RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 FUSP35637 526 aaKnown RBP eCLIP9.78□□□□□ -0.84
SNX1-214ENST00000625244 UBE2MP61081 183 aaKnown RBP9.78□□□□□ -0.84
SNX1-214ENST00000625244 Q56UQ5 140 aa9.78□□□□□ -0.84
SNX1-214ENST00000625244 ACTL10Q5JWF8 245 aa9.78□□□□□ -0.84
SNX1-214ENST00000625244 SLC25A24Q6NUK1 477 aa9.78□□□□□ -0.84
SNX1-214ENST00000625244 FAM219AQ8IW50 185 aa9.78□□□□□ -0.84
SNX1-214ENST00000625244 OR10W1Q8NGF6 305 aa9.78□□□□□ -0.84
SNX1-214ENST00000625244 ENKURQ8TC29 256 aa9.78□□□□□ -0.84
SNX1-214ENST00000625244 ST8SIA2Q92186 375 aa9.78□□□□□ -0.84
SNX1-214ENST00000625244 TRAV2A0A0B4J234 112 aa9.77□□□□□ -0.85
SNX1-214ENST00000625244 IGHV3-66A0A0C4DH42 116 aa9.77□□□□□ -0.85
SNX1-214ENST00000625244 PLA2G10O15496 165 aa9.77□□□□□ -0.85
SNX1-214ENST00000625244 CDS2O95674 445 aa9.77□□□□□ -0.85
SNX1-214ENST00000625244 RPL11P62913 178 aaKnown RBP9.77□□□□□ -0.85
SNX1-214ENST00000625244 ASAH1Q13510 395 aa9.77□□□□□ -0.85
SNX1-214ENST00000625244 C4orf46Q504U0 113 aa9.77□□□□□ -0.85
SNX1-214ENST00000625244 TMEM268Q5VZI3 342 aa9.77□□□□□ -0.85
SNX1-214ENST00000625244 THOC7Q6I9Y2 204 aaKnown RBP9.77□□□□□ -0.85
SNX1-214ENST00000625244 LGI3Q8N145 548 aa9.77□□□□□ -0.85
SNX1-214ENST00000625244 OR1L8Q8NGR8 309 aa9.77□□□□□ -0.85
SNX1-214ENST00000625244 GLYATL2Q8WU03 294 aa9.77□□□□□ -0.85
SNX1-214ENST00000625244 IL22RA2Q969J5 263 aa9.77□□□□□ -0.85
SNX1-214ENST00000625244 TMEM230Q96A57 120 aa9.77□□□□□ -0.85
SNX1-214ENST00000625244 ZNF503Q96F45 646 aa9.77□□□□□ -0.85
SNX1-214ENST00000625244 SEC22AQ96IW7 307 aa9.77□□□□□ -0.85
SNX1-214ENST00000625244 ATP6V0BQ99437 205 aa9.77□□□□□ -0.85
SNX1-214ENST00000625244 NIPSNAP3BQ9BS92 247 aa9.77□□□□□ -0.85
SNX1-214ENST00000625244 C20orf85Q9H1P6 137 aa9.77□□□□□ -0.85
SNX1-214ENST00000625244 DKK2Q9UBU2 259 aa9.77□□□□□ -0.85
SNX1-214ENST00000625244 RABAC1Q9UI14 185 aa9.77□□□□□ -0.85
SNX1-214ENST00000625244 DNAH8Q96JB1 4490 aa9.76□□□□□ -0.85
SNX1-214ENST00000625244 TRAV3A0A0B4J244 114 aa9.76□□□□□ -0.85
SNX1-214ENST00000625244 K7EIM0 57 aa9.76□□□□□ -0.85
SNX1-214ENST00000625244 CYB5BO43169 146 aa9.76□□□□□ -0.85
SNX1-214ENST00000625244 ST8SIA3O43173 380 aa9.76□□□□□ -0.85
SNX1-214ENST00000625244 TCRBP04435 133 aa9.76□□□□□ -0.85
SNX1-214ENST00000625244 CD5P06127 495 aa9.76□□□□□ -0.85
SNX1-214ENST00000625244 BTF3P20290 206 aaKnown RBP9.76□□□□□ -0.85
SNX1-214ENST00000625244 BTCP35070 178 aa9.76□□□□□ -0.85
SNX1-214ENST00000625244 RELQ04864 619 aaPredicted RBP9.76□□□□□ -0.85
SNX1-214ENST00000625244 SERTAD4-AS1Q5TG53 156 aa9.76□□□□□ -0.85
SNX1-214ENST00000625244 HSD17B13Q7Z5P4 300 aaPredicted RBP9.76□□□□□ -0.85
SNX1-214ENST00000625244 DUSP18Q8NEJ0 188 aa9.76□□□□□ -0.85
SNX1-214ENST00000625244 TMEM56Q96MV1 263 aa9.76□□□□□ -0.85
SNX1-214ENST00000625244 SRSF8Q9BRL6 282 aaKnown RBP9.76□□□□□ -0.85
SNX1-214ENST00000625244 HINT2Q9BX68 163 aa9.76□□□□□ -0.85
SNX1-214ENST00000625244 QTRT1Q9BXR0 403 aaKnown RBP9.76□□□□□ -0.85
SNX1-214ENST00000625244 VSIRQ9H7M9 311 aa9.76□□□□□ -0.85
SNX1-214ENST00000625244 XCL2Q9UBD3 114 aa9.76□□□□□ -0.85
SNX1-214ENST00000625244 CACFD1Q9UGQ2 172 aa9.76□□□□□ -0.85
SNX1-214ENST00000625244 OR51B2Q9Y5P1 312 aa9.76□□□□□ -0.85
SNX1-214ENST00000625244 SFT2D2O95562 160 aa9.75□□□□□ -0.85
SNX1-214ENST00000625244 IGKV1-39P01597 117 aa9.75□□□□□ -0.85
SNX1-214ENST00000625244 IGKV1D-39P04432 117 aa9.75□□□□□ -0.85
SNX1-214ENST00000625244 ZNF688P0C7X2 276 aa9.75□□□□□ -0.85
SNX1-214ENST00000625244 TRAPPC2P0DI81 140 aa9.75□□□□□ -0.85
SNX1-214ENST00000625244 TRAPPC2BP0DI82 140 aa9.75□□□□□ -0.85
SNX1-214ENST00000625244 WT1-ASQ06250 92 aa9.75□□□□□ -0.85
SNX1-214ENST00000625244 PPP1R1AQ13522 171 aa9.75□□□□□ -0.85
SNX1-214ENST00000625244 FAM222AQ5U5X8 452 aa9.75□□□□□ -0.85
SNX1-214ENST00000625244 COQ8AQ8NI60 647 aa9.75□□□□□ -0.85
SNX1-214ENST00000625244 C17orf77Q96MU5 243 aa9.75□□□□□ -0.85
SNX1-214ENST00000625244 KRTAP1-5Q9BYS1 174 aa9.75□□□□□ -0.85
SNX1-214ENST00000625244 NUDT15Q9NV35 164 aa9.75□□□□□ -0.85
SNX1-214ENST00000625244 NSG2Q9Y328 171 aa9.75□□□□□ -0.85
SNX1-214ENST00000625244 TMEM56-RWDD3S4R434 201 aa9.75□□□□□ -0.85
SNX1-214ENST00000625244 A0A0B4J2A0 478 aa9.74□□□□□ -0.85
SNX1-214ENST00000625244 DUXBA0A1W2PPF3 345 aa9.74□□□□□ -0.85
SNX1-214ENST00000625244 K7EQG2 157 aa9.74□□□□□ -0.85
SNX1-214ENST00000625244 IGKV1-5P01602 117 aa9.74□□□□□ -0.85
SNX1-214ENST00000625244 OR13C7P0DN81 318 aa9.74□□□□□ -0.85
SNX1-214ENST00000625244 SUPT4H1P63272 117 aaKnown RBP9.74□□□□□ -0.85
SNX1-214ENST00000625244 DLK1P80370 383 aa9.74□□□□□ -0.85
SNX1-214ENST00000625244 SELENOHQ8IZQ5 122 aaKnown RBP9.74□□□□□ -0.85
SNX1-214ENST00000625244 SLC35G3Q8N808 338 aa9.74□□□□□ -0.85
SNX1-214ENST00000625244 C15orf53Q8NAA6 179 aa9.74□□□□□ -0.85
SNX1-214ENST00000625244 LSM10Q969L4 123 aaKnown RBP9.74□□□□□ -0.85
SNX1-214ENST00000625244 ENY2Q9NPA8 101 aa9.74□□□□□ -0.85
SNX1-214ENST00000625244 SHPKQ9UHJ6 478 aa9.74□□□□□ -0.85
SNX1-214ENST00000625244 FLVCR2Q9UPI3 526 aa9.74□□□□□ -0.85
SNX1-214ENST00000625244 TRAV6A0A075B6T7 132 aa9.73□□□□□ -0.85
SNX1-214ENST00000625244 TEX50A0A1B0GTY4 177 aa9.73□□□□□ -0.85
SNX1-214ENST00000625244 C9orf170A2RU37 121 aa9.73□□□□□ -0.85
SNX1-214ENST00000625244 TMEM189A5PLL7 270 aa9.73□□□□□ -0.85
SNX1-214ENST00000625244 H2AFB2P0C5Z0 115 aa9.73□□□□□ -0.85
SNX1-214ENST00000625244 OR4E1P0C645 316 aa9.73□□□□□ -0.85
SNX1-214ENST00000625244 ANXA7P20073 488 aaKnown RBP9.73□□□□□ -0.85
SNX1-214ENST00000625244 ZNF705AQ6ZN79 300 aaPredicted RBP9.73□□□□□ -0.85
SNX1-214ENST00000625244 NEU1Q99519 415 aa9.73□□□□□ -0.85
SNX1-214ENST00000625244 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.73□□□□□ -0.85
SNX1-214ENST00000625244 F11RQ9Y624 299 aaKnown RBP9.73□□□□□ -0.85
SNX1-214ENST00000625244 ZNF705FA8MVS1 300 aaPredicted RBP9.72□□□□□ -0.85
SNX1-214ENST00000625244 ZNF705DP0CH99 300 aaPredicted RBP9.72□□□□□ -0.85
SNX1-214ENST00000625244 ZNF705BP0CI00 300 aaPredicted RBP9.72□□□□□ -0.85
SNX1-214ENST00000625244 SULT1A3P0DMM9 295 aa9.72□□□□□ -0.85
SNX1-214ENST00000625244 SULT1A4P0DMN0 295 aa9.72□□□□□ -0.85
SNX1-214ENST00000625244 HOXA1P49639 335 aaPredicted RBP9.72□□□□□ -0.85
SNX1-214ENST00000625244 HSPE1P61604 102 aaKnown RBP9.72□□□□□ -0.85
SNX1-214ENST00000625244 DHRS2Q13268 280 aa9.72□□□□□ -0.85
SNX1-214ENST00000625244 OXA1LQ15070 435 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms