RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 KLRD1Q13241 179 aa12.02□□□□□ -0.48
UBE2D4-201ENST00000222402 ECSCRQ19T08 205 aa12.02□□□□□ -0.48
UBE2D4-201ENST00000222402 F11RQ9Y624 299 aaKnown RBP12.02□□□□□ -0.48
UBE2D4-201ENST00000222402 NCOR2Q9Y618 2525 aa12.02□□□□□ -0.49
UBE2D4-201ENST00000222402 SHISA9B4DS77 424 aa12.02□□□□□ -0.49
UBE2D4-201ENST00000222402 S100A7P31151 101 aa12.02□□□□□ -0.49
UBE2D4-201ENST00000222402 CCDC144NLQ6NUI1 221 aa12.02□□□□□ -0.49
UBE2D4-201ENST00000222402 Q6ZWC4 215 aa12.02□□□□□ -0.49
UBE2D4-201ENST00000222402 TSKUQ8WUA8 353 aa12.02□□□□□ -0.49
UBE2D4-201ENST00000222402 C1orf159Q96HA4 380 aa12.02□□□□□ -0.49
UBE2D4-201ENST00000222402 M0QZK8 103 aa12.02□□□□□ -0.49
UBE2D4-201ENST00000222402 FAM168AQ92567 244 aa12.02□□□□□ -0.49
UBE2D4-201ENST00000222402 ZNF503Q96F45 646 aa12.02□□□□□ -0.49
UBE2D4-201ENST00000222402 MRPL36Q9P0J6 103 aaKnown RBP12.02□□□□□ -0.49
UBE2D4-201ENST00000222402 TET2Q6N021 2002 aaPredicted RBP12.01□□□□□ -0.49
UBE2D4-201ENST00000222402 RPLP1P05386 114 aaKnown RBP12.01□□□□□ -0.49
UBE2D4-201ENST00000222402 MFAP4P55083 255 aa12.01□□□□□ -0.49
UBE2D4-201ENST00000222402 TMEM136Q6ZRR5 245 aa12.01□□□□□ -0.49
UBE2D4-201ENST00000222402 FMC1Q96HJ9 113 aa12.01□□□□□ -0.49
UBE2D4-201ENST00000222402 NBR2O15453 112 aa12.01□□□□□ -0.49
UBE2D4-201ENST00000222402 RIGQ13278 110 aa12.01□□□□□ -0.49
UBE2D4-201ENST00000222402 OR10J3Q5JRS4 329 aa12.01□□□□□ -0.49
UBE2D4-201ENST00000222402 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.01□□□□□ -0.49
UBE2D4-201ENST00000222402 GPX1P07203 203 aa12.01□□□□□ -0.49
UBE2D4-201ENST00000222402 PATE2Q6UY27 113 aa12□□□□□ -0.49
UBE2D4-201ENST00000222402 NDFIP1Q9BT67 221 aa12□□□□□ -0.49
UBE2D4-201ENST00000222402 RAXQ9Y2V3 346 aa12□□□□□ -0.49
UBE2D4-201ENST00000222402 EREGO14944 169 aa12□□□□□ -0.49
UBE2D4-201ENST00000222402 GRNP28799 593 aaKnown RBP12□□□□□ -0.49
UBE2D4-201ENST00000222402 IGLC7A0M8Q6 106 aa12□□□□□ -0.49
UBE2D4-201ENST00000222402 BMPR1BO00238 502 aa12□□□□□ -0.49
UBE2D4-201ENST00000222402 OR2J3O76001 311 aa12□□□□□ -0.49
UBE2D4-201ENST00000222402 TCRAP04437 139 aa12□□□□□ -0.49
UBE2D4-201ENST00000222402 TDGF1P3P51864 188 aa12□□□□□ -0.49
UBE2D4-201ENST00000222402 BEND2Q8NDZ0 799 aa12□□□□□ -0.49
UBE2D4-201ENST00000222402 FAM167A-AS1Q96KT0 104 aa12□□□□□ -0.49
UBE2D4-201ENST00000222402 SLC25A39Q9BZJ4 359 aaPredicted RBP12□□□□□ -0.49
UBE2D4-201ENST00000222402 LINC00574Q9H8X3 128 aa12□□□□□ -0.49
UBE2D4-201ENST00000222402 KAAG1Q9UBP8 84 aa12□□□□□ -0.49
UBE2D4-201ENST00000222402 UCNP55089 124 aa11.99□□□□□ -0.49
UBE2D4-201ENST00000222402 Q0VG73 95 aa11.99□□□□□ -0.49
UBE2D4-201ENST00000222402 CIARTQ8N365 385 aaPredicted RBP11.99□□□□□ -0.49
UBE2D4-201ENST00000222402 FXYD5Q96DB9 178 aa11.99□□□□□ -0.49
UBE2D4-201ENST00000222402 K7ENP7 123 aa11.99□□□□□ -0.49
UBE2D4-201ENST00000222402 Q8NA96 180 aa11.99□□□□□ -0.49
UBE2D4-201ENST00000222402 MIEN1Q9BRT3 115 aa11.99□□□□□ -0.49
UBE2D4-201ENST00000222402 OTORQ9NRC9 128 aa11.99□□□□□ -0.49
UBE2D4-201ENST00000222402 WDFY3Q8IZQ1 3526 aa11.99□□□□□ -0.49
UBE2D4-201ENST00000222402 KLRB1Q12918 225 aa11.99□□□□□ -0.49
UBE2D4-201ENST00000222402 IGFBPL1Q8WX77 278 aa11.99□□□□□ -0.49
UBE2D4-201ENST00000222402 RNF125Q96EQ8 232 aa11.99□□□□□ -0.49
UBE2D4-201ENST00000222402 ASCL2Q99929 193 aa11.99□□□□□ -0.49
UBE2D4-201ENST00000222402 C1RLQ9NZP8 487 aa11.99□□□□□ -0.49
UBE2D4-201ENST00000222402 LEPROTL1O95214 131 aa11.98□□□□□ -0.49
UBE2D4-201ENST00000222402 HLA-DRB1P01911 266 aa11.98□□□□□ -0.49
UBE2D4-201ENST00000222402 SLAQ13239 276 aa11.98□□□□□ -0.49
UBE2D4-201ENST00000222402 UQCR10Q9UDW1 63 aa11.98□□□□□ -0.49
UBE2D4-201ENST00000222402 FBXL7Q9UJT9 491 aa11.98□□□□□ -0.49
UBE2D4-201ENST00000222402 RBPMS2Q6ZRY4 209 aaKnown RBP11.98□□□□□ -0.49
UBE2D4-201ENST00000222402 MUC3AQ02505 3323 aa11.98□□□□□ -0.49
UBE2D4-201ENST00000222402 ARHGAP32A7KAX9 2087 aa11.98□□□□□ -0.49
UBE2D4-201ENST00000222402 LCN12Q6JVE5 192 aa11.97□□□□□ -0.49
UBE2D4-201ENST00000222402 THAP8Q8NA92 274 aa11.97□□□□□ -0.49
UBE2D4-201ENST00000222402 RCHY1Q96PM5 261 aa11.97□□□□□ -0.49
UBE2D4-201ENST00000222402 A0A1W2PS18 150 aa11.97□□□□□ -0.49
UBE2D4-201ENST00000222402 C22orf46C9J442 243 aa11.97□□□□□ -0.49
UBE2D4-201ENST00000222402 PMCHL1Q16048 86 aa11.97□□□□□ -0.49
UBE2D4-201ENST00000222402 TPTE2P1Q5T6R2 138 aa11.97□□□□□ -0.49
UBE2D4-201ENST00000222402 MUC21A0A0G2JKD1 596 aa11.97□□□□□ -0.49
UBE2D4-201ENST00000222402 MUC21A0A140T8X8 626 aa11.97□□□□□ -0.49
UBE2D4-201ENST00000222402 LOC389332A0A1B0GUA5 103 aa11.97□□□□□ -0.49
UBE2D4-201ENST00000222402 ORM1P02763 201 aa11.97□□□□□ -0.49
UBE2D4-201ENST00000222402 C3orf79P0CE67 100 aa11.97□□□□□ -0.49
UBE2D4-201ENST00000222402 MUC21Q5SSG8 566 aa11.97□□□□□ -0.49
UBE2D4-201ENST00000222402 IGLV2-23P01705 113 aa11.96□□□□□ -0.49
UBE2D4-201ENST00000222402 RPL11P62913 178 aaKnown RBP11.96□□□□□ -0.49
UBE2D4-201ENST00000222402 ARPC1AQ92747 370 aa11.96□□□□□ -0.49
UBE2D4-201ENST00000222402 TMEM191AQ9H0A3 160 aa11.96□□□□□ -0.49
UBE2D4-201ENST00000222402 C21orf62Q9NYP8 219 aa11.96□□□□□ -0.49
UBE2D4-201ENST00000222402 TRAV30A0A087WSZ9 112 aa11.96□□□□□ -0.49
UBE2D4-201ENST00000222402 SMIM27A0A1W2PRY6 76 aa11.96□□□□□ -0.49
UBE2D4-201ENST00000222402 UNQ5815/PRO19632Q6UWF5 114 aa11.96□□□□□ -0.49
UBE2D4-201ENST00000222402 C2orf88Q9BSF0 95 aa11.96□□□□□ -0.49
UBE2D4-201ENST00000222402 BOD1L1Q8NFC6 3051 aa11.96□□□□□ -0.49
UBE2D4-201ENST00000222402 IGHV3OR16-13A0A075B7E8 117 aa11.96□□□□□ -0.5
UBE2D4-201ENST00000222402 IGHV3-74A0A0B4J1X5 117 aa11.96□□□□□ -0.5
UBE2D4-201ENST00000222402 HINT1P49773 126 aaPredicted RBP11.96□□□□□ -0.5
UBE2D4-201ENST00000222402 MAP1LC3CQ9BXW4 147 aa11.96□□□□□ -0.5
UBE2D4-201ENST00000222402 M0QZ24 198 aa11.95□□□□□ -0.5
UBE2D4-201ENST00000222402 BTF3P20290 206 aaKnown RBP11.95□□□□□ -0.5
UBE2D4-201ENST00000222402 COL5A1-AS1Q5SY13 56 aa11.95□□□□□ -0.5
UBE2D4-201ENST00000222402 TMEM116Q8NCL8 245 aa11.95□□□□□ -0.5
UBE2D4-201ENST00000222402 ST6GALNAC6Q969X2 333 aa11.95□□□□□ -0.5
UBE2D4-201ENST00000222402 CLEC5AQ9NY25 188 aa11.95□□□□□ -0.5
UBE2D4-201ENST00000222402 TMEM189A5PLL7 270 aa11.95□□□□□ -0.5
UBE2D4-201ENST00000222402 C18orf32Q8TCD1 76 aa11.95□□□□□ -0.5
UBE2D4-201ENST00000222402 SNHG12Q9BXW3 62 aa11.95□□□□□ -0.5
UBE2D4-201ENST00000222402 SPTBN4Q9H254 2564 aa11.95□□□□□ -0.5
UBE2D4-201ENST00000222402 A0A1B0GUT8 65 aa11.95□□□□□ -0.5
UBE2D4-201ENST00000222402 OR2T8A6NH00 312 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms