RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 SLC25A33Q9BSK2 321 aa11.17□□□□□ -0.62
SCARB2-227ENST00000640957 COMMD5Q9GZQ3 224 aa11.17□□□□□ -0.62
SCARB2-227ENST00000640957 NMUP48645 174 aa11.17□□□□□ -0.62
SCARB2-227ENST00000640957 HSPE1P61604 102 aaKnown RBP11.17□□□□□ -0.62
SCARB2-227ENST00000640957 GUSBP1Q15486 140 aa11.17□□□□□ -0.62
SCARB2-227ENST00000640957 FER1L6-AS2Q96M78 137 aa11.17□□□□□ -0.62
SCARB2-227ENST00000640957 OR2V2Q96R30 315 aa11.17□□□□□ -0.62
SCARB2-227ENST00000640957 MAP1LC3CQ9BXW4 147 aa11.17□□□□□ -0.62
SCARB2-227ENST00000640957 PEF1Q9UBV8 284 aaKnown RBP11.17□□□□□ -0.62
SCARB2-227ENST00000640957 SS18L1O75177 396 aaPredicted RBP11.16□□□□□ -0.62
SCARB2-227ENST00000640957 SAA2P0DJI9 122 aaPredicted RBP11.16□□□□□ -0.62
SCARB2-227ENST00000640957 PRDX2P32119 198 aa11.16□□□□□ -0.62
SCARB2-227ENST00000640957 RUSC1-AS1Q66K80 236 aa11.16□□□□□ -0.62
SCARB2-227ENST00000640957 NPIPB3Q92617 1050 aa11.16□□□□□ -0.62
SCARB2-227ENST00000640957 PAXXQ9BUH6 204 aa11.16□□□□□ -0.62
SCARB2-227ENST00000640957 IDI2-AS1Q9NZ38 188 aa11.16□□□□□ -0.62
SCARB2-227ENST00000640957 PEX7O00628 323 aa11.16□□□□□ -0.62
SCARB2-227ENST00000640957 COX7A2P2O60397 106 aa11.16□□□□□ -0.62
SCARB2-227ENST00000640957 HIST1H1EP10412 219 aaKnown RBP11.16□□□□□ -0.62
SCARB2-227ENST00000640957 LOXL1Q08397 574 aaPredicted RBP11.16□□□□□ -0.62
SCARB2-227ENST00000640957 Q8IYB0 196 aa11.16□□□□□ -0.62
SCARB2-227ENST00000640957 CIARTQ8N365 385 aaPredicted RBP11.16□□□□□ -0.62
SCARB2-227ENST00000640957 OR4S2Q8NH73 311 aa11.16□□□□□ -0.62
SCARB2-227ENST00000640957 SLC25A2Q9BXI2 301 aa11.16□□□□□ -0.62
SCARB2-227ENST00000640957 ST20Q9HBF5 79 aa11.16□□□□□ -0.62
SCARB2-227ENST00000640957 SCRT2Q9NQ03 307 aa11.16□□□□□ -0.62
SCARB2-227ENST00000640957 TNRC6AQ8NDV7 1962 aaKnown RBP11.16□□□□□ -0.62
SCARB2-227ENST00000640957 HLA-DRB1P01911 266 aa11.15□□□□□ -0.62
SCARB2-227ENST00000640957 TMEM249Q2WGJ8 235 aa11.15□□□□□ -0.62
SCARB2-227ENST00000640957 C15orf61A6NNL5 157 aa11.15□□□□□ -0.62
SCARB2-227ENST00000640957 NHLH1Q02575 133 aa11.15□□□□□ -0.62
SCARB2-227ENST00000640957 TMEM186Q96B77 213 aa11.15□□□□□ -0.62
SCARB2-227ENST00000640957 IFI27L2Q9H2X8 130 aa11.15□□□□□ -0.62
SCARB2-227ENST00000640957 MRPL36Q9P0J6 103 aaKnown RBP11.15□□□□□ -0.62
SCARB2-227ENST00000640957 RABAC1Q9UI14 185 aa11.15□□□□□ -0.62
SCARB2-227ENST00000640957 SERTM2A0A1B0GWG4 89 aa11.15□□□□□ -0.63
SCARB2-227ENST00000640957 C15orf65H3BRN8 121 aa11.15□□□□□ -0.63
SCARB2-227ENST00000640957 HBBP68871 147 aa11.15□□□□□ -0.63
SCARB2-227ENST00000640957 RTL8BQ17RB0 113 aa11.15□□□□□ -0.63
SCARB2-227ENST00000640957 TMEM97Q5BJF2 176 aa11.15□□□□□ -0.63
SCARB2-227ENST00000640957 FAM71F2Q6NXP2 309 aa11.15□□□□□ -0.63
SCARB2-227ENST00000640957 SPRR3Q9UBC9 169 aa11.15□□□□□ -0.63
SCARB2-227ENST00000640957 K7ERJ3 54 aa11.14□□□□□ -0.63
SCARB2-227ENST00000640957 CD5LO43866 347 aa11.14□□□□□ -0.63
SCARB2-227ENST00000640957 APOHP02749 345 aaPredicted RBP11.14□□□□□ -0.63
SCARB2-227ENST00000640957 TAS2R45P59539 299 aa11.14□□□□□ -0.63
SCARB2-227ENST00000640957 CT45A1Q5HYN5 189 aa11.14□□□□□ -0.63
SCARB2-227ENST00000640957 C2orf91Q6ZV80 131 aa11.14□□□□□ -0.63
SCARB2-227ENST00000640957 CT45A3Q8NHU0 189 aa11.14□□□□□ -0.63
SCARB2-227ENST00000640957 GRAMD2BQ96HH9 432 aa11.14□□□□□ -0.63
SCARB2-227ENST00000640957 NCOR2Q9Y618 2525 aa11.14□□□□□ -0.63
SCARB2-227ENST00000640957 M0R296 226 aa11.14□□□□□ -0.63
SCARB2-227ENST00000640957 OR5AL1P0C617 328 aa11.14□□□□□ -0.63
SCARB2-227ENST00000640957 PLP1P60201 277 aa11.14□□□□□ -0.63
SCARB2-227ENST00000640957 DEFB109BQ30KR1 87 aa11.14□□□□□ -0.63
SCARB2-227ENST00000640957 VWA1Q6PCB0 445 aa11.14□□□□□ -0.63
SCARB2-227ENST00000640957 SMIM12Q96EX1 92 aa11.14□□□□□ -0.63
SCARB2-227ENST00000640957 CYC1P08574 325 aa11.13□□□□□ -0.63
SCARB2-227ENST00000640957 SP9P0CG40 484 aa11.13□□□□□ -0.63
SCARB2-227ENST00000640957 KIR3DS1Q14943 382 aa11.13□□□□□ -0.63
SCARB2-227ENST00000640957 SMIM21Q3B7S5 101 aa11.13□□□□□ -0.63
SCARB2-227ENST00000640957 HCP5Q6MZN7 132 aa11.13□□□□□ -0.63
SCARB2-227ENST00000640957 LY96Q9Y6Y9 160 aa11.13□□□□□ -0.63
SCARB2-227ENST00000640957 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.13□□□□□ -0.63
SCARB2-227ENST00000640957 PRSS47A8MTI9 375 aa11.13□□□□□ -0.63
SCARB2-227ENST00000640957 PAX2Q02962 417 aa11.13□□□□□ -0.63
SCARB2-227ENST00000640957 LCNL1Q6ZST4 164 aa11.13□□□□□ -0.63
SCARB2-227ENST00000640957 ZNF329Q86UD4 541 aa11.13□□□□□ -0.63
SCARB2-227ENST00000640957 PCP2Q8IVA1 136 aa11.13□□□□□ -0.63
SCARB2-227ENST00000640957 DAZAP1Q96EP5 407 aaKnown RBP11.13□□□□□ -0.63
SCARB2-227ENST00000640957 FAM167A-AS1Q96KT0 104 aa11.13□□□□□ -0.63
SCARB2-227ENST00000640957 SPRY3O43610 288 aa11.13□□□□□ -0.63
SCARB2-227ENST00000640957 P01737 135 aa11.13□□□□□ -0.63
SCARB2-227ENST00000640957 RBMXL3Q8N7X1 1067 aaKnown RBP11.13□□□□□ -0.63
SCARB2-227ENST00000640957 OR10AG1Q8NH19 301 aa11.13□□□□□ -0.63
SCARB2-227ENST00000640957 C18orf15Q96N68 181 aa11.13□□□□□ -0.63
SCARB2-227ENST00000640957 C1RLQ9NZP8 487 aa11.13□□□□□ -0.63
SCARB2-227ENST00000640957 IGKV1D-17A0A075B6S4 117 aa11.12□□□□□ -0.63
SCARB2-227ENST00000640957 TIMM23BQ5SRD1 257 aa11.12□□□□□ -0.63
SCARB2-227ENST00000640957 TMEM178AQ8NBL3 297 aa11.12□□□□□ -0.63
SCARB2-227ENST00000640957 A0A0G2JLM5 398 aa11.12□□□□□ -0.63
SCARB2-227ENST00000640957 hADV38S2A0JD32 116 aa11.12□□□□□ -0.63
SCARB2-227ENST00000640957 IGHV1-2P23083 117 aa11.12□□□□□ -0.63
SCARB2-227ENST00000640957 MAP1AP78559 2803 aaPredicted RBP11.12□□□□□ -0.63
SCARB2-227ENST00000640957 HIST1H1AQ02539 215 aaPredicted RBP11.12□□□□□ -0.63
SCARB2-227ENST00000640957 C10orf113Q5VZT2 155 aa11.12□□□□□ -0.63
SCARB2-227ENST00000640957 LINC00305Q7Z4B0 112 aa11.12□□□□□ -0.63
SCARB2-227ENST00000640957 PRSS3P2Q8NHM4 247 aa11.12□□□□□ -0.63
SCARB2-227ENST00000640957 SPCS1Q9Y6A9 102 aa11.12□□□□□ -0.63
SCARB2-227ENST00000640957 ADAMTS20P59510 1910 aa11.12□□□□□ -0.63
SCARB2-227ENST00000640957 ASH1LQ9NR48 2969 aaKnown RBP11.12□□□□□ -0.63
SCARB2-227ENST00000640957 PATE2Q6UY27 113 aa11.11□□□□□ -0.63
SCARB2-227ENST00000640957 PRNTQ86SH4 94 aa11.11□□□□□ -0.63
SCARB2-227ENST00000640957 FDCSPQ8NFU4 85 aa11.11□□□□□ -0.63
SCARB2-227ENST00000640957 OR2K2Q8NGT1 345 aa11.11□□□□□ -0.63
SCARB2-227ENST00000640957 LINC00470Q9BZP3 86 aa11.11□□□□□ -0.63
SCARB2-227ENST00000640957 CHD8Q9HCK8 2581 aa11.11□□□□□ -0.63
SCARB2-227ENST00000640957 IGKV3D-15A0A087WSY6 115 aa11.11□□□□□ -0.63
SCARB2-227ENST00000640957 TEX48A0A1B0GUV7 120 aa11.11□□□□□ -0.63
SCARB2-227ENST00000640957 CD59P13987 128 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms