RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 ZNF883P0CG24 379 aa11.76□□□□□ -0.53
CUX2-201ENST00000261726 SELLP14151 372 aa11.76□□□□□ -0.53
CUX2-201ENST00000261726 DTX1Q86Y01 620 aa11.76□□□□□ -0.53
CUX2-201ENST00000261726 DEFB130BP0DP73 79 aa11.76□□□□□ -0.53
CUX2-201ENST00000261726 DEFB130AP0DP74 79 aa11.76□□□□□ -0.53
CUX2-201ENST00000261726 TMEM200BQ69YZ2 307 aa11.76□□□□□ -0.53
CUX2-201ENST00000261726 A0A087WWL8 130 aa11.76□□□□□ -0.53
CUX2-201ENST00000261726 CMC4P56277 68 aaPredicted RBP11.76□□□□□ -0.53
CUX2-201ENST00000261726 SSBP2P81877 361 aaPredicted RBP11.76□□□□□ -0.53
CUX2-201ENST00000261726 ANKRD36A6QL64 1941 aa11.75□□□□□ -0.53
CUX2-201ENST00000261726 H3BUX3 64 aa11.75□□□□□ -0.53
CUX2-201ENST00000261726 SH2D1AO60880 128 aa11.75□□□□□ -0.53
CUX2-201ENST00000261726 FGFBP3Q8TAT2 258 aa11.75□□□□□ -0.53
CUX2-201ENST00000261726 RPUSD1Q9UJJ7 312 aaKnown RBP11.75□□□□□ -0.53
CUX2-201ENST00000261726 MRPS18CQ9Y3D5 142 aaKnown RBP11.75□□□□□ -0.53
CUX2-201ENST00000261726 GUSBP1Q15486 140 aa11.75□□□□□ -0.53
CUX2-201ENST00000261726 KLF17Q5JT82 389 aaPredicted RBP11.75□□□□□ -0.53
CUX2-201ENST00000261726 SEC11AP67812 179 aa11.75□□□□□ -0.53
CUX2-201ENST00000261726 ZNF329Q86UD4 541 aa11.75□□□□□ -0.53
CUX2-201ENST00000261726 SPACA3Q8IXA5 215 aa11.75□□□□□ -0.53
CUX2-201ENST00000261726 C14orf178Q8N769 122 aaPredicted RBP11.75□□□□□ -0.53
CUX2-201ENST00000261726 ESPL1Q14674 2120 aa11.75□□□□□ -0.53
CUX2-201ENST00000261726 IGKV1-9A0A0C4DH69 117 aa11.75□□□□□ -0.53
CUX2-201ENST00000261726 NDUFS8O00217 210 aa11.75□□□□□ -0.53
CUX2-201ENST00000261726 A0A0A6YYD4 124 aa11.75□□□□□ -0.53
CUX2-201ENST00000261726 TREML4Q6UXN2 200 aa11.74□□□□□ -0.53
CUX2-201ENST00000261726 ZNF114Q8NC26 417 aa11.74□□□□□ -0.53
CUX2-201ENST00000261726 SPXQ9BT56 116 aa11.74□□□□□ -0.53
CUX2-201ENST00000261726 PATJQ8NI35 1801 aa11.74□□□□□ -0.53
CUX2-201ENST00000261726 A0A087X0K7 114 aa11.74□□□□□ -0.53
CUX2-201ENST00000261726 IGHV1-3A0A0C4DH29 117 aa11.74□□□□□ -0.53
CUX2-201ENST00000261726 PIP4P2Q8N4L2 257 aa11.74□□□□□ -0.53
CUX2-201ENST00000261726 SMPXQ9UHP9 88 aa11.74□□□□□ -0.53
CUX2-201ENST00000261726 SMKR1H3BMG3 65 aa11.74□□□□□ -0.53
CUX2-201ENST00000261726 SS18Q15532 418 aa11.74□□□□□ -0.53
CUX2-201ENST00000261726 FAM90A2PQ658T7 463 aa11.74□□□□□ -0.53
CUX2-201ENST00000261726 FAM166AQ6J272 317 aa11.74□□□□□ -0.53
CUX2-201ENST00000261726 TMEM105Q8N8V8 129 aa11.74□□□□□ -0.53
CUX2-201ENST00000261726 KLF12Q9Y4X4 402 aa11.74□□□□□ -0.53
CUX2-201ENST00000261726 TPTE2P1Q5T6R2 138 aa11.73□□□□□ -0.53
CUX2-201ENST00000261726 MRPL14Q6P1L8 145 aaKnown RBP11.73□□□□□ -0.53
CUX2-201ENST00000261726 GGTLC1Q9BX51 225 aa11.73□□□□□ -0.53
CUX2-201ENST00000261726 E9PLN8 166 aa11.73□□□□□ -0.53
CUX2-201ENST00000261726 ZNF138P52744 262 aa11.73□□□□□ -0.53
CUX2-201ENST00000261726 CFHR3Q02985 330 aa11.73□□□□□ -0.53
CUX2-201ENST00000261726 IGKV1D-8A0A087WSZ0 117 aa11.73□□□□□ -0.53
CUX2-201ENST00000261726 LINC00114Q6XXX2 140 aa11.73□□□□□ -0.53
CUX2-201ENST00000261726 BMPERQ8N8U9 685 aa11.73□□□□□ -0.53
CUX2-201ENST00000261726 COX11Q9Y6N1 276 aa11.73□□□□□ -0.53
CUX2-201ENST00000261726 RALGAPA1Q6GYQ0 2036 aa11.73□□□□□ -0.53
CUX2-201ENST00000261726 IGHV1-8P0DP01 117 aa11.73□□□□□ -0.53
CUX2-201ENST00000261726 CEACAM8P31997 349 aaPredicted RBP11.73□□□□□ -0.53
CUX2-201ENST00000261726 NR2C2APQ86WQ0 139 aa11.72□□□□□ -0.53
CUX2-201ENST00000261726 HIST1H2BLQ99880 126 aa11.72□□□□□ -0.53
CUX2-201ENST00000261726 VCYO14598 125 aa11.72□□□□□ -0.53
CUX2-201ENST00000261726 LHBP01229 141 aa11.72□□□□□ -0.53
CUX2-201ENST00000261726 CXCL1P09341 107 aa11.72□□□□□ -0.53
CUX2-201ENST00000261726 DSCR9P59020 149 aa11.72□□□□□ -0.53
CUX2-201ENST00000261726 PRIMA1Q86XR5 153 aa11.72□□□□□ -0.53
CUX2-201ENST00000261726 GNLYP22749 145 aa11.72□□□□□ -0.53
CUX2-201ENST00000261726 MGST2Q99735 147 aa11.72□□□□□ -0.53
CUX2-201ENST00000261726 HOXD3P31249 432 aaPredicted RBP11.72□□□□□ -0.53
CUX2-201ENST00000261726 TET1Q8NFU7 2136 aa11.72□□□□□ -0.53
CUX2-201ENST00000261726 H0YIZ8 118 aa11.72□□□□□ -0.53
CUX2-201ENST00000261726 SLC25A48Q6ZT89 311 aaKnown RBP11.72□□□□□ -0.53
CUX2-201ENST00000261726 TMEM158Q8WZ71 300 aa11.72□□□□□ -0.53
CUX2-201ENST00000261726 TRAV3A0A0B4J244 114 aa11.71□□□□□ -0.53
CUX2-201ENST00000261726 F8VVB4 439 aa11.71□□□□□ -0.53
CUX2-201ENST00000261726 F8VWA3 439 aa11.71□□□□□ -0.53
CUX2-201ENST00000261726 MCRIP2Q9BUT9 160 aaKnown RBP11.71□□□□□ -0.53
CUX2-201ENST00000261726 TIMM21Q9BVV7 248 aa11.71□□□□□ -0.53
CUX2-201ENST00000261726 WDR83OSQ9Y284 106 aa11.71□□□□□ -0.53
CUX2-201ENST00000261726 RBMY1FQ15415 496 aaKnown RBP11.71□□□□□ -0.53
CUX2-201ENST00000261726 LCN12Q6JVE5 192 aa11.71□□□□□ -0.53
CUX2-201ENST00000261726 TRBV7-1A0A0A6YYK4 115 aa11.71□□□□□ -0.53
CUX2-201ENST00000261726 FAM90A9PA6NNJ1 464 aa11.71□□□□□ -0.53
CUX2-201ENST00000261726 EFNA4P52798 201 aa11.71□□□□□ -0.53
CUX2-201ENST00000261726 TNFRSF14Q92956 283 aa11.71□□□□□ -0.53
CUX2-201ENST00000261726 LY6G6FQ5SQ64 297 aa11.71□□□□□ -0.54
CUX2-201ENST00000261726 DNAJC30Q96LL9 226 aa11.71□□□□□ -0.54
CUX2-201ENST00000261726 MYMXA0A1B0GTQ4 84 aa11.7□□□□□ -0.54
CUX2-201ENST00000261726 BTCP35070 178 aa11.7□□□□□ -0.54
CUX2-201ENST00000261726 HEPN1Q6WQI6 88 aa11.7□□□□□ -0.54
CUX2-201ENST00000261726 SNHG12Q9BXW3 62 aa11.7□□□□□ -0.54
CUX2-201ENST00000261726 TMEM126AQ9H061 195 aa11.7□□□□□ -0.54
CUX2-201ENST00000261726 C3orf56Q8N813 242 aa11.7□□□□□ -0.54
CUX2-201ENST00000261726 DLX4Q92988 240 aaPredicted RBP11.7□□□□□ -0.54
CUX2-201ENST00000261726 LINC01549A6NIU2 74 aa11.7□□□□□ -0.54
CUX2-201ENST00000261726 A0A1B0GWJ7 208 aa11.7□□□□□ -0.54
CUX2-201ENST00000261726 CGB3P0DN86 165 aa11.7□□□□□ -0.54
CUX2-201ENST00000261726 MSRB2Q9Y3D2 182 aa11.7□□□□□ -0.54
CUX2-201ENST00000261726 SEC16AO15027 2179 aa11.7□□□□□ -0.54
CUX2-201ENST00000261726 MYOFQ9NZM1 2061 aa11.7□□□□□ -0.54
CUX2-201ENST00000261726 GTSF1LQ9H1H1 148 aa11.7□□□□□ -0.54
CUX2-201ENST00000261726 SPSB3Q6PJ21 355 aa11.69□□□□□ -0.54
CUX2-201ENST00000261726 CGB7P0DN87 165 aa11.69□□□□□ -0.54
CUX2-201ENST00000261726 ID3Q02535 119 aa11.69□□□□□ -0.54
CUX2-201ENST00000261726 NUP35Q8NFH5 326 aa11.69□□□□□ -0.54
CUX2-201ENST00000261726 LOC102723996A0A087X1L8 192 aa11.69□□□□□ -0.54
CUX2-201ENST00000261726 FOXG1P55316 489 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 368.9 ms