RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 MFFQ9GZY8 342 aa13.91□□□□□ -0.18
CLN6-221ENST00000637494 CSMD3Q7Z407 3707 aa13.9□□□□□ -0.18
CLN6-221ENST00000637494 EWSR1Q01844 656 aaKnown RBP eCLIP13.9□□□□□ -0.187e-6■■□□□ 12.2
CLN6-221ENST00000637494 SIGLEC15Q6ZMC9 328 aa13.9□□□□□ -0.18
CLN6-221ENST00000637494 GLMPQ8WWB7 406 aa13.9□□□□□ -0.18
CLN6-221ENST00000637494 PBDC1Q9BVG4 233 aa13.9□□□□□ -0.18
CLN6-221ENST00000637494 STARD9Q9P2P6 4700 aa13.9□□□□□ -0.18
CLN6-221ENST00000637494 NAP1L6A6NFF2 107 aa13.89□□□□□ -0.19
CLN6-221ENST00000637494 IAPPP10997 89 aa13.89□□□□□ -0.19
CLN6-221ENST00000637494 UBE2MP61081 183 aaKnown RBP13.89□□□□□ -0.19
CLN6-221ENST00000637494 PPP1R1AQ13522 171 aa13.89□□□□□ -0.19
CLN6-221ENST00000637494 RNF125Q96EQ8 232 aa13.89□□□□□ -0.19
CLN6-221ENST00000637494 C11orf68Q9H3H3 251 aaKnown RBP13.89□□□□□ -0.19
CLN6-221ENST00000637494 NRN1Q9NPD7 142 aa13.89□□□□□ -0.19
CLN6-221ENST00000637494 BUB3O43684 328 aa13.88□□□□□ -0.19
CLN6-221ENST00000637494 PITX3O75364 302 aa13.88□□□□□ -0.19
CLN6-221ENST00000637494 GAMTQ14353 236 aa13.88□□□□□ -0.19
CLN6-221ENST00000637494 PSMG4Q5JS54 123 aa13.88□□□□□ -0.19
CLN6-221ENST00000637494 ACTL10Q5JWF8 245 aa13.88□□□□□ -0.19
CLN6-221ENST00000637494 OR8G2PQ6IF36 304 aa13.88□□□□□ -0.19
CLN6-221ENST00000637494 TRPT1Q86TN4 253 aaKnown RBP13.88□□□□□ -0.19
CLN6-221ENST00000637494 C11orf45Q8TAV5 145 aa13.88□□□□□ -0.19
CLN6-221ENST00000637494 RBM38Q9H0Z9 239 aaKnown RBP13.88□□□□□ -0.19
CLN6-221ENST00000637494 SEPSECSQ9HD40 501 aaKnown RBP13.88□□□□□ -0.19
CLN6-221ENST00000637494 DYNC2H1Q8NCM8 4307 aaKnown RBP13.87□□□□□ -0.19
CLN6-221ENST00000637494 KNCNA6PVL3 124 aa13.87□□□□□ -0.19
CLN6-221ENST00000637494 CENPXA8MT69 81 aa13.87□□□□□ -0.19
CLN6-221ENST00000637494 LY6G6CO95867 125 aa13.87□□□□□ -0.19
CLN6-221ENST00000637494 HOXB5P09067 269 aa13.87□□□□□ -0.19
CLN6-221ENST00000637494 NUTF2P61970 127 aaKnown RBP13.87□□□□□ -0.19
CLN6-221ENST00000637494 PHLDA1Q8WV24 401 aaPredicted RBP13.87□□□□□ -0.19
CLN6-221ENST00000637494 PPP1R14BQ96C90 147 aa13.87□□□□□ -0.19
CLN6-221ENST00000637494 SRRQ9GZT4 340 aa13.87□□□□□ -0.19
CLN6-221ENST00000637494 FBXL17Q9UF56 701 aa13.87□□□□□ -0.19
CLN6-221ENST00000637494 SNRPGP15A8MWD9 76 aa13.86□□□□□ -0.19
CLN6-221ENST00000637494 SYNGR2O43760 224 aa13.86□□□□□ -0.19
CLN6-221ENST00000637494 LYZP61626 148 aa13.86□□□□□ -0.19
CLN6-221ENST00000637494 LINC00476Q8WZB0 136 aa13.86□□□□□ -0.19
CLN6-221ENST00000637494 RAB40CQ96S21 281 aa13.86□□□□□ -0.19
CLN6-221ENST00000637494 WRBO00258 174 aa13.85□□□□□ -0.19
CLN6-221ENST00000637494 CFDP00746 253 aaPredicted RBP13.85□□□□□ -0.19
CLN6-221ENST00000637494 ZNF90Q03938 601 aa13.85□□□□□ -0.19
CLN6-221ENST00000637494 GGNBP1Q5YKI7 109 aa13.85□□□□□ -0.19
CLN6-221ENST00000637494 COQ8AQ8NI60 647 aa13.85□□□□□ -0.19
CLN6-221ENST00000637494 C1QTNF4Q9BXJ3 329 aa13.85□□□□□ -0.19
CLN6-221ENST00000637494 MAGT1Q9H0U3 335 aa13.85□□□□□ -0.19
CLN6-221ENST00000637494 IFNA21P01568 189 aa13.84□□□□□ -0.19
CLN6-221ENST00000637494 S100A7P31151 101 aa13.84□□□□□ -0.19
CLN6-221ENST00000637494 ID1P41134 155 aa13.84□□□□□ -0.19
CLN6-221ENST00000637494 TRGV9Q99603 122 aa13.84□□□□□ -0.19
CLN6-221ENST00000637494 RYR2Q92736 4967 aa13.83□□□□□ -0.19
CLN6-221ENST00000637494 C9orf170A2RU37 121 aa13.83□□□□□ -0.2
CLN6-221ENST00000637494 NDUFB6O95139 128 aa13.83□□□□□ -0.2
CLN6-221ENST00000637494 MIFP14174 115 aa13.83□□□□□ -0.2
CLN6-221ENST00000637494 OR2F1Q13607 317 aa13.83□□□□□ -0.2
CLN6-221ENST00000637494 SPANXN5Q5MJ07 72 aa13.83□□□□□ -0.2
CLN6-221ENST00000637494 C1orf194Q5T5A4 169 aa13.83□□□□□ -0.2
CLN6-221ENST00000637494 STRAPQ9Y3F4 350 aaKnown RBP13.83□□□□□ -0.2
CLN6-221ENST00000637494 IGKV1D-37A0A075B6S9 117 aa13.82□□□□□ -0.2
CLN6-221ENST00000637494 DEFB4AO15263 64 aa13.82□□□□□ -0.2
CLN6-221ENST00000637494 NANOS2P60321 138 aaKnown RBP13.82□□□□□ -0.2
CLN6-221ENST00000637494 BAK1Q16611 211 aa13.82□□□□□ -0.2
CLN6-221ENST00000637494 C7orf50Q9BRJ6 194 aaKnown RBP13.82□□□□□ -0.2
CLN6-221ENST00000637494 LINC00854A0A1B0GVQ3 168 aa13.81□□□□□ -0.2
CLN6-221ENST00000637494 C4BPBP20851 252 aa13.81□□□□□ -0.2
CLN6-221ENST00000637494 NKX2-1P43699 371 aaPredicted RBP13.81□□□□□ -0.2
CLN6-221ENST00000637494 AKR1C1Q04828 323 aa13.81□□□□□ -0.2
CLN6-221ENST00000637494 CNPY1Q3B7I2 92 aa13.81□□□□□ -0.2
CLN6-221ENST00000637494 C4orf46Q504U0 113 aa13.81□□□□□ -0.2
CLN6-221ENST00000637494 OR8I2Q8N0Y5 310 aa13.81□□□□□ -0.2
CLN6-221ENST00000637494 THAP8Q8NA92 274 aa13.81□□□□□ -0.2
CLN6-221ENST00000637494 TBC1D24Q9ULP9 559 aa13.81□□□□□ -0.2
CLN6-221ENST00000637494 LYSTQ99698 3801 aa13.8□□□□□ -0.2
CLN6-221ENST00000637494 SACSQ9NZJ4 4579 aa13.8□□□□□ -0.2
CLN6-221ENST00000637494 OR4E1P0C645 316 aa13.8□□□□□ -0.2
CLN6-221ENST00000637494 SAMD13Q5VXD3 122 aa13.8□□□□□ -0.2
CLN6-221ENST00000637494 BPIFCQ8NFQ6 507 aa13.8□□□□□ -0.2
CLN6-221ENST00000637494 LINC00052Q96N35 136 aa13.8□□□□□ -0.2
CLN6-221ENST00000637494 NDUFA13Q9P0J0 144 aa13.8□□□□□ -0.2
CLN6-221ENST00000637494 IGHV4-28A0A0C4DH34 117 aa13.79□□□□□ -0.2
CLN6-221ENST00000637494 H3BP45 60 aa13.79□□□□□ -0.2
CLN6-221ENST00000637494 ADAP1O75689 374 aa13.79□□□□□ -0.2
CLN6-221ENST00000637494 GIG44P09565 113 aaPredicted RBP13.79□□□□□ -0.2
CLN6-221ENST00000637494 PSMB3P49720 205 aa13.79□□□□□ -0.2
CLN6-221ENST00000637494 Q8NAQ8 132 aa13.79□□□□□ -0.2
CLN6-221ENST00000637494 C2CD4CQ8TF44 421 aa13.79□□□□□ -0.2
CLN6-221ENST00000637494 CLEC5AQ9NY25 188 aa13.79□□□□□ -0.2
CLN6-221ENST00000637494 PSENENQ9NZ42 101 aa13.79□□□□□ -0.2
CLN6-221ENST00000637494 SLC45A2Q9UMX9 530 aa13.79□□□□□ -0.2
CLN6-221ENST00000637494 FLVCR2Q9UPI3 526 aa13.79□□□□□ -0.2
CLN6-221ENST00000637494 SMCO3A2RU48 225 aa13.78□□□□□ -0.2
CLN6-221ENST00000637494 ZNF705EA8MWA4 302 aaPredicted RBP13.78□□□□□ -0.2
CLN6-221ENST00000637494 C11orf94C9JXX5 98 aa13.78□□□□□ -0.2
CLN6-221ENST00000637494 H3BMM0 161 aa13.78□□□□□ -0.2
CLN6-221ENST00000637494 HLA-DRB4P13762 266 aa13.78□□□□□ -0.2
CLN6-221ENST00000637494 GALR1P47211 349 aa13.78□□□□□ -0.2
CLN6-221ENST00000637494 MEOX2P50222 304 aa13.78□□□□□ -0.2
CLN6-221ENST00000637494 HRH4Q9H3N8 390 aa13.78□□□□□ -0.2
CLN6-221ENST00000637494 HLA-DRB4X5D2U9 266 aa13.78□□□□□ -0.2
CLN6-221ENST00000637494 TCTAP57738 103 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms