RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 AJUBAQ96IF1 538 aa13.92□□□□□ -0.18
CNOT3-209ENST00000617930 UHRF2Q96PU4 802 aa13.92□□□□□ -0.18
CNOT3-209ENST00000617930 ANKRD17O75179 2603 aaKnown RBP13.92□□□□□ -0.18
CNOT3-209ENST00000617930 CRYGCP07315 174 aa13.91□□□□□ -0.18
CNOT3-209ENST00000617930 SLC35E1Q96K37 410 aa13.91□□□□□ -0.18
CNOT3-209ENST00000617930 IGHV3-21A0A0B4J1V1 117 aa13.91□□□□□ -0.18
CNOT3-209ENST00000617930 KIR3DL3Q8N743 410 aa13.91□□□□□ -0.18
CNOT3-209ENST00000617930 SRSF12Q8WXF0 261 aaKnown RBP13.91□□□□□ -0.18
CNOT3-209ENST00000617930 EAF1Q96JC9 268 aaPredicted RBP13.91□□□□□ -0.18
CNOT3-209ENST00000617930 RNF5Q99942 180 aa13.91□□□□□ -0.18
CNOT3-209ENST00000617930 SLC25A33Q9BSK2 321 aa13.91□□□□□ -0.18
CNOT3-209ENST00000617930 CELSR1Q9NYQ6 3014 aa13.9□□□□□ -0.18
CNOT3-209ENST00000617930 IGHV2-70DA0A0C4DH43 119 aa13.9□□□□□ -0.18
CNOT3-209ENST00000617930 MMDQ15546 238 aa13.9□□□□□ -0.18
CNOT3-209ENST00000617930 OCC1Q8TAD7 63 aa13.9□□□□□ -0.18
CNOT3-209ENST00000617930 TBX15Q96SF7 602 aa13.9□□□□□ -0.18
CNOT3-209ENST00000617930 SUB1P53999 127 aaKnown RBP eCLIP13.9□□□□□ -0.18
CNOT3-209ENST00000617930 TEX38Q6PEX7 206 aa13.9□□□□□ -0.18
CNOT3-209ENST00000617930 PATE2Q6UY27 113 aa13.9□□□□□ -0.18
CNOT3-209ENST00000617930 GBGT1Q8N5D6 347 aa13.9□□□□□ -0.18
CNOT3-209ENST00000617930 GCN1Q92616 2671 aaKnown RBP13.89□□□□□ -0.19
CNOT3-209ENST00000617930 TRAV5A0A0B4J249 113 aa13.89□□□□□ -0.19
CNOT3-209ENST00000617930 OR5G3P0C626 314 aa13.89□□□□□ -0.19
CNOT3-209ENST00000617930 THAP8Q8NA92 274 aa13.89□□□□□ -0.19
CNOT3-209ENST00000617930 NPBQ8NG41 125 aa13.89□□□□□ -0.19
CNOT3-209ENST00000617930 FAM168AQ92567 244 aa13.89□□□□□ -0.19
CNOT3-209ENST00000617930 MISP3Q96FF7 219 aa13.89□□□□□ -0.19
CNOT3-209ENST00000617930 PSMG3-AS1Q96PY0 264 aa13.89□□□□□ -0.19
CNOT3-209ENST00000617930 NDUFA3O95167 84 aa13.88□□□□□ -0.19
CNOT3-209ENST00000617930 NOL4LQ96MY1 436 aaPredicted RBP13.88□□□□□ -0.19
CNOT3-209ENST00000617930 LPAR2Q9HBW0 351 aa13.88□□□□□ -0.19
CNOT3-209ENST00000617930 NBR2O15453 112 aa13.88□□□□□ -0.19
CNOT3-209ENST00000617930 MOSP00540 346 aa13.88□□□□□ -0.19
CNOT3-209ENST00000617930 CEACAM3P40198 252 aa13.88□□□□□ -0.19
CNOT3-209ENST00000617930 C11orf52Q96A22 123 aa13.88□□□□□ -0.19
CNOT3-209ENST00000617930 FAM167A-AS1Q96KT0 104 aa13.88□□□□□ -0.19
CNOT3-209ENST00000617930 FAM103A1Q9BTL3 118 aaKnown RBP13.88□□□□□ -0.19
CNOT3-209ENST00000617930 GSX1Q9H4S2 264 aaPredicted RBP13.88□□□□□ -0.19
CNOT3-209ENST00000617930 F11RQ9Y624 299 aaKnown RBP13.88□□□□□ -0.19
CNOT3-209ENST00000617930 TCRBV4S1A1TA0A5B7 111 aa13.87□□□□□ -0.19
CNOT3-209ENST00000617930 PAX1P15863 534 aa13.87□□□□□ -0.19
CNOT3-209ENST00000617930 ADMP35318 185 aa13.87□□□□□ -0.19
CNOT3-209ENST00000617930 Q8N6K4 173 aa13.87□□□□□ -0.19
CNOT3-209ENST00000617930 IL36BQ9NZH7 164 aa13.87□□□□□ -0.19
CNOT3-209ENST00000617930 C9JCJ5 164 aa13.86□□□□□ -0.19
CNOT3-209ENST00000617930 TOX4O94842 621 aa13.86□□□□□ -0.19
CNOT3-209ENST00000617930 PLGLAQ15195 96 aa13.86□□□□□ -0.19
CNOT3-209ENST00000617930 IQCJQ1A5X6 159 aa13.86□□□□□ -0.19
CNOT3-209ENST00000617930 ZNF664Q8N3J9 261 aa13.86□□□□□ -0.19
CNOT3-209ENST00000617930 TMEM167BQ9NRX6 74 aa13.86□□□□□ -0.19
CNOT3-209ENST00000617930 TRAV9-1A0A075B6T8 112 aa13.86□□□□□ -0.19
CNOT3-209ENST00000617930 K7EN84 100 aa13.86□□□□□ -0.19
CNOT3-209ENST00000617930 PIMREGQ9BSJ6 248 aa13.86□□□□□ -0.19
CNOT3-209ENST00000617930 LY96Q9Y6Y9 160 aa13.86□□□□□ -0.19
CNOT3-209ENST00000617930 ARL2-SNX15V9GYD0 113 aa13.86□□□□□ -0.19
CNOT3-209ENST00000617930 SLC17A3O00476 420 aa13.85□□□□□ -0.19
CNOT3-209ENST00000617930 YPEL3P61236 119 aaPredicted RBP13.85□□□□□ -0.19
CNOT3-209ENST00000617930 HES1Q14469 280 aa13.85□□□□□ -0.19
CNOT3-209ENST00000617930 FAM120AOSQ5T036 256 aa13.85□□□□□ -0.19
CNOT3-209ENST00000617930 TMEM116Q8NCL8 245 aa13.85□□□□□ -0.19
CNOT3-209ENST00000617930 SLC25A2Q9BXI2 301 aa13.85□□□□□ -0.19
CNOT3-209ENST00000617930 OR10J4P0C629 311 aa13.85□□□□□ -0.19
CNOT3-209ENST00000617930 NDPQ00604 133 aa13.85□□□□□ -0.19
CNOT3-209ENST00000617930 EBI3Q14213 229 aa13.85□□□□□ -0.19
CNOT3-209ENST00000617930 C5orf64Q2M2E5 130 aa13.85□□□□□ -0.19
CNOT3-209ENST00000617930 RPEL1Q2QD12 228 aa13.85□□□□□ -0.19
CNOT3-209ENST00000617930 ASPHD1Q5U4P2 390 aa13.85□□□□□ -0.19
CNOT3-209ENST00000617930 WNT10AQ9GZT5 417 aa13.85□□□□□ -0.19
CNOT3-209ENST00000617930 DNAJC4Q9NNZ3 241 aa13.85□□□□□ -0.19
CNOT3-209ENST00000617930 TECRQ9NZ01 308 aaKnown RBP13.85□□□□□ -0.19
CNOT3-209ENST00000617930 NAV2Q8IVL1 2488 aa13.84□□□□□ -0.19
CNOT3-209ENST00000617930 A0A096LNT2 108 aa13.84□□□□□ -0.19
CNOT3-209ENST00000617930 A0A1B0GUS0 222 aa13.84□□□□□ -0.19
CNOT3-209ENST00000617930 A8MWP6 167 aa13.84□□□□□ -0.19
CNOT3-209ENST00000617930 I3L2K1 104 aa13.84□□□□□ -0.19
CNOT3-209ENST00000617930 OR7C2O60412 319 aa13.84□□□□□ -0.19
CNOT3-209ENST00000617930 SCGB1D1O95968 90 aa13.84□□□□□ -0.19
CNOT3-209ENST00000617930 GNG4P50150 75 aa13.84□□□□□ -0.19
CNOT3-209ENST00000617930 MINOS1Q5TGZ0 78 aa13.84□□□□□ -0.19
CNOT3-209ENST00000617930 CLEC2AQ6UVW9 174 aa13.84□□□□□ -0.19
CNOT3-209ENST00000617930 TMEM256Q8N2U0 113 aa13.84□□□□□ -0.19
CNOT3-209ENST00000617930 PIP4P2Q8N4L2 257 aa13.84□□□□□ -0.19
CNOT3-209ENST00000617930 MINOS1-NBL1R4GNA1 71 aa13.84□□□□□ -0.19
CNOT3-209ENST00000617930 CNIH1O95406 144 aa13.83□□□□□ -0.2
CNOT3-209ENST00000617930 CBLN1P23435 193 aa13.83□□□□□ -0.2
CNOT3-209ENST00000617930 UBE2E1P51965 193 aa13.83□□□□□ -0.2
CNOT3-209ENST00000617930 ERVFC1-1P60608 527 aa13.83□□□□□ -0.2
CNOT3-209ENST00000617930 FXYD3Q14802 87 aa13.83□□□□□ -0.2
CNOT3-209ENST00000617930 KLF17Q5JT82 389 aaPredicted RBP13.83□□□□□ -0.2
CNOT3-209ENST00000617930 ZNF600Q6ZNG1 722 aa13.83□□□□□ -0.2
CNOT3-209ENST00000617930 OR1L6Q8NGR2 347 aa13.83□□□□□ -0.2
CNOT3-209ENST00000617930 CMTM2Q8TAZ6 248 aa13.83□□□□□ -0.2
CNOT3-209ENST00000617930 TNFRSF19Q9NS68 423 aa13.83□□□□□ -0.2
CNOT3-209ENST00000617930 ABCA1O95477 2261 aa13.83□□□□□ -0.2
CNOT3-209ENST00000617930 ZNF469Q96JG9 3925 aaPredicted RBP13.83□□□□□ -0.2
CNOT3-209ENST00000617930 ZANQ9Y493 2812 aa13.83□□□□□ -0.2
CNOT3-209ENST00000617930 A0A1B0GV90 55 aa13.83□□□□□ -0.2
CNOT3-209ENST00000617930 GRIFINA4D1Z8 144 aa13.83□□□□□ -0.2
CNOT3-209ENST00000617930 C8orf88P0DMB2 117 aa13.83□□□□□ -0.2
CNOT3-209ENST00000617930 TAS2R45P59539 299 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms