RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 CENPXA8MT69 81 aa13.36□□□□□ -0.27
VCX3A-203ENST00000612369 NDUFB6O95139 128 aa13.36□□□□□ -0.27
VCX3A-203ENST00000612369 DHRS2Q13268 280 aa13.36□□□□□ -0.27
VCX3A-203ENST00000612369 OR8G2PQ6IF36 304 aa13.36□□□□□ -0.27
VCX3A-203ENST00000612369 RNF125Q96EQ8 232 aa13.36□□□□□ -0.27
VCX3A-203ENST00000612369 RARRES2Q99969 163 aa13.36□□□□□ -0.27
VCX3A-203ENST00000612369 SEPSECSQ9HD40 501 aaKnown RBP13.36□□□□□ -0.27
VCX3A-203ENST00000612369 NDUFA13Q9P0J0 144 aa13.36□□□□□ -0.27
VCX3A-203ENST00000612369 RYR2Q92736 4967 aa13.36□□□□□ -0.27
VCX3A-203ENST00000612369 C9orf170A2RU37 121 aa13.35□□□□□ -0.27
VCX3A-203ENST00000612369 SYNGR2O43760 224 aa13.35□□□□□ -0.27
VCX3A-203ENST00000612369 CA1P00915 261 aaPredicted RBP13.35□□□□□ -0.27
VCX3A-203ENST00000612369 HOXB5P09067 269 aa13.35□□□□□ -0.27
VCX3A-203ENST00000612369 TMEM41BQ5BJD5 291 aa13.35□□□□□ -0.27
VCX3A-203ENST00000612369 GGNBP1Q5YKI7 109 aa13.35□□□□□ -0.27
VCX3A-203ENST00000612369 MORN3Q6PF18 240 aaPredicted RBP13.35□□□□□ -0.27
VCX3A-203ENST00000612369 C7orf50Q9BRJ6 194 aaKnown RBP13.35□□□□□ -0.27
VCX3A-203ENST00000612369 CXorf65A6NEN9 183 aa13.34□□□□□ -0.27
VCX3A-203ENST00000612369 NUPR2A6NF83 97 aa13.34□□□□□ -0.27
VCX3A-203ENST00000612369 ZNF688P0C7X2 276 aa13.34□□□□□ -0.27
VCX3A-203ENST00000612369 IAPPP10997 89 aa13.34□□□□□ -0.27
VCX3A-203ENST00000612369 CNPY1Q3B7I2 92 aa13.34□□□□□ -0.27
VCX3A-203ENST00000612369 SIGLEC15Q6ZMC9 328 aa13.34□□□□□ -0.27
VCX3A-203ENST00000612369 TRPT1Q86TN4 253 aaKnown RBP13.34□□□□□ -0.27
VCX3A-203ENST00000612369 IGKV1D-37A0A075B6S9 117 aa13.33□□□□□ -0.28
VCX3A-203ENST00000612369 SNRPGP15A8MWD9 76 aa13.33□□□□□ -0.28
VCX3A-203ENST00000612369 SPP1P10451 314 aa13.33□□□□□ -0.28
VCX3A-203ENST00000612369 SNRPD3P62318 126 aaKnown RBP13.33□□□□□ -0.28
VCX3A-203ENST00000612369 EWSR1Q01844 656 aaKnown RBP eCLIP13.33□□□□□ -0.28
VCX3A-203ENST00000612369 OR11H2Q8NH07 326 aa13.33□□□□□ -0.28
VCX3A-203ENST00000612369 COQ8AQ8NI60 647 aa13.33□□□□□ -0.28
VCX3A-203ENST00000612369 TRGV9Q99603 122 aa13.33□□□□□ -0.28
VCX3A-203ENST00000612369 SDHCQ99643 169 aaPredicted RBP13.33□□□□□ -0.28
VCX3A-203ENST00000612369 NRN1Q9NPD7 142 aa13.33□□□□□ -0.28
VCX3A-203ENST00000612369 CFDP00746 253 aaPredicted RBP13.32□□□□□ -0.28
VCX3A-203ENST00000612369 OR4E1P0C645 316 aa13.32□□□□□ -0.28
VCX3A-203ENST00000612369 ZNF90Q03938 601 aa13.32□□□□□ -0.28
VCX3A-203ENST00000612369 PMS2P11Q13670 270 aa13.32□□□□□ -0.28
VCX3A-203ENST00000612369 PBDC1Q9BVG4 233 aa13.32□□□□□ -0.28
VCX3A-203ENST00000612369 MAGT1Q9H0U3 335 aa13.32□□□□□ -0.28
VCX3A-203ENST00000612369 C11orf68Q9H3H3 251 aaKnown RBP13.32□□□□□ -0.28
VCX3A-203ENST00000612369 PAIP2BQ9ULR5 123 aaKnown RBP13.32□□□□□ -0.28
VCX3A-203ENST00000612369 DNAH1Q9P2D7 4330 aa13.32□□□□□ -0.28
VCX3A-203ENST00000612369 WRBO00258 174 aa13.31□□□□□ -0.28
VCX3A-203ENST00000612369 IFNA21P01568 189 aa13.31□□□□□ -0.28
VCX3A-203ENST00000612369 ID3Q02535 119 aa13.31□□□□□ -0.28
VCX3A-203ENST00000612369 CEMP1Q6PRD7 247 aaPredicted RBP13.31□□□□□ -0.28
VCX3A-203ENST00000612369 THAP8Q8NA92 274 aa13.31□□□□□ -0.28
VCX3A-203ENST00000612369 FBXL17Q9UF56 701 aa13.31□□□□□ -0.28
VCX3A-203ENST00000612369 PRSS46E5RG02 174 aa13.3□□□□□ -0.28
VCX3A-203ENST00000612369 IL7P13232 177 aa13.3□□□□□ -0.28
VCX3A-203ENST00000612369 PSMG4Q5JS54 123 aa13.3□□□□□ -0.28
VCX3A-203ENST00000612369 ACTL10Q5JWF8 245 aa13.3□□□□□ -0.28
VCX3A-203ENST00000612369 C1orf194Q5T5A4 169 aa13.3□□□□□ -0.28
VCX3A-203ENST00000612369 RAB40CQ96S21 281 aa13.3□□□□□ -0.28
VCX3A-203ENST00000612369 FLVCR2Q9UPI3 526 aa13.3□□□□□ -0.28
VCX3A-203ENST00000612369 KLK5Q9Y337 293 aaPredicted RBP13.3□□□□□ -0.28
VCX3A-203ENST00000612369 STRAPQ9Y3F4 350 aaKnown RBP13.3□□□□□ -0.28
VCX3A-203ENST00000612369 LINC00854A0A1B0GVQ3 168 aa13.29□□□□□ -0.28
VCX3A-203ENST00000612369 KNCNA6PVL3 124 aa13.29□□□□□ -0.28
VCX3A-203ENST00000612369 ADAP1O75689 374 aa13.29□□□□□ -0.28
VCX3A-203ENST00000612369 BTCP35070 178 aa13.29□□□□□ -0.28
VCX3A-203ENST00000612369 NKX2-1P43699 371 aaPredicted RBP13.29□□□□□ -0.28
VCX3A-203ENST00000612369 SPANXN5Q5MJ07 72 aa13.29□□□□□ -0.28
VCX3A-203ENST00000612369 MFFQ9GZY8 342 aa13.29□□□□□ -0.28
VCX3A-203ENST00000612369 AGRNO00468 2067 aa13.28□□□□□ -0.28
VCX3A-203ENST00000612369 IGKV1OR2-108A0A075B7D4 117 aa13.28□□□□□ -0.28
VCX3A-203ENST00000612369 GIG44P09565 113 aaPredicted RBP13.28□□□□□ -0.28
VCX3A-203ENST00000612369 LYZP61626 148 aa13.28□□□□□ -0.28
VCX3A-203ENST00000612369 C4orf46Q504U0 113 aa13.28□□□□□ -0.28
VCX3A-203ENST00000612369 SLC45A2Q9UMX9 530 aa13.28□□□□□ -0.28
VCX3A-203ENST00000612369 NUTF2P61970 127 aaKnown RBP13.27□□□□□ -0.29
VCX3A-203ENST00000612369 OR2F1Q13607 317 aa13.27□□□□□ -0.29
VCX3A-203ENST00000612369 OR4D5Q8NGN0 318 aa13.27□□□□□ -0.29
VCX3A-203ENST00000612369 C11orf45Q8TAV5 145 aa13.27□□□□□ -0.29
VCX3A-203ENST00000612369 PLECQ15149 4684 aaKnown RBP13.26□□□□□ -0.29
VCX3A-203ENST00000612369 MIFP14174 115 aa13.26□□□□□ -0.29
VCX3A-203ENST00000612369 ANXA7P20073 488 aaKnown RBP13.26□□□□□ -0.29
VCX3A-203ENST00000612369 S100A7P31151 101 aa13.26□□□□□ -0.29
VCX3A-203ENST00000612369 ID1P41134 155 aa13.26□□□□□ -0.29
VCX3A-203ENST00000612369 POLR2GP62487 172 aaKnown RBP eCLIP13.26□□□□□ -0.29
VCX3A-203ENST00000612369 SAMD13Q5VXD3 122 aa13.26□□□□□ -0.29
VCX3A-203ENST00000612369 PHLDA1Q8WV24 401 aaPredicted RBP13.26□□□□□ -0.29
VCX3A-203ENST00000612369 PPP1R14BQ96C90 147 aa13.26□□□□□ -0.29
VCX3A-203ENST00000612369 SMIM8Q96KF7 97 aa13.26□□□□□ -0.29
VCX3A-203ENST00000612369 C1QTNF4Q9BXJ3 329 aa13.26□□□□□ -0.29
VCX3A-203ENST00000612369 ZNF705EA8MWA4 302 aaPredicted RBP13.25□□□□□ -0.29
VCX3A-203ENST00000612369 H3BP45 60 aa13.25□□□□□ -0.29
VCX3A-203ENST00000612369 C4BPBP20851 252 aa13.25□□□□□ -0.29
VCX3A-203ENST00000612369 AKR1C1Q04828 323 aa13.25□□□□□ -0.29
VCX3A-203ENST00000612369 TMEM144Q7Z5S9 345 aa13.25□□□□□ -0.29
VCX3A-203ENST00000612369 OR8I2Q8N0Y5 310 aa13.25□□□□□ -0.29
VCX3A-203ENST00000612369 BPIFCQ8NFQ6 507 aa13.25□□□□□ -0.29
VCX3A-203ENST00000612369 MITD1Q8WV92 249 aa13.25□□□□□ -0.29
VCX3A-203ENST00000612369 LINC00476Q8WZB0 136 aa13.25□□□□□ -0.29
VCX3A-203ENST00000612369 PSENENQ9NZ42 101 aa13.25□□□□□ -0.29
VCX3A-203ENST00000612369 H3BMM0 161 aa13.24□□□□□ -0.29
VCX3A-203ENST00000612369 PLA2G10O15496 165 aa13.24□□□□□ -0.29
VCX3A-203ENST00000612369 LYRM1O43325 122 aa13.24□□□□□ -0.29
VCX3A-203ENST00000612369 PSMB3P49720 205 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms