RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 AARDQ4LEZ3 155 aa13.57□□□□□ -0.24
SGPP1-201ENST00000247225 TM4SF20Q53R12 229 aa13.57□□□□□ -0.24
SGPP1-201ENST00000247225 OR4C13Q8NGP0 309 aa13.57□□□□□ -0.24
SGPP1-201ENST00000247225 PRSS3P2Q8NHM4 247 aa13.57□□□□□ -0.24
SGPP1-201ENST00000247225 GPR82Q96P67 336 aa13.57□□□□□ -0.24
SGPP1-201ENST00000247225 RPP21Q9H633 154 aaKnown RBP13.57□□□□□ -0.24
SGPP1-201ENST00000247225 SPG11Q96JI7 2443 aa13.57□□□□□ -0.24
SGPP1-201ENST00000247225 A8MWL6 223 aa13.57□□□□□ -0.24
SGPP1-201ENST00000247225 C22orf46C9J442 243 aa13.57□□□□□ -0.24
SGPP1-201ENST00000247225 KLF17Q5JT82 389 aaPredicted RBP13.57□□□□□ -0.24
SGPP1-201ENST00000247225 RAB37Q96AX2 223 aa13.57□□□□□ -0.24
SGPP1-201ENST00000247225 GAL3ST2Q9H3Q3 398 aa13.57□□□□□ -0.24
SGPP1-201ENST00000247225 ANKHD1Q8IWZ3 2542 aaKnown RBP13.57□□□□□ -0.24
SGPP1-201ENST00000247225 K7EM74 188 aa13.56□□□□□ -0.24
SGPP1-201ENST00000247225 COX19Q49B96 90 aa13.56□□□□□ -0.24
SGPP1-201ENST00000247225 ZNF788Q6ZQV5 615 aa13.56□□□□□ -0.24
SGPP1-201ENST00000247225 ZADH2Q8N4Q0 377 aa13.56□□□□□ -0.24
SGPP1-201ENST00000247225 PERPQ96FX8 193 aa13.56□□□□□ -0.24
SGPP1-201ENST00000247225 IGHV1-24A0A0C4DH33 117 aa13.56□□□□□ -0.24
SGPP1-201ENST00000247225 NDUFB3O43676 98 aa13.56□□□□□ -0.24
SGPP1-201ENST00000247225 FBXL15Q9H469 300 aa13.56□□□□□ -0.24
SGPP1-201ENST00000247225 PTPRBP23467 1997 aa13.56□□□□□ -0.24
SGPP1-201ENST00000247225 LHBP01229 141 aa13.56□□□□□ -0.24
SGPP1-201ENST00000247225 IGHG3P01860 377 aa13.56□□□□□ -0.24
SGPP1-201ENST00000247225 C2orf70A6NJV1 201 aa13.55□□□□□ -0.24
SGPP1-201ENST00000247225 PPIAL4DF5H284 164 aa13.55□□□□□ -0.24
SGPP1-201ENST00000247225 CD40P25942 277 aa13.55□□□□□ -0.24
SGPP1-201ENST00000247225 RELQ04864 619 aaPredicted RBP13.55□□□□□ -0.24
SGPP1-201ENST00000247225 VMA21Q3ZAQ7 101 aa13.55□□□□□ -0.24
SGPP1-201ENST00000247225 C1orf162Q8NEQ5 155 aaPredicted RBP13.55□□□□□ -0.24
SGPP1-201ENST00000247225 MRPL32Q9BYC8 188 aaKnown RBP13.55□□□□□ -0.24
SGPP1-201ENST00000247225 HILPDAQ9Y5L2 63 aa13.55□□□□□ -0.24
SGPP1-201ENST00000247225 M0R3E3 92 aa13.55□□□□□ -0.24
SGPP1-201ENST00000247225 IGHV3-23P01764 117 aa13.55□□□□□ -0.24
SGPP1-201ENST00000247225 SLC25A34Q6PIV7 304 aa13.55□□□□□ -0.24
SGPP1-201ENST00000247225 CHODLQ9H9P2 273 aa13.55□□□□□ -0.24
SGPP1-201ENST00000247225 CREBBPQ92793 2442 aa13.55□□□□□ -0.24
SGPP1-201ENST00000247225 SYS1-DBNDD2H3BUS1 97 aa13.54□□□□□ -0.24
SGPP1-201ENST00000247225 TIMM23BQ5SRD1 257 aa13.54□□□□□ -0.24
SGPP1-201ENST00000247225 OSR1Q8TAX0 266 aaPredicted RBP13.54□□□□□ -0.24
SGPP1-201ENST00000247225 MBD6Q96DN6 1003 aa13.54□□□□□ -0.24
SGPP1-201ENST00000247225 APOHP02749 345 aaPredicted RBP13.54□□□□□ -0.24
SGPP1-201ENST00000247225 FOXE3Q13461 319 aa13.54□□□□□ -0.24
SGPP1-201ENST00000247225 IGFL4Q6B9Z1 124 aa13.54□□□□□ -0.24
SGPP1-201ENST00000247225 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.54□□□□□ -0.24
SGPP1-201ENST00000247225 URB1-AS1Q96HZ7 61 aa13.54□□□□□ -0.24
SGPP1-201ENST00000247225 MAP1LC3CQ9BXW4 147 aa13.54□□□□□ -0.24
SGPP1-201ENST00000247225 IGKV1D-37A0A075B6S9 117 aa13.54□□□□□ -0.24
SGPP1-201ENST00000247225 TNFRSF1AP19438 455 aa13.54□□□□□ -0.24
SGPP1-201ENST00000247225 PPIAL4EA0A075B759 164 aa13.53□□□□□ -0.24
SGPP1-201ENST00000247225 PPIAL4FP0DN26 164 aa13.53□□□□□ -0.24
SGPP1-201ENST00000247225 CACNG8Q8WXS5 425 aa13.53□□□□□ -0.24
SGPP1-201ENST00000247225 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.53□□□□□ -0.24
SGPP1-201ENST00000247225 IGHV2-26A0A0B4J1V2 119 aa13.53□□□□□ -0.24
SGPP1-201ENST00000247225 ARMS2P0C7Q2 107 aa13.53□□□□□ -0.24
SGPP1-201ENST00000247225 RPL27AP46776 148 aaKnown RBP13.53□□□□□ -0.24
SGPP1-201ENST00000247225 TMEM191AQ9H0A3 160 aa13.53□□□□□ -0.24
SGPP1-201ENST00000247225 CGB1A6NKQ9 187 aa13.52□□□□□ -0.24
SGPP1-201ENST00000247225 OR5AL1P0C617 328 aa13.52□□□□□ -0.24
SGPP1-201ENST00000247225 NHLH1Q02575 133 aa13.52□□□□□ -0.24
SGPP1-201ENST00000247225 LRRC10Q5BKY1 277 aa13.52□□□□□ -0.24
SGPP1-201ENST00000247225 FA2HQ7L5A8 372 aa13.52□□□□□ -0.24
SGPP1-201ENST00000247225 C19orf24Q9BVV8 132 aa13.52□□□□□ -0.24
SGPP1-201ENST00000247225 MRPL27Q9P0M9 148 aaKnown RBP13.52□□□□□ -0.24
SGPP1-201ENST00000247225 F11RQ9Y624 299 aaKnown RBP13.52□□□□□ -0.24
SGPP1-201ENST00000247225 FAM106CPP0CH98 169 aa13.52□□□□□ -0.25
SGPP1-201ENST00000247225 ARF6P62330 175 aa13.52□□□□□ -0.25
SGPP1-201ENST00000247225 HES1Q14469 280 aa13.52□□□□□ -0.25
SGPP1-201ENST00000247225 FAM106AQ4KMX7 169 aa13.52□□□□□ -0.25
SGPP1-201ENST00000247225 ORAOV1Q8WV07 137 aa13.52□□□□□ -0.25
SGPP1-201ENST00000247225 FAM215AQ9Y5M1 114 aa13.52□□□□□ -0.25
SGPP1-201ENST00000247225 INSIG2Q9Y5U4 225 aa13.52□□□□□ -0.25
SGPP1-201ENST00000247225 IGLC7A0M8Q6 106 aa13.51□□□□□ -0.25
SGPP1-201ENST00000247225 TCRAP04437 139 aa13.51□□□□□ -0.25
SGPP1-201ENST00000247225 LINC00312Q9Y6C7 94 aa13.51□□□□□ -0.25
SGPP1-201ENST00000247225 M0R296 226 aa13.51□□□□□ -0.25
SGPP1-201ENST00000247225 CFHR2P36980 270 aa13.51□□□□□ -0.25
SGPP1-201ENST00000247225 BSPH1Q075Z2 132 aa13.51□□□□□ -0.25
SGPP1-201ENST00000247225 AP1S3Q96PC3 154 aa13.51□□□□□ -0.25
SGPP1-201ENST00000247225 IGF2RP11717 2491 aa13.51□□□□□ -0.25
SGPP1-201ENST00000247225 LOC105371242A0A075B767 164 aa13.51□□□□□ -0.25
SGPP1-201ENST00000247225 FTH1P19P0C7X4 201 aa13.51□□□□□ -0.25
SGPP1-201ENST00000247225 GUSBP1Q15486 140 aa13.51□□□□□ -0.25
SGPP1-201ENST00000247225 VSTM2AQ8TAG5 236 aa13.51□□□□□ -0.25
SGPP1-201ENST00000247225 C18orf15Q96N68 181 aa13.51□□□□□ -0.25
SGPP1-201ENST00000247225 HIGD1AQ9Y241 93 aa13.51□□□□□ -0.25
SGPP1-201ENST00000247225 SMKR1H3BMG3 65 aa13.5□□□□□ -0.25
SGPP1-201ENST00000247225 LY6HO94772 140 aa13.5□□□□□ -0.25
SGPP1-201ENST00000247225 FCGR2BP31994 310 aaPredicted RBP13.5□□□□□ -0.25
SGPP1-201ENST00000247225 PRSS57Q6UWY2 283 aa13.5□□□□□ -0.25
SGPP1-201ENST00000247225 OR4F17Q8NGA8 305 aa13.5□□□□□ -0.25
SGPP1-201ENST00000247225 CHRDL1Q9BU40 450 aa13.5□□□□□ -0.25
SGPP1-201ENST00000247225 CR1LQ2VPA4 569 aa13.5□□□□□ -0.25
SGPP1-201ENST00000247225 RBPMS2Q6ZRY4 209 aaKnown RBP13.5□□□□□ -0.25
SGPP1-201ENST00000247225 MRPS16Q9Y3D3 137 aaKnown RBP13.5□□□□□ -0.25
SGPP1-201ENST00000247225 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.5□□□□□ -0.25
SGPP1-201ENST00000247225 TMEM108Q6UXF1 575 aa13.49□□□□□ -0.25
SGPP1-201ENST00000247225 PSMB11A5LHX3 300 aa13.49□□□□□ -0.25
SGPP1-201ENST00000247225 FBLL1A6NHQ2 334 aaKnown RBP13.49□□□□□ -0.25
SGPP1-201ENST00000247225 C5orf17Q8NAS9 161 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms