHANK3-201ENST00000262795 IGHV1-69P01742 117 aa12.98□□□□□ -0.33
SHANK3-201ENST00000262795 A0A1B0GUT8 65 aa12.98□□□□□ -0.33
SHANK3-201ENST00000262795 CRYGSP22914 178 aa12.98□□□□□ -0.33
SHANK3-201ENST00000262795 GAGE2BQ13066 116 aa12.98□□□□□ -0.33
SHANK3-201ENST00000262795 SPTA1P02549 2419 aa12.98□□□□□ -0.33
SHANK3-201ENST00000262795 IGLV3-12A0A075B6K2 115 aa12.98□□□□□ -0.33
SHANK3-201ENST00000262795 GRNP28799 593 aaKnown RBP12.98□□□□□ -0.33
SHANK3-201ENST00000262795 SS18Q15532 418 aa12.98□□□□□ -0.33
SHANK3-201ENST00000262795 HIST2H2BCQ6DN03 193 aa12.98□□□□□ -0.33
SHANK3-201ENST00000262795 M0R1W7 72 aa12.98□□□□□ -0.33
SHANK3-201ENST00000262795 MST1LQ2TV78 715 aa12.98□□□□□ -0.33
SHANK3-201ENST00000262795 LINC01590Q5TEZ4 76 aa12.98□□□□□ -0.33
SHANK3-201ENST00000262795 ZNF625Q96I27 306 aaPredicted RBP12.98□□□□□ -0.33
SHANK3-201ENST00000262795 GBF1Q92538 1859 aa12.98□□□□□ -0.33
SHANK3-201ENST00000262795 CYSLTR1Q9Y271 337 aa12.97□□□□□ -0.33
SHANK3-201ENST00000262795 IGKV2D-24A0A075B6R9 120 aa12.97□□□□□ -0.33
SHANK3-201ENST00000262795 GAFA1Q96PS6 74 aa12.97□□□□□ -0.33
SHANK3-201ENST00000262795 PGPEP1LA6NFU8 196 aa12.97□□□□□ -0.33
SHANK3-201ENST00000262795 LINC00205P59089 165 aa12.97□□□□□ -0.33
SHANK3-201ENST00000262795 TRBV9A0A0B4J1U6 114 aa12.97□□□□□ -0.33
SHANK3-201ENST00000262795 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.97□□□□□ -0.33
SHANK3-201ENST00000262795 NBL1P41271 181 aa12.97□□□□□ -0.33
SHANK3-201ENST00000262795 TRAV12-2A0A075B6T6 113 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms