RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 SpenQ62504 3644 aaKnown RBP11.33□□□□□ -0.6
Nup88-201ENSMUST00000035283 Tanc2A2A690 1994 aa11.33□□□□□ -0.6
Nup88-201ENSMUST00000035283 Myo9bQ9QY06 2114 aa11.33□□□□□ -0.6
Nup88-201ENSMUST00000035283 Gm20877J3QPZ4 227 aa11.32□□□□□ -0.6
Nup88-201ENSMUST00000035283 Gm3486L7N2D0 199 aa11.32□□□□□ -0.6
Nup88-201ENSMUST00000035283 Iglc2P01844 104 aa11.32□□□□□ -0.6
Nup88-201ENSMUST00000035283 Fabp4P04117 132 aa11.32□□□□□ -0.6
Nup88-201ENSMUST00000035283 Ren1P06281 402 aa11.32□□□□□ -0.6
Nup88-201ENSMUST00000035283 Prss2P07146 246 aa11.32□□□□□ -0.6
Nup88-201ENSMUST00000035283 Fam57aQ5ND56 257 aa11.32□□□□□ -0.6
Nup88-201ENSMUST00000035283 Zc3h3Q8CHP0 950 aa11.32□□□□□ -0.6
Nup88-201ENSMUST00000035283 RetnlgQ8K426 117 aa11.32□□□□□ -0.6
Nup88-201ENSMUST00000035283 Thoc3Q8VE80 351 aa11.32□□□□□ -0.6
Nup88-201ENSMUST00000035283 Olfr509Q8VF20 321 aa11.32□□□□□ -0.6
Nup88-201ENSMUST00000035283 Pth2Q91W27 100 aa11.32□□□□□ -0.6
Nup88-201ENSMUST00000035283 Cisd2Q9CQB5 135 aaKnown RBP11.32□□□□□ -0.6
Nup88-201ENSMUST00000035283 Pus1Q9WU56 423 aa11.32□□□□□ -0.6
Nup88-201ENSMUST00000035283 Olfr573-ps1A0A1B0GRU2 297 aa11.32□□□□□ -0.6
Nup88-201ENSMUST00000035283 Vmn1r167G3UW71 315 aa11.32□□□□□ -0.6
Nup88-201ENSMUST00000035283 Lin7cO88952 197 aaKnown RBP11.32□□□□□ -0.6
Nup88-201ENSMUST00000035283 Gdf1P20863 357 aa11.32□□□□□ -0.6
Nup88-201ENSMUST00000035283 Olfr1537P34983 314 aa11.32□□□□□ -0.6
Nup88-201ENSMUST00000035283 CxadrP97792 365 aa11.32□□□□□ -0.6
Nup88-201ENSMUST00000035283 Zglp1Q1WG82 266 aa11.32□□□□□ -0.6
Nup88-201ENSMUST00000035283 Spock1Q62288 442 aa11.32□□□□□ -0.6
Nup88-201ENSMUST00000035283 Olfr1230Q8VG58 305 aa11.32□□□□□ -0.6
Nup88-201ENSMUST00000035283 Scgb1b27Q91WB5 92 aa11.32□□□□□ -0.6
Nup88-201ENSMUST00000035283 D730048I06RikQ9CQB8 106 aa11.32□□□□□ -0.6
Nup88-201ENSMUST00000035283 Tbx21Q9JKD8 530 aa11.32□□□□□ -0.6
Nup88-201ENSMUST00000035283 Olfr178E9Q9T3 319 aa11.31□□□□□ -0.6
Nup88-201ENSMUST00000035283 Tesk1O70146 627 aa11.31□□□□□ -0.6
Nup88-201ENSMUST00000035283 PtcraP0C6B2 199 aa11.31□□□□□ -0.6
Nup88-201ENSMUST00000035283 Cox5aP12787 146 aa11.31□□□□□ -0.6
Nup88-201ENSMUST00000035283 OsmP53347 263 aa11.31□□□□□ -0.6
Nup88-201ENSMUST00000035283 Rpl30P62889 115 aaKnown RBP11.31□□□□□ -0.6
Nup88-201ENSMUST00000035283 Gng3P63216 75 aa11.31□□□□□ -0.6
Nup88-201ENSMUST00000035283 Wfdc9Q3UW41 83 aa11.31□□□□□ -0.6
Nup88-201ENSMUST00000035283 C1qtnf9Q4ZJN1 333 aa11.31□□□□□ -0.6
Nup88-201ENSMUST00000035283 Trp53rkaQ5U452 244 aa11.31□□□□□ -0.6
Nup88-201ENSMUST00000035283 Tspan7Q62283 249 aa11.31□□□□□ -0.6
Nup88-201ENSMUST00000035283 Prss45Q8K4I7 317 aa11.31□□□□□ -0.6
Nup88-201ENSMUST00000035283 Olfr490Q8VFD2 314 aa11.31□□□□□ -0.6
Nup88-201ENSMUST00000035283 Olfr1446Q8VFX4 308 aa11.31□□□□□ -0.6
Nup88-201ENSMUST00000035283 Olfr338Q8VGK6 306 aa11.31□□□□□ -0.6
Nup88-201ENSMUST00000035283 Tp53rkQ99PW4 244 aa11.31□□□□□ -0.6
Nup88-201ENSMUST00000035283 PigcQ9CXR4 297 aa11.31□□□□□ -0.6
Nup88-201ENSMUST00000035283 Rnf115Q9D0C1 305 aa11.31□□□□□ -0.6
Nup88-201ENSMUST00000035283 Nek7Q9ES74 302 aa11.31□□□□□ -0.6
Nup88-201ENSMUST00000035283 Clec4eQ9R0Q8 214 aa11.31□□□□□ -0.6
Nup88-201ENSMUST00000035283 Scgb1b10A0A087WPW0 93 aa11.31□□□□□ -0.6
Nup88-201ENSMUST00000035283 1700025C18RikA2A580 89 aa11.31□□□□□ -0.6
Nup88-201ENSMUST00000035283 MsmpB1AWI6 139 aa11.31□□□□□ -0.6
Nup88-201ENSMUST00000035283 9130019O22RikG3X941 543 aa11.31□□□□□ -0.6
Nup88-201ENSMUST00000035283 Gm20830J3KML6 227 aa11.31□□□□□ -0.6
Nup88-201ENSMUST00000035283 KrasP32883 189 aa11.31□□□□□ -0.6
Nup88-201ENSMUST00000035283 Cd81P35762 236 aa11.31□□□□□ -0.6
Nup88-201ENSMUST00000035283 Pax5Q02650 391 aa11.31□□□□□ -0.6
Nup88-201ENSMUST00000035283 Sf3a2Q62203 475 aaKnown RBP11.31□□□□□ -0.6
Nup88-201ENSMUST00000035283 Msl2Q69ZF8 577 aa11.31□□□□□ -0.6
Nup88-201ENSMUST00000035283 Arl11Q6P3A9 176 aa11.31□□□□□ -0.6
Nup88-201ENSMUST00000035283 Zfp799Q8BHK4 648 aa11.31□□□□□ -0.6
Nup88-201ENSMUST00000035283 Slc24a5Q8C261 501 aa11.31□□□□□ -0.6
Nup88-201ENSMUST00000035283 Phf13Q8K2W6 296 aa11.31□□□□□ -0.6
Nup88-201ENSMUST00000035283 B4galt7Q8R087 327 aa11.31□□□□□ -0.6
Nup88-201ENSMUST00000035283 Olfr1370Q8VFG4 316 aa11.31□□□□□ -0.6
Nup88-201ENSMUST00000035283 Olfr473Q8VG44 310 aa11.31□□□□□ -0.6
Nup88-201ENSMUST00000035283 Olfr1339Q8VGB1 315 aa11.31□□□□□ -0.6
Nup88-201ENSMUST00000035283 Tmbim7Q9D592 302 aa11.31□□□□□ -0.6
Nup88-201ENSMUST00000035283 Cox20Q9D7J4 117 aa11.31□□□□□ -0.6
Nup88-201ENSMUST00000035283 NgbQ9ER97 151 aa11.31□□□□□ -0.6
Nup88-201ENSMUST00000035283 Usf3B2RUQ2 2221 aa11.3□□□□□ -0.6
Nup88-201ENSMUST00000035283 Gm10778A0A087WNP5 499 aa11.3□□□□□ -0.6
Nup88-201ENSMUST00000035283 Igkv13-84A0A140T8N3 115 aa11.3□□□□□ -0.6
Nup88-201ENSMUST00000035283 Lrrc3cA0A1B0GRI5 255 aa11.3□□□□□ -0.6
Nup88-201ENSMUST00000035283 Ctxnd1A0A1B0GST9 59 aa11.3□□□□□ -0.6
Nup88-201ENSMUST00000035283 Gm9376G3UW68 176 aa11.3□□□□□ -0.6
Nup88-201ENSMUST00000035283 Olfr191L7N1Z8 309 aa11.3□□□□□ -0.6
Nup88-201ENSMUST00000035283 Atpif1O35143 106 aa11.3□□□□□ -0.6
Nup88-201ENSMUST00000035283 Nkx2-8O70584 235 aa11.3□□□□□ -0.6
Nup88-201ENSMUST00000035283 Dpagt1P42867 410 aa11.3□□□□□ -0.6
Nup88-201ENSMUST00000035283 Ube2g2P60605 165 aa11.3□□□□□ -0.6
Nup88-201ENSMUST00000035283 Reg2Q08731 173 aa11.3□□□□□ -0.6
Nup88-201ENSMUST00000035283 Npy6rQ61212 371 aa11.3□□□□□ -0.6
Nup88-201ENSMUST00000035283 Paqr8Q80ZE5 354 aa11.3□□□□□ -0.6
Nup88-201ENSMUST00000035283 Megf9Q8BH27 600 aa11.3□□□□□ -0.6
Nup88-201ENSMUST00000035283 Neil3Q8K203 606 aaKnown RBP11.3□□□□□ -0.6
Nup88-201ENSMUST00000035283 Prelid1Q8R107 217 aa11.3□□□□□ -0.6
Nup88-201ENSMUST00000035283 Ythdf2Q91YT7 579 aaKnown RBP11.3□□□□□ -0.6
Nup88-201ENSMUST00000035283 Tmem70Q921N7 253 aa11.3□□□□□ -0.6
Nup88-201ENSMUST00000035283 Bbc3Q99ML1 193 aa11.3□□□□□ -0.6
Nup88-201ENSMUST00000035283 Olfr588-ps1A0A1B0GSZ2 313 aa11.3□□□□□ -0.6
Nup88-201ENSMUST00000035283 Zfp972A2AW65 139 aa11.3□□□□□ -0.6
Nup88-201ENSMUST00000035283 StomP54116 284 aa11.3□□□□□ -0.6
Nup88-201ENSMUST00000035283 Tpt1P63028 172 aaKnown RBP11.3□□□□□ -0.6
Nup88-201ENSMUST00000035283 Pip5k1aP70182 546 aa11.3□□□□□ -0.6
Nup88-201ENSMUST00000035283 Ccl7Q03366 97 aa11.3□□□□□ -0.6
Nup88-201ENSMUST00000035283 Ube2zQ3UE37 356 aa11.3□□□□□ -0.6
Nup88-201ENSMUST00000035283 Spata22Q5SV06 358 aa11.3□□□□□ -0.6
Nup88-201ENSMUST00000035283 Adora3Q61618 319 aa11.3□□□□□ -0.6
Nup88-201ENSMUST00000035283 Iqcf4Q6P8Y2 204 aa11.3□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 162.7 ms