RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 TRAV14DV4A0A0A6YYC5 116 aa16.27■□□□□ 0.2
CACNA1A-257ENST00000638009 H3BQ85 93 aa16.27■□□□□ 0.2
CACNA1A-257ENST00000638009 SIGLEC15Q6ZMC9 328 aa16.27■□□□□ 0.2
CACNA1A-257ENST00000638009 PPDPFLQ8WWR9 84 aa16.27■□□□□ 0.2
CACNA1A-257ENST00000638009 IGFBP2P18065 325 aa16.27■□□□□ 0.2
CACNA1A-257ENST00000638009 UCP1P25874 307 aa16.27■□□□□ 0.2
CACNA1A-257ENST00000638009 NRN1LQ496H8 165 aa16.27■□□□□ 0.2
CACNA1A-257ENST00000638009 RNF125Q96EQ8 232 aa16.27■□□□□ 0.2
CACNA1A-257ENST00000638009 KIR3DS1Q14943 382 aa16.27■□□□□ 0.19
CACNA1A-257ENST00000638009 C16orf47Q6ZP98 133 aaPredicted RBP16.27■□□□□ 0.19
CACNA1A-257ENST00000638009 FAM168AQ92567 244 aa16.27■□□□□ 0.19
CACNA1A-257ENST00000638009 FOXL1Q12952 345 aa16.27■□□□□ 0.19
CACNA1A-257ENST00000638009 RPL23P62829 140 aaKnown RBP16.26■□□□□ 0.19
CACNA1A-257ENST00000638009 LINC00312Q9Y6C7 94 aa16.26■□□□□ 0.19
CACNA1A-257ENST00000638009 HIST1H2BLQ99880 126 aa16.26■□□□□ 0.19
CACNA1A-257ENST00000638009 DLEU1O43261 78 aa16.26■□□□□ 0.19
CACNA1A-257ENST00000638009 SPATA25Q9BR10 227 aa16.26■□□□□ 0.19
CACNA1A-257ENST00000638009 ZNF831Q5JPB2 1677 aa16.26■□□□□ 0.19
CACNA1A-257ENST00000638009 FNDC1Q4ZHG4 1894 aaPredicted RBP16.26■□□□□ 0.19
CACNA1A-257ENST00000638009 hADV29S1A0JD25 119 aa16.26■□□□□ 0.19
CACNA1A-257ENST00000638009 TCRAP04437 139 aa16.26■□□□□ 0.19
CACNA1A-257ENST00000638009 FHL5Q5TD97 284 aa16.26■□□□□ 0.19
CACNA1A-257ENST00000638009 SLC25A47Q6Q0C1 308 aa16.26■□□□□ 0.19
CACNA1A-257ENST00000638009 C9JAW5 83 aa16.25■□□□□ 0.19
CACNA1A-257ENST00000638009 NBR2O15453 112 aa16.25■□□□□ 0.19
CACNA1A-257ENST00000638009 KCNK17Q96T54 332 aa16.25■□□□□ 0.19
CACNA1A-257ENST00000638009 TRBV5-7A0A0A0MS05 114 aa16.25■□□□□ 0.19
CACNA1A-257ENST00000638009 H3BTX0 84 aa16.25■□□□□ 0.19
CACNA1A-257ENST00000638009 EREGO14944 169 aa16.25■□□□□ 0.19
CACNA1A-257ENST00000638009 C1QAP02745 245 aa16.25■□□□□ 0.19
CACNA1A-257ENST00000638009 ACP7Q6ZNF0 438 aa16.25■□□□□ 0.19
CACNA1A-257ENST00000638009 EVI2AP22794 236 aa16.25■□□□□ 0.19
CACNA1A-257ENST00000638009 CXCL10P02778 98 aa16.25■□□□□ 0.19
CACNA1A-257ENST00000638009 C1orf194Q5T5A4 169 aa16.25■□□□□ 0.19
CACNA1A-257ENST00000638009 KLHDC2Q9Y2U9 406 aa16.25■□□□□ 0.19
CACNA1A-257ENST00000638009 NKAPP1Q8N9T2 125 aa16.25■□□□□ 0.19
CACNA1A-257ENST00000638009 GUSBP1Q15486 140 aa16.25■□□□□ 0.19
CACNA1A-257ENST00000638009 CD300EQ496F6 205 aaPredicted RBP16.25■□□□□ 0.19
CACNA1A-257ENST00000638009 CLEC19AQ6UXS0 136 aa16.25■□□□□ 0.19
CACNA1A-257ENST00000638009 Q6ZT83 130 aa16.25■□□□□ 0.19
CACNA1A-257ENST00000638009 ALPK3Q96L96 1907 aa16.24■□□□□ 0.19
CACNA1A-257ENST00000638009 IGHG4P01861 327 aa16.24■□□□□ 0.19
CACNA1A-257ENST00000638009 LIMS1P48059 325 aa16.24■□□□□ 0.19
CACNA1A-257ENST00000638009 GAGE12JA6NER3 117 aa16.24■□□□□ 0.19
CACNA1A-257ENST00000638009 GAGE1Q13065 139 aa16.24■□□□□ 0.19
CACNA1A-257ENST00000638009 GAGE4Q13068 117 aa16.24■□□□□ 0.19
CACNA1A-257ENST00000638009 GAGE5Q13069 117 aa16.24■□□□□ 0.19
CACNA1A-257ENST00000638009 GAGE6Q13070 117 aa16.24■□□□□ 0.19
CACNA1A-257ENST00000638009 TM2D1Q9BX74 207 aa16.24■□□□□ 0.19
CACNA1A-257ENST00000638009 TNRC6BQ9UPQ9 1833 aaKnown RBP16.24■□□□□ 0.19
CACNA1A-257ENST00000638009 IFITM3Q01628 133 aa16.24■□□□□ 0.19
CACNA1A-257ENST00000638009 TTC28Q96AY4 2481 aa16.24■□□□□ 0.19
CACNA1A-257ENST00000638009 PGFP49763 221 aa16.24■□□□□ 0.19
CACNA1A-257ENST00000638009 ADAMTSL5Q6ZMM2 481 aa16.24■□□□□ 0.19
CACNA1A-257ENST00000638009 CD200R1LQ6Q8B3 271 aa16.24■□□□□ 0.19
CACNA1A-257ENST00000638009 HEPN1Q6WQI6 88 aa16.24■□□□□ 0.19
CACNA1A-257ENST00000638009 C8orf46Q8TAG6 207 aa16.24■□□□□ 0.19
CACNA1A-257ENST00000638009 CHKB-CPT1BH3BT56 60 aa16.23■□□□□ 0.19
CACNA1A-257ENST00000638009 ZIC3O60481 467 aa16.23■□□□□ 0.19
CACNA1A-257ENST00000638009 IGHV3-48P01763 117 aa16.23■□□□□ 0.19
CACNA1A-257ENST00000638009 PROB1E7EW31 1015 aa16.23■□□□□ 0.19
CACNA1A-257ENST00000638009 PRIMA1Q86XR5 153 aa16.23■□□□□ 0.19
CACNA1A-257ENST00000638009 EFEMP2O95967 443 aa16.23■□□□□ 0.19
CACNA1A-257ENST00000638009 PRSS22Q9GZN4 317 aa16.23■□□□□ 0.19
CACNA1A-257ENST00000638009 LHFPL6Q9Y693 200 aa16.23■□□□□ 0.19
CACNA1A-257ENST00000638009 IGHV3-64A0A075B6Q5 118 aa16.23■□□□□ 0.19
CACNA1A-257ENST00000638009 TIMP3P35625 211 aa16.23■□□□□ 0.19
CACNA1A-257ENST00000638009 MRPL27Q9P0M9 148 aaKnown RBP16.23■□□□□ 0.19
CACNA1A-257ENST00000638009 ZXDCQ2QGD7 858 aaPredicted RBP16.22■□□□□ 0.19
CACNA1A-257ENST00000638009 ZNF114Q8NC26 417 aa16.22■□□□□ 0.19
CACNA1A-257ENST00000638009 MSGN1A6NI15 193 aa16.22■□□□□ 0.19
CACNA1A-257ENST00000638009 FAM60AQ9NP50 221 aa16.22■□□□□ 0.19
CACNA1A-257ENST00000638009 ZSWIM8A7E2V4 1837 aa16.22■□□□□ 0.19
CACNA1A-257ENST00000638009 MYF5P13349 255 aa16.21■□□□□ 0.19
CACNA1A-257ENST00000638009 A0A0G2JMZ2 1700 aa16.21■□□□□ 0.19
CACNA1A-257ENST00000638009 LRRC37A2A6NM11 1700 aa16.21■□□□□ 0.19
CACNA1A-257ENST00000638009 LRRC37AA6NMS7 1700 aa16.21■□□□□ 0.19
CACNA1A-257ENST00000638009 ATP6V0BQ99437 205 aa16.21■□□□□ 0.19
CACNA1A-257ENST00000638009 LY6G5BQ8NDX9 201 aa16.21■□□□□ 0.18
CACNA1A-257ENST00000638009 ADAMTSL1Q8N6G6 1762 aa16.21■□□□□ 0.18
CACNA1A-257ENST00000638009 TFF3Q07654 80 aa16.2■□□□□ 0.18
CACNA1A-257ENST00000638009 MYEOVQ96EZ4 313 aa16.2■□□□□ 0.18
CACNA1A-257ENST00000638009 IGHV3-66A0A0C4DH42 116 aa16.2■□□□□ 0.18
CACNA1A-257ENST00000638009 ACTL10Q5JWF8 245 aa16.2■□□□□ 0.18
CACNA1A-257ENST00000638009 ZNF826PQ6ZT77 177 aa16.2■□□□□ 0.18
CACNA1A-257ENST00000638009 LINC01465Q8N7H1 131 aa16.2■□□□□ 0.18
CACNA1A-257ENST00000638009 CACNA1AO00555 2505 aa16.2■□□□□ 0.18
CACNA1A-257ENST00000638009 TRBV24-1A0A075B6N3 115 aa16.2■□□□□ 0.18
CACNA1A-257ENST00000638009 PILRAQ9UKJ1 303 aa16.2■□□□□ 0.18
CACNA1A-257ENST00000638009 IGHV1-45A0A0A0MS14 117 aa16.2■□□□□ 0.18
CACNA1A-257ENST00000638009 LINC00477Q96M19 166 aa16.2■□□□□ 0.18
CACNA1A-257ENST00000638009 IGHV3-49A0A0A0MS15 119 aa16.19■□□□□ 0.18
CACNA1A-257ENST00000638009 TRAV13-2A0A0B4J235 113 aa16.19■□□□□ 0.18
CACNA1A-257ENST00000638009 SEC61GP60059 68 aa16.19■□□□□ 0.18
CACNA1A-257ENST00000638009 SPSB3Q6PJ21 355 aa16.19■□□□□ 0.18
CACNA1A-257ENST00000638009 FBLIM1Q8WUP2 373 aa16.19■□□□□ 0.18
CACNA1A-257ENST00000638009 IL17RELQ6ZVW7 336 aa16.19■□□□□ 0.18
CACNA1A-257ENST00000638009 A0A1W2PQF6 199 aa16.19■□□□□ 0.18
CACNA1A-257ENST00000638009 NPC2P61916 151 aa16.19■□□□□ 0.18
CACNA1A-257ENST00000638009 PAX8Q06710 450 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms