RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 TRGV2A0A075B6R0 118 aa3.99□□□□□ -1.77
RC3H1-201ENST00000258349 SHISA3A0PJX4 238 aa3.99□□□□□ -1.77
RC3H1-201ENST00000258349 FNDC10F2Z333 226 aa3.99□□□□□ -1.77
RC3H1-201ENST00000258349 CD55P08174 381 aa3.99□□□□□ -1.77
RC3H1-201ENST00000258349 LYL1P12980 280 aa3.99□□□□□ -1.77
RC3H1-201ENST00000258349 DUTP33316 252 aaKnown RBP3.99□□□□□ -1.77
RC3H1-201ENST00000258349 KLF17Q5JT82 389 aaPredicted RBP3.99□□□□□ -1.77
RC3H1-201ENST00000258349 GTSCR1Q86UQ5 136 aa3.99□□□□□ -1.77
RC3H1-201ENST00000258349 NPFFR1Q9GZQ6 430 aa3.99□□□□□ -1.77
RC3H1-201ENST00000258349 TECTAO75443 2155 aa3.99□□□□□ -1.77
RC3H1-201ENST00000258349 SSBP2P81877 361 aaPredicted RBP3.99□□□□□ -1.77
RC3H1-201ENST00000258349 IGHV3-49A0A0A0MS15 119 aa3.99□□□□□ -1.77
RC3H1-201ENST00000258349 A0A0A6YYD4 124 aa3.99□□□□□ -1.77
RC3H1-201ENST00000258349 FOXL2P58012 376 aa3.99□□□□□ -1.77
RC3H1-201ENST00000258349 SPSB2Q99619 263 aa3.99□□□□□ -1.77
RC3H1-201ENST00000258349 TRAV8-1A0A0A6YYK1 113 aa3.99□□□□□ -1.77
RC3H1-201ENST00000258349 TRAV5A0A0B4J249 113 aa3.99□□□□□ -1.77
RC3H1-201ENST00000258349 IGHV1-2P23083 117 aa3.99□□□□□ -1.77
RC3H1-201ENST00000258349 OCC1Q8TAD7 63 aa3.99□□□□□ -1.77
RC3H1-201ENST00000258349 REG4Q9BYZ8 158 aa3.99□□□□□ -1.77
RC3H1-201ENST00000258349 MBNL3Q9NUK0 354 aaKnown RBP3.99□□□□□ -1.77
RC3H1-201ENST00000258349 CT83Q5H943 113 aa3.99□□□□□ -1.77
RC3H1-201ENST00000258349 ANKHD1Q8IWZ3 2542 aaKnown RBP3.98□□□□□ -1.77
RC3H1-201ENST00000258349 CDK2AP2O75956 126 aa3.98□□□□□ -1.77
RC3H1-201ENST00000258349 CMC4P56277 68 aaPredicted RBP3.98□□□□□ -1.77
RC3H1-201ENST00000258349 UBE2V1Q13404 147 aa3.98□□□□□ -1.77
RC3H1-201ENST00000258349 GFI1BQ5VTD9 330 aa3.98□□□□□ -1.77
RC3H1-201ENST00000258349 DMRTA2Q96SC8 542 aa3.98□□□□□ -1.77
RC3H1-201ENST00000258349 MUC21A0A0G2JKD1 596 aa3.98□□□□□ -1.77
RC3H1-201ENST00000258349 MUC21A0A140T8X8 626 aa3.98□□□□□ -1.77
RC3H1-201ENST00000258349 MUC21Q5SSG8 566 aa3.98□□□□□ -1.77
RC3H1-201ENST00000258349 GLRX5Q86SX6 157 aa3.98□□□□□ -1.77
RC3H1-201ENST00000258349 IGKV1D-13A0A0B4J2D9 117 aa3.98□□□□□ -1.77
RC3H1-201ENST00000258349 C17orf100A8MU93 164 aa3.98□□□□□ -1.77
RC3H1-201ENST00000258349 HAX1O00165 279 aa3.98□□□□□ -1.77
RC3H1-201ENST00000258349 IGKV1-13P0DP09 117 aa3.98□□□□□ -1.77
RC3H1-201ENST00000258349 COLCA1Q6ZS62 124 aa3.98□□□□□ -1.77
RC3H1-201ENST00000258349 CTSBP07858 339 aa3.98□□□□□ -1.77
RC3H1-201ENST00000258349 RFPL3SP0C7P2 107 aa3.98□□□□□ -1.77
RC3H1-201ENST00000258349 NUP35Q8NFH5 326 aa3.98□□□□□ -1.77
RC3H1-201ENST00000258349 LYZL4Q96KX0 146 aa3.98□□□□□ -1.77
RC3H1-201ENST00000258349 PSG8Q9UQ74 426 aa3.98□□□□□ -1.77
RC3H1-201ENST00000258349 ITGB1BP1O14713 200 aa3.98□□□□□ -1.77
RC3H1-201ENST00000258349 GFRA3O60609 400 aa3.98□□□□□ -1.77
RC3H1-201ENST00000258349 PSG7Q13046 419 aa3.98□□□□□ -1.77
RC3H1-201ENST00000258349 KIR3DS1Q14943 382 aa3.98□□□□□ -1.77
RC3H1-201ENST00000258349 COL4A4P53420 1690 aaPredicted RBP3.98□□□□□ -1.77
RC3H1-201ENST00000258349 A6NNC1 897 aa3.98□□□□□ -1.77
RC3H1-201ENST00000258349 SYS1-DBNDD2H3BUS1 97 aa3.98□□□□□ -1.77
RC3H1-201ENST00000258349 D6R8Y8 96 aa3.98□□□□□ -1.77
RC3H1-201ENST00000258349 TIAF1O95411 115 aa3.98□□□□□ -1.77
RC3H1-201ENST00000258349 OR9G9P0C7N8 305 aa3.98□□□□□ -1.77
RC3H1-201ENST00000258349 SPSB3Q6PJ21 355 aa3.98□□□□□ -1.77
RC3H1-201ENST00000258349 JMJD8Q96S16 334 aa3.98□□□□□ -1.77
RC3H1-201ENST00000258349 TNFRSF6BO95407 300 aa3.98□□□□□ -1.77
RC3H1-201ENST00000258349 CXCL1P09341 107 aa3.98□□□□□ -1.77
RC3H1-201ENST00000258349 DEPPQ9NTK1 212 aa3.98□□□□□ -1.77
RC3H1-201ENST00000258349 ADARB2-AS1A8MUL3 147 aa3.98□□□□□ -1.77
RC3H1-201ENST00000258349 ATXN7O15265 892 aaPredicted RBP3.98□□□□□ -1.77
RC3H1-201ENST00000258349 NAPSAO96009 420 aa3.98□□□□□ -1.77
RC3H1-201ENST00000258349 SRSF8Q9BRL6 282 aaKnown RBP3.98□□□□□ -1.77
RC3H1-201ENST00000258349 IGHV3OR16-13A0A075B7E8 117 aa3.97□□□□□ -1.77
RC3H1-201ENST00000258349 IGHV3-74A0A0B4J1X5 117 aa3.97□□□□□ -1.77
RC3H1-201ENST00000258349 TOMM40O96008 361 aa3.97□□□□□ -1.77
RC3H1-201ENST00000258349 LYPD1Q8N2G4 141 aa3.97□□□□□ -1.77
RC3H1-201ENST00000258349 WBP1Q96G27 269 aa3.97□□□□□ -1.77
RC3H1-201ENST00000258349 COX11Q9Y6N1 276 aa3.97□□□□□ -1.77
RC3H1-201ENST00000258349 ZNHIT1O43257 154 aa3.97□□□□□ -1.77
RC3H1-201ENST00000258349 PAX8Q06710 450 aa3.97□□□□□ -1.77
RC3H1-201ENST00000258349 GUSBP1Q15486 140 aa3.97□□□□□ -1.77
RC3H1-201ENST00000258349 LINC01551Q86U37 167 aa3.97□□□□□ -1.77
RC3H1-201ENST00000258349 FDCSPQ8NFU4 85 aa3.97□□□□□ -1.77
RC3H1-201ENST00000258349 GFI1Q99684 422 aa3.97□□□□□ -1.77
RC3H1-201ENST00000258349 VGLL1Q99990 258 aa3.97□□□□□ -1.77
RC3H1-201ENST00000258349 TRBV6-6A0A0A6YYG2 114 aa3.97□□□□□ -1.77
RC3H1-201ENST00000258349 DNAJC30Q96LL9 226 aa3.97□□□□□ -1.77
RC3H1-201ENST00000258349 PRADC1Q9BSG0 188 aa3.97□□□□□ -1.77
RC3H1-201ENST00000258349 S4R3C0 116 aa3.97□□□□□ -1.77
RC3H1-201ENST00000258349 ID3Q02535 119 aa3.97□□□□□ -1.77
RC3H1-201ENST00000258349 C2orf82Q6UX34 121 aa3.97□□□□□ -1.77
RC3H1-201ENST00000258349 TMEM75Q8N9X5 138 aa3.97□□□□□ -1.77
RC3H1-201ENST00000258349 CHAC1Q9BUX1 264 aa3.97□□□□□ -1.77
RC3H1-201ENST00000258349 GGTLC1Q9BX51 225 aa3.97□□□□□ -1.77
RC3H1-201ENST00000258349 PYYP10082 97 aa3.97□□□□□ -1.77
RC3H1-201ENST00000258349 HOXD3P31249 432 aaPredicted RBP3.97□□□□□ -1.77
RC3H1-201ENST00000258349 MESP2Q0VG99 397 aa3.97□□□□□ -1.77
RC3H1-201ENST00000258349 ERCC8Q13216 396 aa3.97□□□□□ -1.77
RC3H1-201ENST00000258349 PDE6HQ13956 83 aa3.97□□□□□ -1.77
RC3H1-201ENST00000258349 TEX43Q6ZNM6 134 aa3.97□□□□□ -1.77
RC3H1-201ENST00000258349 FAM216BQ8N7L0 139 aa3.97□□□□□ -1.77
RC3H1-201ENST00000258349 RNASE6Q93091 150 aaKnown RBP3.97□□□□□ -1.77
RC3H1-201ENST00000258349 GAGE12BA1L429 117 aa3.97□□□□□ -1.77
RC3H1-201ENST00000258349 TMEM8BA6NDV4 472 aa3.97□□□□□ -1.77
RC3H1-201ENST00000258349 TREML4Q6UXN2 200 aa3.97□□□□□ -1.77
RC3H1-201ENST00000258349 CST9LQ9H4G1 147 aa3.97□□□□□ -1.77
RC3H1-201ENST00000258349 IGHV3-35A0A0C4DH35 117 aa3.97□□□□□ -1.77
RC3H1-201ENST00000258349 GATA2P23769 480 aaPredicted RBP3.97□□□□□ -1.77
RC3H1-201ENST00000258349 PSG3Q16557 428 aa3.97□□□□□ -1.77
RC3H1-201ENST00000258349 BOD1L2Q8IYS8 172 aa3.97□□□□□ -1.77
RC3H1-201ENST00000258349 IGLV3-12A0A075B6K2 115 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms