RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 TRAV41A0A0B4J266 112 aa17.48■□□□□ 0.39
SIX3-201ENST00000260653 PDE6DO43924 150 aa17.48■□□□□ 0.39
SIX3-201ENST00000260653 C15orf32Q32M92 178 aa17.48■□□□□ 0.39
SIX3-201ENST00000260653 TVP23CQ96ET8 276 aa17.48■□□□□ 0.39
SIX3-201ENST00000260653 UBE2L3P68036 154 aaKnown RBP17.47■□□□□ 0.39
SIX3-201ENST00000260653 C19orf54Q5BKX5 351 aa17.47■□□□□ 0.39
SIX3-201ENST00000260653 C16orf82Q7Z2V1 217 aa17.47■□□□□ 0.39
SIX3-201ENST00000260653 BIN3Q9NQY0 253 aa17.47■□□□□ 0.39
SIX3-201ENST00000260653 TRBV9A0A0B4J1U6 114 aa17.47■□□□□ 0.39
SIX3-201ENST00000260653 OR2T8A6NH00 312 aa17.47■□□□□ 0.39
SIX3-201ENST00000260653 M0QZK8 103 aa17.47■□□□□ 0.39
SIX3-201ENST00000260653 KLK9Q2XQG4 91 aa17.47■□□□□ 0.39
SIX3-201ENST00000260653 Q6ZS46 218 aa17.47■□□□□ 0.39
SIX3-201ENST00000260653 MS4A10Q96PG2 267 aa17.47■□□□□ 0.39
SIX3-201ENST00000260653 KLK9Q9UKQ9 250 aa17.47■□□□□ 0.39
SIX3-201ENST00000260653 TOMM40O96008 361 aa17.46■□□□□ 0.39
SIX3-201ENST00000260653 CRIP2P52943 208 aaPredicted RBP17.46■□□□□ 0.39
SIX3-201ENST00000260653 RHEBQ15382 184 aa17.46■□□□□ 0.39
SIX3-201ENST00000260653 LEMD1Q68G75 181 aa17.46■□□□□ 0.39
SIX3-201ENST00000260653 HIGD1AQ9Y241 93 aa17.46■□□□□ 0.39
SIX3-201ENST00000260653 TRAV30A0A087WSZ9 112 aa17.46■□□□□ 0.38
SIX3-201ENST00000260653 SMAD7O15105 426 aaKnown RBP17.46■□□□□ 0.38
SIX3-201ENST00000260653 TXNDC17Q9BRA2 123 aa17.46■□□□□ 0.38
SIX3-201ENST00000260653 PAXXQ9BUH6 204 aa17.46■□□□□ 0.38
SIX3-201ENST00000260653 SONP18583 2426 aaKnown RBP17.46■□□□□ 0.38
SIX3-201ENST00000260653 IGHG2P01859 326 aa17.45■□□□□ 0.38
SIX3-201ENST00000260653 IER3P46695 156 aa17.45■□□□□ 0.38
SIX3-201ENST00000260653 DEFA6Q01524 100 aa17.45■□□□□ 0.38
SIX3-201ENST00000260653 VN1R17PQ8TDU5 208 aa17.45■□□□□ 0.38
SIX3-201ENST00000260653 DERL1Q9BUN8 251 aa17.45■□□□□ 0.38
SIX3-201ENST00000260653 SCO2A0A1W2PP80 73 aa17.45■□□□□ 0.38
SIX3-201ENST00000260653 SNRPCP09234 159 aaKnown RBP17.45■□□□□ 0.38
SIX3-201ENST00000260653 NDUFB4O95168 129 aa17.44■□□□□ 0.38
SIX3-201ENST00000260653 IGF1P05019 195 aa17.44■□□□□ 0.38
SIX3-201ENST00000260653 IL4P05112 153 aa17.44■□□□□ 0.38
SIX3-201ENST00000260653 YPEL3P61236 119 aaPredicted RBP17.44■□□□□ 0.38
SIX3-201ENST00000260653 C9orf139Q6ZV77 190 aa17.44■□□□□ 0.38
SIX3-201ENST00000260653 ZNF491Q8N8L2 437 aa17.44■□□□□ 0.38
SIX3-201ENST00000260653 NOL4LQ96MY1 436 aaPredicted RBP17.44■□□□□ 0.38
SIX3-201ENST00000260653 SDF2L1Q9HCN8 221 aa17.44■□□□□ 0.38
SIX3-201ENST00000260653 MLXQ9UH92 298 aa17.44■□□□□ 0.38
SIX3-201ENST00000260653 F6UZH7 168 aa17.44■□□□□ 0.38
SIX3-201ENST00000260653 NECAP1Q8NC96 275 aa17.44■□□□□ 0.38
SIX3-201ENST00000260653 RNF125Q96EQ8 232 aa17.44■□□□□ 0.38
SIX3-201ENST00000260653 MRPL27Q9P0M9 148 aaKnown RBP17.44■□□□□ 0.38
SIX3-201ENST00000260653 ARL2-SNX15V9GYD0 113 aa17.44■□□□□ 0.38
SIX3-201ENST00000260653 AKAP9Q99996 3911 aa17.43■□□□□ 0.38
SIX3-201ENST00000260653 CTSGP08311 255 aa17.43■□□□□ 0.38
SIX3-201ENST00000260653 ZNF502Q8TBZ5 544 aa17.43■□□□□ 0.38
SIX3-201ENST00000260653 FXYD5Q96DB9 178 aa17.43■□□□□ 0.38
SIX3-201ENST00000260653 CHRDL1Q9BU40 450 aa17.43■□□□□ 0.38
SIX3-201ENST00000260653 SLC25A39Q9BZJ4 359 aaPredicted RBP17.43■□□□□ 0.38
SIX3-201ENST00000260653 ACANP16112 2415 aa17.43■□□□□ 0.38
SIX3-201ENST00000260653 GGTLC3B5MD39 225 aa17.43■□□□□ 0.38
SIX3-201ENST00000260653 NAT8Q9UHE5 227 aa17.43■□□□□ 0.38
SIX3-201ENST00000260653 FCGR2BP31994 310 aaPredicted RBP17.42■□□□□ 0.38
SIX3-201ENST00000260653 CIDEAO60543 219 aa17.42■□□□□ 0.38
SIX3-201ENST00000260653 GPR183P32249 361 aa17.42■□□□□ 0.38
SIX3-201ENST00000260653 ADMP35318 185 aa17.42■□□□□ 0.38
SIX3-201ENST00000260653 TXN2Q99757 166 aa17.42■□□□□ 0.38
SIX3-201ENST00000260653 WI2-2373I1.2A0A1W2PRP0 233 aa17.41■□□□□ 0.38
SIX3-201ENST00000260653 PNRC1Q12796 327 aaPredicted RBP17.41■□□□□ 0.38
SIX3-201ENST00000260653 USF2Q15853 346 aaPredicted RBP17.41■□□□□ 0.38
SIX3-201ENST00000260653 TMEM241Q24JQ0 296 aa17.41■□□□□ 0.38
SIX3-201ENST00000260653 CCDC140Q96MF4 163 aa17.41■□□□□ 0.38
SIX3-201ENST00000260653 SMCO4Q9NRQ5 59 aa17.41■□□□□ 0.38
SIX3-201ENST00000260653 A0A1W2PRE2 83 aa17.41■□□□□ 0.38
SIX3-201ENST00000260653 GP9P14770 177 aa17.41■□□□□ 0.38
SIX3-201ENST00000260653 OR2C1O95371 312 aa17.4■□□□□ 0.38
SIX3-201ENST00000260653 STXBP6Q8NFX7 210 aa17.4■□□□□ 0.38
SIX3-201ENST00000260653 Q8WTZ3 238 aa17.4■□□□□ 0.38
SIX3-201ENST00000260653 ISOC2Q96AB3 205 aa17.4■□□□□ 0.38
SIX3-201ENST00000260653 FOXC2Q99958 501 aa17.4■□□□□ 0.38
SIX3-201ENST00000260653 TCAPO15273 167 aa17.4■□□□□ 0.38
SIX3-201ENST00000260653 RAB4AP20338 218 aa17.4■□□□□ 0.38
SIX3-201ENST00000260653 SUMO1P63165 101 aaKnown RBP17.4■□□□□ 0.38
SIX3-201ENST00000260653 ADIRFQ15847 76 aa17.4■□□□□ 0.38
SIX3-201ENST00000260653 Q6YL49 198 aa17.4■□□□□ 0.38
SIX3-201ENST00000260653 CLEC3BP05452 202 aa17.39■□□□□ 0.37
SIX3-201ENST00000260653 IL17RELQ6ZVW7 336 aa17.39■□□□□ 0.37
SIX3-201ENST00000260653 OR5R1Q8NH85 324 aa17.39■□□□□ 0.37
SIX3-201ENST00000260653 IGHV3-35A0A0C4DH35 117 aa17.39■□□□□ 0.37
SIX3-201ENST00000260653 PPIFP30405 207 aaKnown RBP17.39■□□□□ 0.37
SIX3-201ENST00000260653 SCGB2A1O75556 95 aa17.38■□□□□ 0.37
SIX3-201ENST00000260653 S100A8P05109 93 aa17.38■□□□□ 0.37
SIX3-201ENST00000260653 RPL23P62829 140 aaKnown RBP17.38■□□□□ 0.37
SIX3-201ENST00000260653 BLNKQ8WV28 456 aa17.38■□□□□ 0.37
SIX3-201ENST00000260653 C11orf52Q96A22 123 aa17.38■□□□□ 0.37
SIX3-201ENST00000260653 SHANK2-AS3Q9BTD1 123 aa17.38■□□□□ 0.37
SIX3-201ENST00000260653 TRBV20OR9-2A0A075B6H5 130 aa17.38■□□□□ 0.37
SIX3-201ENST00000260653 H3BRN7 92 aa17.38■□□□□ 0.37
SIX3-201ENST00000260653 AP4M1O00189 453 aa17.38■□□□□ 0.37
SIX3-201ENST00000260653 TRGV3P03979 118 aa17.38■□□□□ 0.37
SIX3-201ENST00000260653 CLEC19AQ6UXS0 136 aa17.38■□□□□ 0.37
SIX3-201ENST00000260653 EEF1AKMT3Q96AZ1 226 aa17.38■□□□□ 0.37
SIX3-201ENST00000260653 VPREB3Q9UKI3 123 aa17.38■□□□□ 0.37
SIX3-201ENST00000260653 CRYBB3P26998 211 aa17.37■□□□□ 0.37
SIX3-201ENST00000260653 ZNF414Q96IQ9 312 aa17.37■□□□□ 0.37
SIX3-201ENST00000260653 NOTCH2Q04721 2471 aa17.37■□□□□ 0.37
SIX3-201ENST00000260653 H3BTX0 84 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms