RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 PSMB11A5LHX3 300 aa6.99□□□□□ -1.29
CCDC47-207ENST00000612558 SMAD7O15105 426 aaKnown RBP6.99□□□□□ -1.29
CCDC47-207ENST00000612558 IGHG2P01859 326 aa6.99□□□□□ -1.29
CCDC47-207ENST00000612558 FABP1P07148 127 aa6.99□□□□□ -1.29
CCDC47-207ENST00000612558 OR5G3P0C626 314 aa6.99□□□□□ -1.29
CCDC47-207ENST00000612558 IGLC1P0CG04 106 aa6.99□□□□□ -1.29
CCDC47-207ENST00000612558 MFAP4P55083 255 aa6.99□□□□□ -1.29
CCDC47-207ENST00000612558 RXFP4Q8TDU9 374 aa6.99□□□□□ -1.29
CCDC47-207ENST00000612558 TMEM37Q8WXS4 190 aa6.99□□□□□ -1.29
CCDC47-207ENST00000612558 ZNF48Q96MX3 618 aaPredicted RBP6.99□□□□□ -1.29
CCDC47-207ENST00000612558 PFDN5Q99471 154 aa6.99□□□□□ -1.29
CCDC47-207ENST00000612558 MRPL32Q9BYC8 188 aaKnown RBP6.99□□□□□ -1.29
CCDC47-207ENST00000612558 MANBALQ9NQG1 85 aa6.99□□□□□ -1.29
CCDC47-207ENST00000612558 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.99□□□□□ -1.29
CCDC47-207ENST00000612558 TRAV41A0A0B4J266 112 aa6.98□□□□□ -1.29
CCDC47-207ENST00000612558 G3V318 75 aa6.98□□□□□ -1.29
CCDC47-207ENST00000612558 COX7A2P2O60397 106 aa6.98□□□□□ -1.29
CCDC47-207ENST00000612558 OR2J3O76001 311 aa6.98□□□□□ -1.29
CCDC47-207ENST00000612558 NDUFB8O95169 186 aa6.98□□□□□ -1.29
CCDC47-207ENST00000612558 IGHV4-59P01825 116 aa6.98□□□□□ -1.29
CCDC47-207ENST00000612558 IGF1P05019 195 aa6.98□□□□□ -1.29
CCDC47-207ENST00000612558 SRP19P09132 144 aaKnown RBP6.98□□□□□ -1.29
CCDC47-207ENST00000612558 ARL14EPLP0DKL9 152 aa6.98□□□□□ -1.29
CCDC47-207ENST00000612558 TAS2R45P59539 299 aa6.98□□□□□ -1.29
CCDC47-207ENST00000612558 DEFA5Q01523 94 aa6.98□□□□□ -1.29
CCDC47-207ENST00000612558 C9orf152Q5JTZ5 239 aa6.98□□□□□ -1.29
CCDC47-207ENST00000612558 C10orf113Q5VZT2 155 aa6.98□□□□□ -1.29
CCDC47-207ENST00000612558 SPATA31B1PQ5VZV4 182 aa6.98□□□□□ -1.29
CCDC47-207ENST00000612558 Q6YL49 198 aa6.98□□□□□ -1.29
CCDC47-207ENST00000612558 SPNS3Q6ZMD2 512 aa6.98□□□□□ -1.29
CCDC47-207ENST00000612558 MIR17HGQ75NE6 70 aa6.98□□□□□ -1.29
CCDC47-207ENST00000612558 IQCF2Q8IXL9 164 aa6.98□□□□□ -1.29
CCDC47-207ENST00000612558 SVBPQ8N300 66 aa6.98□□□□□ -1.29
CCDC47-207ENST00000612558 VN1R17PQ8TDU5 208 aa6.98□□□□□ -1.29
CCDC47-207ENST00000612558 TXN2Q99757 166 aa6.98□□□□□ -1.29
CCDC47-207ENST00000612558 PRDM13Q9H4Q3 707 aa6.98□□□□□ -1.29
CCDC47-207ENST00000612558 GSX1Q9H4S2 264 aaPredicted RBP6.98□□□□□ -1.29
CCDC47-207ENST00000612558 C21orf62Q9NYP8 219 aa6.98□□□□□ -1.29
CCDC47-207ENST00000612558 TECRQ9NZ01 308 aaKnown RBP6.98□□□□□ -1.29
CCDC47-207ENST00000612558 FBXL7Q9UJT9 491 aa6.98□□□□□ -1.29
CCDC47-207ENST00000612558 FLNAP21333 2647 aaKnown RBP6.97□□□□□ -1.29
CCDC47-207ENST00000612558 TRBV9A0A0B4J1U6 114 aa6.97□□□□□ -1.29
CCDC47-207ENST00000612558 GNG7O60262 68 aa6.97□□□□□ -1.29
CCDC47-207ENST00000612558 NDUFS6O75380 124 aaKnown RBP6.97□□□□□ -1.29
CCDC47-207ENST00000612558 SCGB2A1O75556 95 aa6.97□□□□□ -1.29
CCDC47-207ENST00000612558 IGKV1-17P01599 117 aa6.97□□□□□ -1.29
CCDC47-207ENST00000612558 RD3LP0DJH9 198 aa6.97□□□□□ -1.29
CCDC47-207ENST00000612558 C8orf88P0DMB2 117 aa6.97□□□□□ -1.29
CCDC47-207ENST00000612558 GCHFRP30047 84 aa6.97□□□□□ -1.29
CCDC47-207ENST00000612558 FCGR2BP31994 310 aaPredicted RBP6.97□□□□□ -1.29
CCDC47-207ENST00000612558 PLP1P60201 277 aa6.97□□□□□ -1.29
CCDC47-207ENST00000612558 MEF2BQ02080 365 aaPredicted RBP6.97□□□□□ -1.29
CCDC47-207ENST00000612558 TIGITQ495A1 244 aa6.97□□□□□ -1.29
CCDC47-207ENST00000612558 C19orf54Q5BKX5 351 aa6.97□□□□□ -1.29
CCDC47-207ENST00000612558 SOHLH1Q5JUK2 328 aa6.97□□□□□ -1.29
CCDC47-207ENST00000612558 PATE2Q6UY27 113 aa6.97□□□□□ -1.29
CCDC47-207ENST00000612558 PQLC2Q6ZP29 291 aa6.97□□□□□ -1.29
CCDC47-207ENST00000612558 NECAP1Q8NC96 275 aa6.97□□□□□ -1.29
CCDC47-207ENST00000612558 ZNF355PQ9NSJ1 428 aa6.97□□□□□ -1.29
CCDC47-207ENST00000612558 AKAP9Q99996 3911 aa6.97□□□□□ -1.29
CCDC47-207ENST00000612558 PAGE4O60829 102 aa6.96□□□□□ -1.29
CCDC47-207ENST00000612558 HYPMO75409 117 aa6.96□□□□□ -1.29
CCDC47-207ENST00000612558 PSG1P11464 419 aa6.96□□□□□ -1.29
CCDC47-207ENST00000612558 ORM2P19652 201 aa6.96□□□□□ -1.29
CCDC47-207ENST00000612558 YPEL3P61236 119 aaPredicted RBP6.96□□□□□ -1.29
CCDC47-207ENST00000612558 BLCAPP62952 87 aa6.96□□□□□ -1.29
CCDC47-207ENST00000612558 GUCA2BQ16661 112 aa6.96□□□□□ -1.29
CCDC47-207ENST00000612558 Q56UQ5 140 aa6.96□□□□□ -1.29
CCDC47-207ENST00000612558 OR1B1Q8NGR6 318 aa6.96□□□□□ -1.29
CCDC47-207ENST00000612558 TXNDC17Q9BRA2 123 aa6.96□□□□□ -1.29
CCDC47-207ENST00000612558 TMEM167BQ9NRX6 74 aa6.96□□□□□ -1.29
CCDC47-207ENST00000612558 DOK5Q9P104 306 aa6.96□□□□□ -1.29
CCDC47-207ENST00000612558 NOTCH2Q04721 2471 aa6.96□□□□□ -1.3
CCDC47-207ENST00000612558 ACANP16112 2415 aa6.95□□□□□ -1.3
CCDC47-207ENST00000612558 AP4M1O00189 453 aa6.95□□□□□ -1.3
CCDC47-207ENST00000612558 CD5LO43866 347 aa6.95□□□□□ -1.3
CCDC47-207ENST00000612558 SNAPINO95295 136 aa6.95□□□□□ -1.3
CCDC47-207ENST00000612558 BRI3O95415 125 aa6.95□□□□□ -1.3
CCDC47-207ENST00000612558 TOMM40O96008 361 aa6.95□□□□□ -1.3
CCDC47-207ENST00000612558 CD81P60033 236 aa6.95□□□□□ -1.3
CCDC47-207ENST00000612558 RHOGP84095 191 aa6.95□□□□□ -1.3
CCDC47-207ENST00000612558 C15orf32Q32M92 178 aa6.95□□□□□ -1.3
CCDC47-207ENST00000612558 LINC00305Q7Z4B0 112 aa6.95□□□□□ -1.3
CCDC47-207ENST00000612558 CYB561D1Q8N8Q1 229 aa6.95□□□□□ -1.3
CCDC47-207ENST00000612558 OR51G1Q8NGK1 321 aa6.95□□□□□ -1.3
CCDC47-207ENST00000612558 SUN5Q8TC36 379 aa6.95□□□□□ -1.3
CCDC47-207ENST00000612558 GAR1Q9NY12 217 aaKnown RBP6.95□□□□□ -1.3
CCDC47-207ENST00000612558 VPREB3Q9UKI3 123 aa6.95□□□□□ -1.3
CCDC47-207ENST00000612558 S4R3C0 116 aa6.95□□□□□ -1.3
CCDC47-207ENST00000612558 SONP18583 2426 aaKnown RBP6.95□□□□□ -1.3
CCDC47-207ENST00000612558 TRBV7-1A0A0A6YYK4 115 aa6.95□□□□□ -1.3
CCDC47-207ENST00000612558 TRAV5A0A0B4J249 113 aa6.95□□□□□ -1.3
CCDC47-207ENST00000612558 FAM223BA6NKX1 122 aa6.95□□□□□ -1.3
CCDC47-207ENST00000612558 C11orf94C9JXX5 98 aa6.95□□□□□ -1.3
CCDC47-207ENST00000612558 TMEM250H0YL14 139 aa6.95□□□□□ -1.3
CCDC47-207ENST00000612558 H3BUA1 57 aa6.95□□□□□ -1.3
CCDC47-207ENST00000612558 OR7C2O60412 319 aa6.95□□□□□ -1.3
CCDC47-207ENST00000612558 CTSGP08311 255 aa6.95□□□□□ -1.3
CCDC47-207ENST00000612558 CEBPGP53567 150 aa6.95□□□□□ -1.3
CCDC47-207ENST00000612558 UBE2G2P60604 165 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms