RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 OR8G2PQ6IF36 304 aa7.07□□□□□ -1.28
TARDBP-218ENST00000617172 TMED4Q7Z7H5 227 aa7.07□□□□□ -1.28
TARDBP-218ENST00000617172 LRTM2Q8N967 370 aa7.07□□□□□ -1.28
TARDBP-218ENST00000617172 SLC35E1Q96K37 410 aa7.07□□□□□ -1.28
TARDBP-218ENST00000617172 CIB3Q96Q77 187 aaPredicted RBP7.07□□□□□ -1.28
TARDBP-218ENST00000617172 NRN1Q9NPD7 142 aa7.07□□□□□ -1.28
TARDBP-218ENST00000617172 PRR13Q9NZ81 148 aa7.07□□□□□ -1.28
TARDBP-218ENST00000617172 TMED3Q9Y3Q3 217 aa7.07□□□□□ -1.28
TARDBP-218ENST00000617172 LYSTQ99698 3801 aa7.06□□□□□ -1.28
TARDBP-218ENST00000617172 CCDC160A6NGH7 325 aa7.06□□□□□ -1.28
TARDBP-218ENST00000617172 ZFP92A6NM28 416 aa7.06□□□□□ -1.28
TARDBP-218ENST00000617172 SNRPGP15A8MWD9 76 aa7.06□□□□□ -1.28
TARDBP-218ENST00000617172 PITX3O75364 302 aa7.06□□□□□ -1.28
TARDBP-218ENST00000617172 MIFP14174 115 aa7.06□□□□□ -1.28
TARDBP-218ENST00000617172 GAMTQ14353 236 aa7.06□□□□□ -1.28
TARDBP-218ENST00000617172 USF2Q15853 346 aaPredicted RBP7.06□□□□□ -1.28
TARDBP-218ENST00000617172 ACTL10Q5JWF8 245 aa7.06□□□□□ -1.28
TARDBP-218ENST00000617172 C1orf194Q5T5A4 169 aa7.06□□□□□ -1.28
TARDBP-218ENST00000617172 SIGLEC15Q6ZMC9 328 aa7.06□□□□□ -1.28
TARDBP-218ENST00000617172 CENPSQ8N2Z9 138 aa7.06□□□□□ -1.28
TARDBP-218ENST00000617172 TRIM63Q969Q1 353 aa7.06□□□□□ -1.28
TARDBP-218ENST00000617172 RNF125Q96EQ8 232 aa7.06□□□□□ -1.28
TARDBP-218ENST00000617172 RAB40CQ96S21 281 aa7.06□□□□□ -1.28
TARDBP-218ENST00000617172 C1QTNF4Q9BXJ3 329 aa7.06□□□□□ -1.28
TARDBP-218ENST00000617172 HRH4Q9H3N8 390 aa7.06□□□□□ -1.28
TARDBP-218ENST00000617172 V9GYH0 126 aa7.06□□□□□ -1.28
TARDBP-218ENST00000617172 RYR2Q92736 4967 aa7.05□□□□□ -1.28
TARDBP-218ENST00000617172 KNCNA6PVL3 124 aa7.05□□□□□ -1.28
TARDBP-218ENST00000617172 C11orf94C9JXX5 98 aa7.05□□□□□ -1.28
TARDBP-218ENST00000617172 ZNF701M0R085 212 aaPredicted RBP7.05□□□□□ -1.28
TARDBP-218ENST00000617172 CFDP00746 253 aaPredicted RBP7.05□□□□□ -1.28
TARDBP-218ENST00000617172 GIG44P09565 113 aaPredicted RBP7.05□□□□□ -1.28
TARDBP-218ENST00000617172 VAMP1P23763 118 aa7.05□□□□□ -1.28
TARDBP-218ENST00000617172 PSMG4Q5JS54 123 aa7.05□□□□□ -1.28
TARDBP-218ENST00000617172 SPANXN2Q5MJ10 180 aa7.05□□□□□ -1.28
TARDBP-218ENST00000617172 LGALS9CQ6DKI2 356 aa7.05□□□□□ -1.28
TARDBP-218ENST00000617172 FBXL17Q9UF56 701 aa7.05□□□□□ -1.28
TARDBP-218ENST00000617172 ZNF705EA8MWA4 302 aaPredicted RBP7.04□□□□□ -1.28
TARDBP-218ENST00000617172 SFT2D2O95562 160 aa7.04□□□□□ -1.28
TARDBP-218ENST00000617172 S100A7P31151 101 aa7.04□□□□□ -1.28
TARDBP-218ENST00000617172 ID1P41134 155 aa7.04□□□□□ -1.28
TARDBP-218ENST00000617172 NKX2-1P43699 371 aaPredicted RBP7.04□□□□□ -1.28
TARDBP-218ENST00000617172 NANOS2P60321 138 aaKnown RBP7.04□□□□□ -1.28
TARDBP-218ENST00000617172 UBE2MP61081 183 aaKnown RBP7.04□□□□□ -1.28
TARDBP-218ENST00000617172 ZNF79Q15937 498 aa7.04□□□□□ -1.28
TARDBP-218ENST00000617172 SAMD13Q5VXD3 122 aa7.04□□□□□ -1.28
TARDBP-218ENST00000617172 GGNBP1Q5YKI7 109 aa7.04□□□□□ -1.28
TARDBP-218ENST00000617172 CCDC190Q86UF4 302 aa7.04□□□□□ -1.28
TARDBP-218ENST00000617172 Q8NAQ8 132 aa7.04□□□□□ -1.28
TARDBP-218ENST00000617172 C2CD4CQ8TF44 421 aa7.04□□□□□ -1.28
TARDBP-218ENST00000617172 TRGV9Q99603 122 aa7.04□□□□□ -1.28
TARDBP-218ENST00000617172 PBDC1Q9BVG4 233 aa7.04□□□□□ -1.28
TARDBP-218ENST00000617172 TBC1D24Q9ULP9 559 aa7.04□□□□□ -1.28
TARDBP-218ENST00000617172 SACSQ9NZJ4 4579 aa7.04□□□□□ -1.28
TARDBP-218ENST00000617172 NAP1L6A6NFF2 107 aa7.03□□□□□ -1.28
TARDBP-218ENST00000617172 DEFB4AO15263 64 aa7.03□□□□□ -1.28
TARDBP-218ENST00000617172 SYNGR2O43760 224 aa7.03□□□□□ -1.28
TARDBP-218ENST00000617172 INPP1P49441 399 aa7.03□□□□□ -1.28
TARDBP-218ENST00000617172 ZNF90Q03938 601 aa7.03□□□□□ -1.28
TARDBP-218ENST00000617172 PPP1R1AQ13522 171 aa7.03□□□□□ -1.28
TARDBP-218ENST00000617172 CSNK1G2-AS1Q8NCQ2 148 aa7.03□□□□□ -1.28
TARDBP-218ENST00000617172 DYNC2H1Q8NCM8 4307 aaKnown RBP7.03□□□□□ -1.28
TARDBP-218ENST00000617172 IGKV1D-37A0A075B6S9 117 aa7.02□□□□□ -1.29
TARDBP-218ENST00000617172 IGHV4-28A0A0C4DH34 117 aa7.02□□□□□ -1.29
TARDBP-218ENST00000617172 H3BMM0 161 aa7.02□□□□□ -1.29
TARDBP-218ENST00000617172 IAPPP10997 89 aa7.02□□□□□ -1.29
TARDBP-218ENST00000617172 HLA-DRB4P13762 266 aa7.02□□□□□ -1.29
TARDBP-218ENST00000617172 LYZP61626 148 aa7.02□□□□□ -1.29
TARDBP-218ENST00000617172 SPATA31B1PQ5VZV4 182 aa7.02□□□□□ -1.29
TARDBP-218ENST00000617172 OR8I2Q8N0Y5 310 aa7.02□□□□□ -1.29
TARDBP-218ENST00000617172 THAP8Q8NA92 274 aa7.02□□□□□ -1.29
TARDBP-218ENST00000617172 PPP1R14BQ96C90 147 aa7.02□□□□□ -1.29
TARDBP-218ENST00000617172 CLUHP3Q96NS8 147 aa7.02□□□□□ -1.29
TARDBP-218ENST00000617172 PAIP2BQ9ULR5 123 aaKnown RBP7.02□□□□□ -1.29
TARDBP-218ENST00000617172 SLC45A2Q9UMX9 530 aa7.02□□□□□ -1.29
TARDBP-218ENST00000617172 HLA-DRB4X5D2U9 266 aa7.02□□□□□ -1.29
TARDBP-218ENST00000617172 C9orf170A2RU37 121 aa7.01□□□□□ -1.29
TARDBP-218ENST00000617172 CENPXA8MT69 81 aa7.01□□□□□ -1.29
TARDBP-218ENST00000617172 WRBO00258 174 aa7.01□□□□□ -1.29
TARDBP-218ENST00000617172 ISLRO14498 428 aa7.01□□□□□ -1.29
TARDBP-218ENST00000617172 NDUFB6O95139 128 aa7.01□□□□□ -1.29
TARDBP-218ENST00000617172 IFNA21P01568 189 aa7.01□□□□□ -1.29
TARDBP-218ENST00000617172 HOXB5P09067 269 aa7.01□□□□□ -1.29
TARDBP-218ENST00000617172 RBMY1A1P0DJD3 496 aaKnown RBP7.01□□□□□ -1.29
TARDBP-218ENST00000617172 RBMY1CP0DJD4 496 aa7.01□□□□□ -1.29
TARDBP-218ENST00000617172 C4BPBP20851 252 aa7.01□□□□□ -1.29
TARDBP-218ENST00000617172 PSMB3P49720 205 aa7.01□□□□□ -1.29
TARDBP-218ENST00000617172 MEOX2P50222 304 aa7.01□□□□□ -1.29
TARDBP-218ENST00000617172 ID3Q02535 119 aa7.01□□□□□ -1.29
TARDBP-218ENST00000617172 RBMY1FQ15415 496 aaKnown RBP7.01□□□□□ -1.29
TARDBP-218ENST00000617172 CNPY1Q3B7I2 92 aa7.01□□□□□ -1.29
TARDBP-218ENST00000617172 FOXI2Q6ZQN5 318 aa7.01□□□□□ -1.29
TARDBP-218ENST00000617172 COQ8AQ8NI60 647 aa7.01□□□□□ -1.29
TARDBP-218ENST00000617172 SRRQ9GZT4 340 aa7.01□□□□□ -1.29
TARDBP-218ENST00000617172 RBM38Q9H0Z9 239 aaKnown RBP7.01□□□□□ -1.29
TARDBP-218ENST00000617172 CLEC5AQ9NY25 188 aa7.01□□□□□ -1.29
TARDBP-218ENST00000617172 STRAPQ9Y3F4 350 aaKnown RBP7.01□□□□□ -1.29
TARDBP-218ENST00000617172 X6R8D5 127 aa7.01□□□□□ -1.29
TARDBP-218ENST00000617172 IGKV1OR2-108A0A075B7D4 117 aa7□□□□□ -1.29
TARDBP-218ENST00000617172 TRAV10A0A0B4J240 114 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms