RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 LCNL1Q6ZST4 164 aa9.74□□□□□ -0.85
SHPRH-211ENST00000629427 IGKV2-40A0A087WW87 121 aaPredicted RBP9.74□□□□□ -0.85
SHPRH-211ENST00000629427 A0A1B0GV90 55 aa9.74□□□□□ -0.85
SHPRH-211ENST00000629427 IGKV2D-40P01614 121 aaPredicted RBP9.74□□□□□ -0.85
SHPRH-211ENST00000629427 EFNA4P52798 201 aa9.74□□□□□ -0.85
SHPRH-211ENST00000629427 LINC00114Q6XXX2 140 aa9.74□□□□□ -0.85
SHPRH-211ENST00000629427 TIMP3P35625 211 aa9.73□□□□□ -0.85
SHPRH-211ENST00000629427 NPC2P61916 151 aa9.73□□□□□ -0.85
SHPRH-211ENST00000629427 OVOL1O14753 267 aa9.73□□□□□ -0.85
SHPRH-211ENST00000629427 DPM2O94777 84 aa9.73□□□□□ -0.85
SHPRH-211ENST00000629427 LINC00271P0C7V0 271 aa9.73□□□□□ -0.85
SHPRH-211ENST00000629427 UNQ6494/PRO21346Q6UXR6 183 aa9.73□□□□□ -0.85
SHPRH-211ENST00000629427 TMEM8BA6NDV4 472 aa9.73□□□□□ -0.85
SHPRH-211ENST00000629427 IGFBP3P17936 291 aaPredicted RBP9.73□□□□□ -0.85
SHPRH-211ENST00000629427 ACTL10Q5JWF8 245 aa9.73□□□□□ -0.85
SHPRH-211ENST00000629427 TRAV8-2A0A0B4J237 113 aa9.73□□□□□ -0.85
SHPRH-211ENST00000629427 A0A1B0GV72 72 aa9.73□□□□□ -0.85
SHPRH-211ENST00000629427 ADMP35318 185 aa9.73□□□□□ -0.85
SHPRH-211ENST00000629427 ZSWIM8A7E2V4 1837 aa9.73□□□□□ -0.85
SHPRH-211ENST00000629427 F2Z2F3 143 aa9.73□□□□□ -0.85
SHPRH-211ENST00000629427 ERVH48-1M5A8F1 160 aa9.73□□□□□ -0.85
SHPRH-211ENST00000629427 C20orf204Q6ZNR8 217 aa9.73□□□□□ -0.85
SHPRH-211ENST00000629427 FGFBP3Q8TAT2 258 aa9.73□□□□□ -0.85
SHPRH-211ENST00000629427 A0A0G2JNJ9 132 aa9.72□□□□□ -0.85
SHPRH-211ENST00000629427 PGPEP1LA6NFU8 196 aa9.72□□□□□ -0.85
SHPRH-211ENST00000629427 Q9UFV3 132 aa9.72□□□□□ -0.85
SHPRH-211ENST00000629427 H3BUX3 64 aa9.72□□□□□ -0.85
SHPRH-211ENST00000629427 IGHV3-53P01767 116 aa9.72□□□□□ -0.85
SHPRH-211ENST00000629427 PLNP26678 52 aa9.72□□□□□ -0.85
SHPRH-211ENST00000629427 DUTP33316 252 aaKnown RBP9.72□□□□□ -0.85
SHPRH-211ENST00000629427 CCL20P78556 96 aa9.72□□□□□ -0.85
SHPRH-211ENST00000629427 CFHR1Q03591 330 aa9.72□□□□□ -0.85
SHPRH-211ENST00000629427 TRGV1A0A0A0MS02 117 aa9.72□□□□□ -0.85
SHPRH-211ENST00000629427 B4DSR2 109 aa9.72□□□□□ -0.85
SHPRH-211ENST00000629427 SLC25A2Q9BXI2 301 aa9.72□□□□□ -0.85
SHPRH-211ENST00000629427 ROS1P08922 2347 aa9.72□□□□□ -0.85
SHPRH-211ENST00000629427 PRCDQ00LT1 54 aa9.72□□□□□ -0.85
SHPRH-211ENST00000629427 EFNB3Q15768 340 aa9.72□□□□□ -0.85
SHPRH-211ENST00000629427 MTURNQ8N3F0 131 aa9.72□□□□□ -0.85
SHPRH-211ENST00000629427 TNFRSF14Q92956 283 aa9.72□□□□□ -0.85
SHPRH-211ENST00000629427 PMS2P5A8MQ11 134 aa9.72□□□□□ -0.85
SHPRH-211ENST00000629427 RPL23P62829 140 aaKnown RBP9.72□□□□□ -0.85
SHPRH-211ENST00000629427 NDPQ00604 133 aa9.72□□□□□ -0.85
SHPRH-211ENST00000629427 TMEM178BH3BS89 294 aa9.71□□□□□ -0.85
SHPRH-211ENST00000629427 HBDP02042 147 aa9.71□□□□□ -0.85
SHPRH-211ENST00000629427 GZMBP10144 247 aa9.71□□□□□ -0.85
SHPRH-211ENST00000629427 SHISA3A0PJX4 238 aa9.71□□□□□ -0.85
SHPRH-211ENST00000629427 ORMDL2Q53FV1 153 aa9.71□□□□□ -0.85
SHPRH-211ENST00000629427 JPT2Q9H910 190 aa9.71□□□□□ -0.85
SHPRH-211ENST00000629427 CRIM1Q9NZV1 1036 aa9.71□□□□□ -0.85
SHPRH-211ENST00000629427 ANAPC1Q9H1A4 1944 aa9.71□□□□□ -0.85
SHPRH-211ENST00000629427 TRAV9-1A0A075B6T8 112 aa9.71□□□□□ -0.86
SHPRH-211ENST00000629427 TRBV7-1A0A0A6YYK4 115 aa9.71□□□□□ -0.86
SHPRH-211ENST00000629427 DTX1Q86Y01 620 aa9.71□□□□□ -0.86
SHPRH-211ENST00000629427 PIP4P2Q8N4L2 257 aa9.71□□□□□ -0.86
SHPRH-211ENST00000629427 KIF26AQ9ULI4 1882 aaPredicted RBP9.71□□□□□ -0.86
SHPRH-211ENST00000629427 NOTCH3Q9UM47 2321 aa9.71□□□□□ -0.86
SHPRH-211ENST00000629427 UBE2E2Q96LR5 201 aa9.71□□□□□ -0.86
SHPRH-211ENST00000629427 SPCS1Q9Y6A9 102 aa9.71□□□□□ -0.86
SHPRH-211ENST00000629427 IL18BPO95998 194 aa9.7□□□□□ -0.86
SHPRH-211ENST00000629427 GATD1Q8NB37 220 aa9.7□□□□□ -0.86
SHPRH-211ENST00000629427 NTN3O00634 580 aaPredicted RBP9.7□□□□□ -0.86
SHPRH-211ENST00000629427 TPTE2P1Q5T6R2 138 aa9.7□□□□□ -0.86
SHPRH-211ENST00000629427 IGHV1-3A0A0C4DH29 117 aa9.7□□□□□ -0.86
SHPRH-211ENST00000629427 GGTLC3B5MD39 225 aa9.7□□□□□ -0.86
SHPRH-211ENST00000629427 HOXA3O43365 443 aaPredicted RBP9.7□□□□□ -0.86
SHPRH-211ENST00000629427 IGHV1-8P0DP01 117 aa9.7□□□□□ -0.86
SHPRH-211ENST00000629427 PLSCR4Q9NRQ2 329 aa9.7□□□□□ -0.86
SHPRH-211ENST00000629427 DMRT1Q9Y5R6 373 aa9.7□□□□□ -0.86
SHPRH-211ENST00000629427 FCN3O75636 299 aa9.7□□□□□ -0.86
SHPRH-211ENST00000629427 NIT1Q86X76 327 aa9.7□□□□□ -0.86
SHPRH-211ENST00000629427 EXOC3-AS1Q8N2X6 119 aa9.7□□□□□ -0.86
SHPRH-211ENST00000629427 NHP2Q9NX24 153 aaKnown RBP9.7□□□□□ -0.86
SHPRH-211ENST00000629427 EML6Q6ZMW3 1958 aa9.7□□□□□ -0.86
SHPRH-211ENST00000629427 USF3Q68DE3 2245 aa9.7□□□□□ -0.86
SHPRH-211ENST00000629427 C1QTNF9P0C862 333 aa9.7□□□□□ -0.86
SHPRH-211ENST00000629427 MBD3L1Q8WWY6 194 aa9.7□□□□□ -0.86
SHPRH-211ENST00000629427 SELLP14151 372 aa9.69□□□□□ -0.86
SHPRH-211ENST00000629427 SRSF6Q13247 344 aaKnown RBP9.69□□□□□ -0.86
SHPRH-211ENST00000629427 TEX38Q6PEX7 206 aa9.69□□□□□ -0.86
SHPRH-211ENST00000629427 MESP1Q9BRJ9 268 aa9.69□□□□□ -0.86
SHPRH-211ENST00000629427 SLC25A39Q9BZJ4 359 aaPredicted RBP9.69□□□□□ -0.86
SHPRH-211ENST00000629427 IGKCP01834 107 aa9.69□□□□□ -0.86
SHPRH-211ENST00000629427 MINOS1Q5TGZ0 78 aa9.69□□□□□ -0.86
SHPRH-211ENST00000629427 DMRTA1Q5VZB9 504 aa9.69□□□□□ -0.86
SHPRH-211ENST00000629427 MINOS1-NBL1R4GNA1 71 aa9.69□□□□□ -0.86
SHPRH-211ENST00000629427 PKDREJQ9NTG1 2253 aa9.69□□□□□ -0.86
SHPRH-211ENST00000629427 TRAV5A0A0B4J249 113 aa9.69□□□□□ -0.86
SHPRH-211ENST00000629427 ZNF329Q86UD4 541 aa9.69□□□□□ -0.86
SHPRH-211ENST00000629427 RLFQ13129 1914 aa9.69□□□□□ -0.86
SHPRH-211ENST00000629427 SERF1AO75920 110 aa9.69□□□□□ -0.86
SHPRH-211ENST00000629427 SCRT1Q9BWW7 348 aa9.69□□□□□ -0.86
SHPRH-211ENST00000629427 IGKV1-9A0A0C4DH69 117 aa9.69□□□□□ -0.86
SHPRH-211ENST00000629427 SRRM4A7MD48 611 aaKnown RBP9.69□□□□□ -0.86
SHPRH-211ENST00000629427 LAGE3Q14657 143 aa9.69□□□□□ -0.86
SHPRH-211ENST00000629427 LINC01356Q8N9X3 169 aa9.69□□□□□ -0.86
SHPRH-211ENST00000629427 A0A087WWC5 75 aa9.68□□□□□ -0.86
SHPRH-211ENST00000629427 IGLV3-32A0A0A0MS00 114 aa9.68□□□□□ -0.86
SHPRH-211ENST00000629427 ZNF474Q6S9Z5 364 aaPredicted RBP9.68□□□□□ -0.86
SHPRH-211ENST00000629427 GGNQ86UU5 652 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms