RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 OR5G3P0C626 314 aa13.53□□□□□ -0.24
PHGDH-234ENST00000642041 AREGP15514 252 aa13.53□□□□□ -0.24
PHGDH-234ENST00000642041 MFAP4P55083 255 aa13.53□□□□□ -0.24
PHGDH-234ENST00000642041 DEFA5Q01523 94 aa13.53□□□□□ -0.24
PHGDH-234ENST00000642041 FAM110DQ8TAY7 271 aaPredicted RBP13.53□□□□□ -0.24
PHGDH-234ENST00000642041 SSX3Q99909 188 aa13.53□□□□□ -0.24
PHGDH-234ENST00000642041 TCEAL7Q9BRU2 100 aa13.53□□□□□ -0.24
PHGDH-234ENST00000642041 SLC25A33Q9BSK2 321 aa13.53□□□□□ -0.24
PHGDH-234ENST00000642041 SCRT1Q9BWW7 348 aa13.53□□□□□ -0.24
PHGDH-234ENST00000642041 VSIRQ9H7M9 311 aa13.53□□□□□ -0.24
PHGDH-234ENST00000642041 GNG13Q9P2W3 67 aa13.53□□□□□ -0.24
PHGDH-234ENST00000642041 B4DEV8 164 aa13.52□□□□□ -0.25
PHGDH-234ENST00000642041 F6UZH7 168 aa13.52□□□□□ -0.25
PHGDH-234ENST00000642041 I3L2K1 104 aa13.52□□□□□ -0.25
PHGDH-234ENST00000642041 YIF1AO95070 293 aa13.52□□□□□ -0.25
PHGDH-234ENST00000642041 LINC00869P0C866 280 aa13.52□□□□□ -0.25
PHGDH-234ENST00000642041 IGHV4-38-2P0DP08 117 aa13.52□□□□□ -0.25
PHGDH-234ENST00000642041 RND2P52198 227 aa13.52□□□□□ -0.25
PHGDH-234ENST00000642041 MEF2BQ02080 365 aaPredicted RBP13.52□□□□□ -0.25
PHGDH-234ENST00000642041 ZNF726P1Q15940 193 aa13.52□□□□□ -0.25
PHGDH-234ENST00000642041 FNDC4Q9H6D8 234 aaPredicted RBP13.52□□□□□ -0.25
PHGDH-234ENST00000642041 IGHV3OR16-10A0A075B7F0 116 aa13.51□□□□□ -0.25
PHGDH-234ENST00000642041 IGHV7-81A0A0B4J1V7 117 aa13.51□□□□□ -0.25
PHGDH-234ENST00000642041 COX7A2P2O60397 106 aa13.51□□□□□ -0.25
PHGDH-234ENST00000642041 C8orf88P0DMB2 117 aa13.51□□□□□ -0.25
PHGDH-234ENST00000642041 YPEL3P61236 119 aaPredicted RBP13.51□□□□□ -0.25
PHGDH-234ENST00000642041 KLF17Q5JT82 389 aaPredicted RBP13.51□□□□□ -0.25
PHGDH-234ENST00000642041 FAM78BQ5VT40 261 aa13.51□□□□□ -0.25
PHGDH-234ENST00000642041 RUSC1-AS1Q66K80 236 aa13.51□□□□□ -0.25
PHGDH-234ENST00000642041 C5orf56Q8N8D9 126 aa13.51□□□□□ -0.25
PHGDH-234ENST00000642041 UHRF2Q96PU4 802 aa13.51□□□□□ -0.25
PHGDH-234ENST00000642041 SLC25A22Q9H936 323 aa13.51□□□□□ -0.25
PHGDH-234ENST00000642041 IGLV11-55A0A075B6I3 123 aa13.5□□□□□ -0.25
PHGDH-234ENST00000642041 SRP19P09132 144 aaKnown RBP13.5□□□□□ -0.25
PHGDH-234ENST00000642041 SSBP2P81877 361 aaPredicted RBP13.5□□□□□ -0.25
PHGDH-234ENST00000642041 ICAM4Q14773 271 aa13.5□□□□□ -0.25
PHGDH-234ENST00000642041 HAGHQ16775 308 aa13.5□□□□□ -0.25
PHGDH-234ENST00000642041 C10orf113Q5VZT2 155 aa13.5□□□□□ -0.25
PHGDH-234ENST00000642041 BRD3OSQ6XYD6 125 aa13.5□□□□□ -0.25
PHGDH-234ENST00000642041 OR2T6Q8NHC8 308 aa13.5□□□□□ -0.25
PHGDH-234ENST00000642041 RPUSD4Q96CM3 377 aaKnown RBP13.5□□□□□ -0.25
PHGDH-234ENST00000642041 NIPSNAP3BQ9BS92 247 aa13.5□□□□□ -0.25
PHGDH-234ENST00000642041 HYPMO75409 117 aa13.49□□□□□ -0.25
PHGDH-234ENST00000642041 CCL20P78556 96 aa13.49□□□□□ -0.25
PHGDH-234ENST00000642041 RHEBQ15382 184 aa13.49□□□□□ -0.25
PHGDH-234ENST00000642041 RFNGQ9Y644 331 aa13.49□□□□□ -0.25
PHGDH-234ENST00000642041 IGKV1OR2-108A0A075B7D4 117 aa13.48□□□□□ -0.25
PHGDH-234ENST00000642041 A0A0U1RQK1 487 aa13.48□□□□□ -0.25
PHGDH-234ENST00000642041 A6NDX4 124 aa13.48□□□□□ -0.25
PHGDH-234ENST00000642041 IGF1P05019 195 aa13.48□□□□□ -0.25
PHGDH-234ENST00000642041 REG1AP05451 166 aa13.48□□□□□ -0.25
PHGDH-234ENST00000642041 RAB9AP51151 201 aa13.48□□□□□ -0.25
PHGDH-234ENST00000642041 BEAN1Q3B7T3 259 aa13.48□□□□□ -0.25
PHGDH-234ENST00000642041 UNQ5815/PRO19632Q6UWF5 114 aa13.48□□□□□ -0.25
PHGDH-234ENST00000642041 BCL6BQ8N143 479 aaPredicted RBP13.48□□□□□ -0.25
PHGDH-234ENST00000642041 NECAP1Q8NC96 275 aa13.48□□□□□ -0.25
PHGDH-234ENST00000642041 OR51G1Q8NGK1 321 aa13.48□□□□□ -0.25
PHGDH-234ENST00000642041 RXFP4Q8TDU9 374 aa13.48□□□□□ -0.25
PHGDH-234ENST00000642041 Q8WTZ3 238 aa13.48□□□□□ -0.25
PHGDH-234ENST00000642041 C17orf50Q8WW18 174 aa13.48□□□□□ -0.25
PHGDH-234ENST00000642041 TRBV7-1A0A0A6YYK4 115 aa13.47□□□□□ -0.25
PHGDH-234ENST00000642041 A0A1W2PRE2 83 aa13.47□□□□□ -0.25
PHGDH-234ENST00000642041 FAM223BA6NKX1 122 aa13.47□□□□□ -0.25
PHGDH-234ENST00000642041 GNG7O60262 68 aa13.47□□□□□ -0.25
PHGDH-234ENST00000642041 CD24P25063 80 aa13.47□□□□□ -0.25
PHGDH-234ENST00000642041 GCHFRP30047 84 aa13.47□□□□□ -0.25
PHGDH-234ENST00000642041 REC114Q7Z4M0 266 aa13.47□□□□□ -0.25
PHGDH-234ENST00000642041 FAM223AQ8IWN6 122 aa13.47□□□□□ -0.25
PHGDH-234ENST00000642041 PRDM13Q9H4Q3 707 aa13.47□□□□□ -0.25
PHGDH-234ENST00000642041 TMEM231Q9H6L2 316 aa13.47□□□□□ -0.25
PHGDH-234ENST00000642041 TUBA4BQ9H853 241 aa13.47□□□□□ -0.25
PHGDH-234ENST00000642041 C21orf62Q9NYP8 219 aa13.47□□□□□ -0.25
PHGDH-234ENST00000642041 K7EIM0 57 aa13.46□□□□□ -0.25
PHGDH-234ENST00000642041 TOMM40O96008 361 aa13.46□□□□□ -0.25
PHGDH-234ENST00000642041 IGHG2P01859 326 aa13.46□□□□□ -0.25
PHGDH-234ENST00000642041 IGLC1P0CG04 106 aa13.46□□□□□ -0.25
PHGDH-234ENST00000642041 RD3LP0DJH9 198 aa13.46□□□□□ -0.25
PHGDH-234ENST00000642041 MFAP2P55001 183 aa13.46□□□□□ -0.25
PHGDH-234ENST00000642041 SRSF3P84103 164 aaKnown RBP13.46□□□□□ -0.25
PHGDH-234ENST00000642041 MLANAQ16655 118 aa13.46□□□□□ -0.25
PHGDH-234ENST00000642041 IQCF2Q8IXL9 164 aa13.46□□□□□ -0.25
PHGDH-234ENST00000642041 CLRN3Q8NCR9 226 aa13.46□□□□□ -0.25
PHGDH-234ENST00000642041 OR4F5Q8NH21 305 aa13.46□□□□□ -0.25
PHGDH-234ENST00000642041 PIFOQ8TCI5 191 aa13.46□□□□□ -0.25
PHGDH-234ENST00000642041 TVP23CQ96ET8 276 aa13.46□□□□□ -0.25
PHGDH-234ENST00000642041 RARRES2Q99969 163 aa13.46□□□□□ -0.25
PHGDH-234ENST00000642041 EPPK1P58107 5090 aaKnown RBP13.45□□□□□ -0.26
PHGDH-234ENST00000642041 IGKV1D-37A0A075B6S9 117 aa13.45□□□□□ -0.26
PHGDH-234ENST00000642041 A0A1B0GV50 99 aa13.45□□□□□ -0.26
PHGDH-234ENST00000642041 AP4M1O00189 453 aa13.45□□□□□ -0.26
PHGDH-234ENST00000642041 FGF8P55075 233 aaPredicted RBP13.45□□□□□ -0.26
PHGDH-234ENST00000642041 KPRPQ5T749 579 aaPredicted RBP13.45□□□□□ -0.26
PHGDH-234ENST00000642041 TMEM86BQ8N661 226 aa13.45□□□□□ -0.26
PHGDH-234ENST00000642041 USMG5Q96IX5 58 aa13.45□□□□□ -0.26
PHGDH-234ENST00000642041 FANCD2OSQ96PS1 177 aa13.45□□□□□ -0.26
PHGDH-234ENST00000642041 SEPSECSQ9HD40 501 aaKnown RBP13.45□□□□□ -0.26
PHGDH-234ENST00000642041 A0A087WWC5 75 aa13.44□□□□□ -0.26
PHGDH-234ENST00000642041 TRBV9A0A0B4J1U6 114 aa13.44□□□□□ -0.26
PHGDH-234ENST00000642041 PSMB11A5LHX3 300 aa13.44□□□□□ -0.26
PHGDH-234ENST00000642041 C11orf94C9JXX5 98 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms