RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 PSMB8P28062 276 aa10.09□□□□□ -0.79
VAMP7-201ENST00000262640 SLC25A39Q9BZJ4 359 aaPredicted RBP10.09□□□□□ -0.79
VAMP7-201ENST00000262640 GNB4Q9HAV0 340 aa10.09□□□□□ -0.79
VAMP7-201ENST00000262640 ESM1Q9NQ30 184 aa10.09□□□□□ -0.79
VAMP7-201ENST00000262640 ARL2-SNX15V9GYD0 113 aa10.09□□□□□ -0.79
VAMP7-201ENST00000262640 ADCYAP1P18509 176 aa10.08□□□□□ -0.8
VAMP7-201ENST00000262640 RELQ04864 619 aaPredicted RBP10.08□□□□□ -0.8
VAMP7-201ENST00000262640 SUN5Q8TC36 379 aa10.08□□□□□ -0.8
VAMP7-201ENST00000262640 TXNDC17Q9BRA2 123 aa10.08□□□□□ -0.8
VAMP7-201ENST00000262640 CARHSP1Q9Y2V2 147 aaKnown RBP10.08□□□□□ -0.8
VAMP7-201ENST00000262640 PUS1Q9Y606 427 aaKnown RBP eCLIP10.08□□□□□ -0.8
VAMP7-201ENST00000262640 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.08□□□□□ -0.8
VAMP7-201ENST00000262640 FAM181BA6NEQ2 426 aa10.08□□□□□ -0.8
VAMP7-201ENST00000262640 RPL15P61313 204 aaKnown RBP10.08□□□□□ -0.8
VAMP7-201ENST00000262640 FOXE3Q13461 319 aa10.08□□□□□ -0.8
VAMP7-201ENST00000262640 FAM209BQ5JX69 171 aa10.08□□□□□ -0.8
VAMP7-201ENST00000262640 TEX38Q6PEX7 206 aa10.08□□□□□ -0.8
VAMP7-201ENST00000262640 SHANK2-AS3Q9BTD1 123 aa10.08□□□□□ -0.8
VAMP7-201ENST00000262640 PAXXQ9BUH6 204 aa10.08□□□□□ -0.8
VAMP7-201ENST00000262640 OR51M1Q9H341 326 aa10.08□□□□□ -0.8
VAMP7-201ENST00000262640 SONP18583 2426 aaKnown RBP10.08□□□□□ -0.8
VAMP7-201ENST00000262640 H3BRN7 92 aa10.07□□□□□ -0.8
VAMP7-201ENST00000262640 APOC3P02656 99 aa10.07□□□□□ -0.8
VAMP7-201ENST00000262640 RNASE1P07998 156 aaKnown RBP10.07□□□□□ -0.8
VAMP7-201ENST00000262640 ELANEP08246 267 aa10.07□□□□□ -0.8
VAMP7-201ENST00000262640 S100A7P31151 101 aa10.07□□□□□ -0.8
VAMP7-201ENST00000262640 UBE2G2P60604 165 aa10.07□□□□□ -0.8
VAMP7-201ENST00000262640 UBE2L3P68036 154 aaKnown RBP10.07□□□□□ -0.8
VAMP7-201ENST00000262640 USF2Q15853 346 aaPredicted RBP10.07□□□□□ -0.8
VAMP7-201ENST00000262640 ZNF343Q6P1L6 599 aa10.07□□□□□ -0.8
VAMP7-201ENST00000262640 C11orf94C9JXX5 98 aa10.07□□□□□ -0.8
VAMP7-201ENST00000262640 BMPR1BO00238 502 aa10.07□□□□□ -0.8
VAMP7-201ENST00000262640 ARL3P36405 182 aa10.07□□□□□ -0.8
VAMP7-201ENST00000262640 CD81P60033 236 aa10.07□□□□□ -0.8
VAMP7-201ENST00000262640 CST9LP1Q5W188 147 aa10.07□□□□□ -0.8
VAMP7-201ENST00000262640 SERTAD4Q9NUC0 356 aa10.07□□□□□ -0.8
VAMP7-201ENST00000262640 OR10J4P0C629 311 aa10.06□□□□□ -0.8
VAMP7-201ENST00000262640 HILS1P60008 231 aa10.06□□□□□ -0.8
VAMP7-201ENST00000262640 SOHLH1Q5JUK2 328 aa10.06□□□□□ -0.8
VAMP7-201ENST00000262640 TOMM20LQ6UXN7 152 aa10.06□□□□□ -0.8
VAMP7-201ENST00000262640 LCNL1Q6ZST4 164 aa10.06□□□□□ -0.8
VAMP7-201ENST00000262640 CYB561D1Q8N8Q1 229 aa10.06□□□□□ -0.8
VAMP7-201ENST00000262640 OR4X2Q8NGF9 303 aa10.06□□□□□ -0.8
VAMP7-201ENST00000262640 OR4F5Q8NH21 305 aa10.06□□□□□ -0.8
VAMP7-201ENST00000262640 ZNF414Q96IQ9 312 aa10.06□□□□□ -0.8
VAMP7-201ENST00000262640 OR4F4Q96R69 305 aa10.06□□□□□ -0.8
VAMP7-201ENST00000262640 RNF24Q9Y225 148 aa10.06□□□□□ -0.8
VAMP7-201ENST00000262640 FAM74A7A6NL05 159 aa10.06□□□□□ -0.8
VAMP7-201ENST00000262640 PPP5D1E7EU14 171 aa10.06□□□□□ -0.8
VAMP7-201ENST00000262640 TMEM250H0YL14 139 aa10.06□□□□□ -0.8
VAMP7-201ENST00000262640 IGHV3-11P01762 117 aa10.06□□□□□ -0.8
VAMP7-201ENST00000262640 C10orf99Q6UWK7 81 aa10.06□□□□□ -0.8
VAMP7-201ENST00000262640 Q6ZSV7 163 aa10.06□□□□□ -0.8
VAMP7-201ENST00000262640 FXYD5Q96DB9 178 aa10.06□□□□□ -0.8
VAMP7-201ENST00000262640 ZFAND3Q9H8U3 227 aa10.06□□□□□ -0.8
VAMP7-201ENST00000262640 TMEM14CQ9P0S9 112 aa10.06□□□□□ -0.8
VAMP7-201ENST00000262640 RABAC1Q9UI14 185 aa10.06□□□□□ -0.8
VAMP7-201ENST00000262640 YTHDF2Q9Y5A9 579 aaKnown RBP10.06□□□□□ -0.8
VAMP7-201ENST00000262640 PDE6DO43924 150 aa10.05□□□□□ -0.8
VAMP7-201ENST00000262640 CRYBA1P05813 215 aa10.05□□□□□ -0.8
VAMP7-201ENST00000262640 PYYP10082 97 aa10.05□□□□□ -0.8
VAMP7-201ENST00000262640 RNF152Q8N8N0 203 aa10.05□□□□□ -0.8
VAMP7-201ENST00000262640 JMJD8Q96S16 334 aa10.05□□□□□ -0.8
VAMP7-201ENST00000262640 IGHV3-35A0A0C4DH35 117 aa10.05□□□□□ -0.8
VAMP7-201ENST00000262640 GP9P14770 177 aa10.05□□□□□ -0.8
VAMP7-201ENST00000262640 ATP5G3P48201 142 aa10.05□□□□□ -0.8
VAMP7-201ENST00000262640 CEBPGP53567 150 aa10.05□□□□□ -0.8
VAMP7-201ENST00000262640 LEMD1Q68G75 181 aa10.05□□□□□ -0.8
VAMP7-201ENST00000262640 SVBPQ8N300 66 aa10.05□□□□□ -0.8
VAMP7-201ENST00000262640 MYOZ3Q8TDC0 251 aa10.05□□□□□ -0.8
VAMP7-201ENST00000262640 A0A1W2PRE2 83 aa10.04□□□□□ -0.8
VAMP7-201ENST00000262640 ZNF98A6NK75 572 aa10.04□□□□□ -0.8
VAMP7-201ENST00000262640 F6UZH7 168 aa10.04□□□□□ -0.8
VAMP7-201ENST00000262640 KIAA0141Q14154 515 aaPredicted RBP10.04□□□□□ -0.8
VAMP7-201ENST00000262640 HIVEP2P31629 2446 aa10.04□□□□□ -0.8
VAMP7-201ENST00000262640 TRBV12-3P01733 135 aa10.04□□□□□ -0.8
VAMP7-201ENST00000262640 RPLP1P05386 114 aaKnown RBP10.04□□□□□ -0.8
VAMP7-201ENST00000262640 BPIFA4PQ86YQ2 179 aa10.04□□□□□ -0.8
VAMP7-201ENST00000262640 CCDC28AQ8IWP9 274 aa10.04□□□□□ -0.8
VAMP7-201ENST00000262640 NKX6-2Q9C056 277 aaPredicted RBP10.04□□□□□ -0.8
VAMP7-201ENST00000262640 INAFM1C9JVW0 142 aa10.03□□□□□ -0.8
VAMP7-201ENST00000262640 NDUFA4O00483 81 aa10.03□□□□□ -0.8
VAMP7-201ENST00000262640 GUCA2BQ16661 112 aa10.03□□□□□ -0.8
VAMP7-201ENST00000262640 FAM90A2PQ658T7 463 aa10.03□□□□□ -0.8
VAMP7-201ENST00000262640 Q71RC1 249 aaPredicted RBP10.03□□□□□ -0.8
VAMP7-201ENST00000262640 PEF1Q9UBV8 284 aaKnown RBP10.03□□□□□ -0.8
VAMP7-201ENST00000262640 NBEAP1P0C6P0 100 aa10.02□□□□□ -0.8
VAMP7-201ENST00000262640 KLHDC1Q8N7A1 406 aa10.02□□□□□ -0.8
VAMP7-201ENST00000262640 GGCTO75223 188 aaKnown RBP10.02□□□□□ -0.81
VAMP7-201ENST00000262640 SNAPINO95295 136 aa10.02□□□□□ -0.81
VAMP7-201ENST00000262640 HIST1H1EP10412 219 aaKnown RBP10.02□□□□□ -0.81
VAMP7-201ENST00000262640 OR4F17Q8NGA8 305 aa10.02□□□□□ -0.81
VAMP7-201ENST00000262640 UBE2E2Q96LR5 201 aa10.02□□□□□ -0.81
VAMP7-201ENST00000262640 METTL26Q96S19 204 aa10.02□□□□□ -0.81
VAMP7-201ENST00000262640 C16orf95Q9H693 158 aa10.02□□□□□ -0.81
VAMP7-201ENST00000262640 CLPSL1A2RUU4 121 aa10.01□□□□□ -0.81
VAMP7-201ENST00000262640 IGHV3OR16-8A0A075B7F1 116 aa10.01□□□□□ -0.81
VAMP7-201ENST00000262640 RPL7P18124 248 aaKnown RBP10.01□□□□□ -0.81
VAMP7-201ENST00000262640 FAM74A3Q4VXF1 159 aa10.01□□□□□ -0.81
VAMP7-201ENST00000262640 BLNKQ8WV28 456 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms