RNA–Protein interactions for RNA: ENST00000640657.1

HNRNPU-230, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-230ENST00000640657 PSG8Q9UQ74 426 aa4.12□□□□□ -1.75
HNRNPU-230ENST00000640657 IGHV3OR15-7A0A075B7D8 119 aa4.12□□□□□ -1.75
HNRNPU-230ENST00000640657 H3BVH4 76 aa4.12□□□□□ -1.75
HNRNPU-230ENST00000640657 PSPNO60542 156 aa4.12□□□□□ -1.75
HNRNPU-230ENST00000640657 MOSP00540 346 aa4.12□□□□□ -1.75
HNRNPU-230ENST00000640657 RFPL3SP0C7P2 107 aa4.12□□□□□ -1.75
HNRNPU-230ENST00000640657 SAA2P0DJI9 122 aaPredicted RBP4.12□□□□□ -1.75
HNRNPU-230ENST00000640657 CCL4P13236 92 aa4.12□□□□□ -1.75
HNRNPU-230ENST00000640657 MFAP4P55083 255 aa4.12□□□□□ -1.75
HNRNPU-230ENST00000640657 CFHR1Q03591 330 aa4.12□□□□□ -1.75
HNRNPU-230ENST00000640657 UBALD2Q8IYN6 164 aa4.12□□□□□ -1.75
HNRNPU-230ENST00000640657 SMRP1Q8NCR6 262 aa4.12□□□□□ -1.75
HNRNPU-230ENST00000640657 TMEM167AQ8TBQ9 72 aa4.12□□□□□ -1.75
HNRNPU-230ENST00000640657 ZNF502Q8TBZ5 544 aa4.12□□□□□ -1.75
HNRNPU-230ENST00000640657 FOXC2Q99958 501 aa4.12□□□□□ -1.75
HNRNPU-230ENST00000640657 FZR1Q9UM11 496 aa4.12□□□□□ -1.75
HNRNPU-230ENST00000640657 LINC00312Q9Y6C7 94 aa4.12□□□□□ -1.75
HNRNPU-230ENST00000640657 TCF20Q9UGU0 1960 aaKnown RBP4.11□□□□□ -1.75
HNRNPU-230ENST00000640657 A8MWV9 139 aa4.11□□□□□ -1.75
HNRNPU-230ENST00000640657 PRR33A8MZF0 331 aa4.11□□□□□ -1.75
HNRNPU-230ENST00000640657 AHRRA9YTQ3 701 aa4.11□□□□□ -1.75
HNRNPU-230ENST00000640657 GOSR1O95249 250 aa4.11□□□□□ -1.75
HNRNPU-230ENST00000640657 PLAUP00749 431 aa4.11□□□□□ -1.75
HNRNPU-230ENST00000640657 SAA1P0DJI8 122 aaPredicted RBP4.11□□□□□ -1.75
HNRNPU-230ENST00000640657 PYYP10082 97 aa4.11□□□□□ -1.75
HNRNPU-230ENST00000640657 PLNP26678 52 aa4.11□□□□□ -1.75
HNRNPU-230ENST00000640657 SRSF6Q13247 344 aaKnown RBP4.11□□□□□ -1.75
HNRNPU-230ENST00000640657 RNFT1Q5M7Z0 435 aa4.11□□□□□ -1.75
HNRNPU-230ENST00000640657 TMEM108Q6UXF1 575 aa4.11□□□□□ -1.75
HNRNPU-230ENST00000640657 SPATA12Q7Z6I5 190 aa4.11□□□□□ -1.75
HNRNPU-230ENST00000640657 SAP25Q8TEE9 199 aa4.11□□□□□ -1.75
HNRNPU-230ENST00000640657 DLX4Q92988 240 aaPredicted RBP4.11□□□□□ -1.75
HNRNPU-230ENST00000640657 TIMD4Q96H15 378 aa4.11□□□□□ -1.75
HNRNPU-230ENST00000640657 COQ2Q96H96 371 aa4.11□□□□□ -1.75
HNRNPU-230ENST00000640657 TMEM160Q9NX00 188 aa4.11□□□□□ -1.75
HNRNPU-230ENST00000640657 SRRM5B3KS81 715 aa4.11□□□□□ -1.75
HNRNPU-230ENST00000640657 GGTLC3B5MD39 225 aa4.11□□□□□ -1.75
HNRNPU-230ENST00000640657 C9orf172C9J069 976 aa4.11□□□□□ -1.75
HNRNPU-230ENST00000640657 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.11□□□□□ -1.75
HNRNPU-230ENST00000640657 RNASE2P10153 161 aaKnown RBP4.11□□□□□ -1.75
HNRNPU-230ENST00000640657 SPINK2P20155 84 aa4.11□□□□□ -1.75
HNRNPU-230ENST00000640657 GATA2P23769 480 aaPredicted RBP4.11□□□□□ -1.75
HNRNPU-230ENST00000640657 LEPP41159 167 aa4.11□□□□□ -1.75
HNRNPU-230ENST00000640657 GNG5P63218 68 aa4.11□□□□□ -1.75
HNRNPU-230ENST00000640657 SRSF1Q07955 248 aaKnown RBP eCLIP4.11□□□□□ -1.752e-8■□□□□ 9.3
HNRNPU-230ENST00000640657 HES1Q14469 280 aa4.11□□□□□ -1.75
HNRNPU-230ENST00000640657 SPANXN1Q5VSR9 72 aa4.11□□□□□ -1.75
HNRNPU-230ENST00000640657 MBNL2Q5VZF2 373 aaKnown RBP4.11□□□□□ -1.75
HNRNPU-230ENST00000640657 HEATR5AQ86XA9 2040 aa4.11□□□□□ -1.75
HNRNPU-230ENST00000640657 TMSB15BA0A087X1C1 80 aa4.11□□□□□ -1.75
HNRNPU-230ENST00000640657 C22orf46C9J442 243 aa4.11□□□□□ -1.75
HNRNPU-230ENST00000640657 SS18L1O75177 396 aaPredicted RBP4.11□□□□□ -1.75
HNRNPU-230ENST00000640657 P0C879 139 aa4.11□□□□□ -1.75
HNRNPU-230ENST00000640657 AZU1P20160 251 aa4.11□□□□□ -1.75
HNRNPU-230ENST00000640657 GLRXP35754 106 aa4.11□□□□□ -1.75
HNRNPU-230ENST00000640657 Q5PR19 223 aa4.11□□□□□ -1.75
HNRNPU-230ENST00000640657 CRIP3Q6Q6R5 217 aa4.11□□□□□ -1.75
HNRNPU-230ENST00000640657 ITLN1Q8WWA0 313 aa4.11□□□□□ -1.75
HNRNPU-230ENST00000640657 ASCL2Q99929 193 aa4.11□□□□□ -1.75
HNRNPU-230ENST00000640657 VGLL1Q99990 258 aa4.11□□□□□ -1.75
HNRNPU-230ENST00000640657 CHAC1Q9BUX1 264 aa4.11□□□□□ -1.75
HNRNPU-230ENST00000640657 HIGD1BQ9P298 99 aa4.11□□□□□ -1.75
HNRNPU-230ENST00000640657 ZNF256Q9Y2P7 627 aaPredicted RBP4.11□□□□□ -1.75
HNRNPU-230ENST00000640657 UFC1Q9Y3C8 167 aa4.11□□□□□ -1.75
HNRNPU-230ENST00000640657 SCN5AQ14524 2016 aa4.11□□□□□ -1.75
HNRNPU-230ENST00000640657 AGFG2O95081 481 aa4.1□□□□□ -1.75
HNRNPU-230ENST00000640657 ALKBH6Q3KRA9 238 aa4.1□□□□□ -1.75
HNRNPU-230ENST00000640657 ORMDL2Q53FV1 153 aa4.1□□□□□ -1.75
HNRNPU-230ENST00000640657 ZNF788Q6ZQV5 615 aa4.1□□□□□ -1.75
HNRNPU-230ENST00000640657 ZCCHC24Q8N2G6 241 aaKnown RBP4.1□□□□□ -1.75
HNRNPU-230ENST00000640657 IGF2BP2-AS1Q96M15 143 aa4.1□□□□□ -1.75
HNRNPU-230ENST00000640657 HS3ST6Q96QI5 342 aa4.1□□□□□ -1.75
HNRNPU-230ENST00000640657 CCL13Q99616 98 aa4.1□□□□□ -1.75
HNRNPU-230ENST00000640657 ZNF747Q9BV97 191 aa4.1□□□□□ -1.75
HNRNPU-230ENST00000640657 NPFFR1Q9GZQ6 430 aa4.1□□□□□ -1.75
HNRNPU-230ENST00000640657 ZNF576Q9H609 170 aa4.1□□□□□ -1.75
HNRNPU-230ENST00000640657 SIGLEC8Q9NYZ4 499 aa4.1□□□□□ -1.75
HNRNPU-230ENST00000640657 R4GN57 208 aa4.1□□□□□ -1.75
HNRNPU-230ENST00000640657 TRAV5A0A0B4J249 113 aa4.1□□□□□ -1.75
HNRNPU-230ENST00000640657 TRAV8-6A0A0B4J262 113 aa4.1□□□□□ -1.75
HNRNPU-230ENST00000640657 ZNF562Q6V9R5 426 aa4.1□□□□□ -1.75
HNRNPU-230ENST00000640657 FAM169BQ8N8A8 192 aa4.1□□□□□ -1.75
HNRNPU-230ENST00000640657 TMEM75Q8N9X5 138 aa4.1□□□□□ -1.75
HNRNPU-230ENST00000640657 COPS9Q8WXC6 57 aa4.1□□□□□ -1.75
HNRNPU-230ENST00000640657 SRSF8Q9BRL6 282 aaKnown RBP4.1□□□□□ -1.75
HNRNPU-230ENST00000640657 GEMIN7Q9H840 131 aaKnown RBP4.1□□□□□ -1.75
HNRNPU-230ENST00000640657 SPANXCQ9NY87 97 aa4.1□□□□□ -1.75
HNRNPU-230ENST00000640657 TMEM14CQ9P0S9 112 aa4.1□□□□□ -1.75
HNRNPU-230ENST00000640657 RPUSD1Q9UJJ7 312 aaKnown RBP4.1□□□□□ -1.75
HNRNPU-230ENST00000640657 RAXQ9Y2V3 346 aa4.1□□□□□ -1.75
HNRNPU-230ENST00000640657 TSSC4Q9Y5U2 329 aaPredicted RBP4.1□□□□□ -1.75
HNRNPU-230ENST00000640657 F5P12259 2224 aa4.1□□□□□ -1.75
HNRNPU-230ENST00000640657 TRBV20OR9-2A0A075B6H5 130 aa4.1□□□□□ -1.75
HNRNPU-230ENST00000640657 TRBV20-1A0A075B6N2 111 aa4.1□□□□□ -1.75
HNRNPU-230ENST00000640657 FABP5P3A8MUU1 101 aa4.1□□□□□ -1.75
HNRNPU-230ENST00000640657 CRXO43186 299 aaPredicted RBP4.1□□□□□ -1.75
HNRNPU-230ENST00000640657 GAGE2BQ13066 116 aa4.1□□□□□ -1.75
HNRNPU-230ENST00000640657 GAGE2EQ4V326 116 aa4.1□□□□□ -1.75
HNRNPU-230ENST00000640657 TMEM78Q5T7P6 136 aa4.1□□□□□ -1.75
HNRNPU-230ENST00000640657 Q86TA4 180 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms