RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 NUDT11Q96G61 164 aa13.79□□□□□ -0.2
NEK3-206ENST00000611833 EPDR1Q9UM22 224 aa13.79□□□□□ -0.2
NEK3-206ENST00000611833 RPH3ALQ9UNE2 315 aa13.79□□□□□ -0.2
NEK3-206ENST00000611833 PTPRQQ9UMZ3 2332 aa13.78□□□□□ -0.2
NEK3-206ENST00000611833 KIR2DL5BA0A0G2JN68 375 aa13.78□□□□□ -0.2
NEK3-206ENST00000611833 KIR2DL5BA0A0G2JPC4 375 aa13.78□□□□□ -0.2
NEK3-206ENST00000611833 CORTO00230 105 aa13.78□□□□□ -0.2
NEK3-206ENST00000611833 HYPMO75409 117 aa13.78□□□□□ -0.2
NEK3-206ENST00000611833 PVRIGQ6DKI7 326 aa13.78□□□□□ -0.2
NEK3-206ENST00000611833 PPP1R27Q86WC6 154 aa13.78□□□□□ -0.2
NEK3-206ENST00000611833 KIR2DL5AQ8N109 375 aa13.78□□□□□ -0.2
NEK3-206ENST00000611833 TMEM116Q8NCL8 245 aa13.78□□□□□ -0.2
NEK3-206ENST00000611833 GRAMD2BQ96HH9 432 aa13.78□□□□□ -0.2
NEK3-206ENST00000611833 RELNP78509 3460 aa13.78□□□□□ -0.2
NEK3-206ENST00000611833 PPIAL4CA0A0B4J2A2 164 aa13.78□□□□□ -0.2
NEK3-206ENST00000611833 BMPR1BO00238 502 aa13.78□□□□□ -0.2
NEK3-206ENST00000611833 SIAH2O43255 324 aa13.78□□□□□ -0.2
NEK3-206ENST00000611833 NBEAP1P0C6P0 100 aa13.78□□□□□ -0.2
NEK3-206ENST00000611833 PPIAL4GP0DN37 164 aa13.78□□□□□ -0.2
NEK3-206ENST00000611833 CDKN1AP38936 164 aa13.78□□□□□ -0.2
NEK3-206ENST00000611833 TMEM183BQ1AE95 376 aa13.78□□□□□ -0.2
NEK3-206ENST00000611833 MUC15Q8N387 334 aa13.78□□□□□ -0.2
NEK3-206ENST00000611833 RPEQ96AT9 228 aa13.78□□□□□ -0.2
NEK3-206ENST00000611833 CBLN4Q9NTU7 201 aa13.78□□□□□ -0.2
NEK3-206ENST00000611833 FAM90A27PA6NNH2 459 aa13.77□□□□□ -0.21
NEK3-206ENST00000611833 GPX1P07203 203 aa13.77□□□□□ -0.21
NEK3-206ENST00000611833 MYCNOSP40205 109 aa13.77□□□□□ -0.21
NEK3-206ENST00000611833 TPTE2P1Q5T6R2 138 aa13.77□□□□□ -0.21
NEK3-206ENST00000611833 VN1R17PQ8TDU5 208 aa13.77□□□□□ -0.21
NEK3-206ENST00000611833 SGK494Q96LW2 274 aa13.77□□□□□ -0.21
NEK3-206ENST00000611833 TMEM68Q96MH6 324 aa13.77□□□□□ -0.21
NEK3-206ENST00000611833 CHRDL1Q9BU40 450 aa13.77□□□□□ -0.21
NEK3-206ENST00000611833 FBXL15Q9H469 300 aa13.76□□□□□ -0.21
NEK3-206ENST00000611833 F11RQ9Y624 299 aaKnown RBP13.76□□□□□ -0.21
NEK3-206ENST00000611833 RNF224P0DH78 156 aa13.76□□□□□ -0.21
NEK3-206ENST00000611833 HIST1H1EP10412 219 aaKnown RBP13.76□□□□□ -0.21
NEK3-206ENST00000611833 AMTP48728 403 aa13.76□□□□□ -0.21
NEK3-206ENST00000611833 PLGLAQ15195 96 aa13.76□□□□□ -0.21
NEK3-206ENST00000611833 MBD6Q96DN6 1003 aa13.76□□□□□ -0.21
NEK3-206ENST00000611833 KCNS1Q96KK3 526 aa13.76□□□□□ -0.21
NEK3-206ENST00000611833 ZNF586Q9NXT0 402 aa13.76□□□□□ -0.21
NEK3-206ENST00000611833 MALRD1Q5VYJ5 2156 aa13.76□□□□□ -0.21
NEK3-206ENST00000611833 KRTDAPP60985 99 aa13.75□□□□□ -0.21
NEK3-206ENST00000611833 NUP35Q8NFH5 326 aa13.75□□□□□ -0.21
NEK3-206ENST00000611833 RCHY1Q96PM5 261 aa13.75□□□□□ -0.21
NEK3-206ENST00000611833 GSX1Q9H4S2 264 aaPredicted RBP13.75□□□□□ -0.21
NEK3-206ENST00000611833 TBL2Q9Y4P3 447 aaKnown RBP13.75□□□□□ -0.21
NEK3-206ENST00000611833 ZZEF1O43149 2961 aa13.75□□□□□ -0.21
NEK3-206ENST00000611833 PMCHP20382 165 aa13.75□□□□□ -0.21
NEK3-206ENST00000611833 TDRG1Q3Y452 100 aa13.75□□□□□ -0.21
NEK3-206ENST00000611833 LEMD1Q68G75 181 aa13.75□□□□□ -0.21
NEK3-206ENST00000611833 RASL11AQ6T310 242 aa13.75□□□□□ -0.21
NEK3-206ENST00000611833 TEX43Q6ZNM6 134 aa13.75□□□□□ -0.21
NEK3-206ENST00000611833 C8orf46Q8TAG6 207 aa13.75□□□□□ -0.21
NEK3-206ENST00000611833 A0A1W2PS18 150 aa13.74□□□□□ -0.21
NEK3-206ENST00000611833 TEX22C9J3V5 150 aa13.74□□□□□ -0.21
NEK3-206ENST00000611833 EREGO14944 169 aa13.74□□□□□ -0.21
NEK3-206ENST00000611833 SLAQ13239 276 aa13.74□□□□□ -0.21
NEK3-206ENST00000611833 WIPF2Q8TF74 440 aaPredicted RBP13.74□□□□□ -0.21
NEK3-206ENST00000611833 SRSF12Q8WXF0 261 aaKnown RBP13.74□□□□□ -0.21
NEK3-206ENST00000611833 FBXL7Q9UJT9 491 aa13.74□□□□□ -0.21
NEK3-206ENST00000611833 LRBAP50851 2863 aa13.74□□□□□ -0.21
NEK3-206ENST00000611833 H3BTX0 84 aa13.74□□□□□ -0.21
NEK3-206ENST00000611833 TSKUQ8WUA8 353 aa13.74□□□□□ -0.21
NEK3-206ENST00000611833 GPR82Q96P67 336 aa13.74□□□□□ -0.21
NEK3-206ENST00000611833 VAMP8Q9BV40 100 aa13.74□□□□□ -0.21
NEK3-206ENST00000611833 NRN1Q9NPD7 142 aa13.74□□□□□ -0.21
NEK3-206ENST00000611833 ONECUT1Q9UBC0 465 aa13.74□□□□□ -0.21
NEK3-206ENST00000611833 HIGD1AQ9Y241 93 aa13.74□□□□□ -0.21
NEK3-206ENST00000611833 DCHS2Q6V1P9 2916 aa13.74□□□□□ -0.21
NEK3-206ENST00000611833 GP9P14770 177 aa13.73□□□□□ -0.21
NEK3-206ENST00000611833 CA7P43166 264 aa13.73□□□□□ -0.21
NEK3-206ENST00000611833 SSTP61278 116 aa13.73□□□□□ -0.21
NEK3-206ENST00000611833 LYZP61626 148 aa13.73□□□□□ -0.21
NEK3-206ENST00000611833 ZNF705AQ6ZN79 300 aaPredicted RBP13.73□□□□□ -0.21
NEK3-206ENST00000611833 C5orf17Q8NAS9 161 aa13.73□□□□□ -0.21
NEK3-206ENST00000611833 ATG101Q9BSB4 218 aa13.73□□□□□ -0.21
NEK3-206ENST00000611833 PAM16Q9Y3D7 125 aa13.73□□□□□ -0.21
NEK3-206ENST00000611833 KLF12Q9Y4X4 402 aa13.73□□□□□ -0.21
NEK3-206ENST00000611833 HIGD1CA8MV81 97 aa13.73□□□□□ -0.21
NEK3-206ENST00000611833 RBP4P02753 201 aa13.73□□□□□ -0.21
NEK3-206ENST00000611833 FBXL19-AS1Q494R0 122 aa13.73□□□□□ -0.21
NEK3-206ENST00000611833 ZNF672Q499Z4 452 aaPredicted RBP13.73□□□□□ -0.21
NEK3-206ENST00000611833 OR8B3Q8NGG8 313 aa13.73□□□□□ -0.21
NEK3-206ENST00000611833 OR8B2Q96RD0 313 aa13.73□□□□□ -0.21
NEK3-206ENST00000611833 NEU1Q99519 415 aa13.73□□□□□ -0.21
NEK3-206ENST00000611833 C7orf69Q9H7B7 122 aa13.73□□□□□ -0.21
NEK3-206ENST00000611833 M0R143 59 aa13.72□□□□□ -0.21
NEK3-206ENST00000611833 CNIH1O95406 144 aa13.72□□□□□ -0.21
NEK3-206ENST00000611833 PSG1P11464 419 aa13.72□□□□□ -0.21
NEK3-206ENST00000611833 PLP1P60201 277 aa13.72□□□□□ -0.21
NEK3-206ENST00000611833 CDSNQ15517 529 aa13.72□□□□□ -0.21
NEK3-206ENST00000611833 SMIM12Q96EX1 92 aa13.72□□□□□ -0.21
NEK3-206ENST00000611833 SNHG12Q9BXW3 62 aa13.72□□□□□ -0.21
NEK3-206ENST00000611833 Q9H3A6 140 aa13.72□□□□□ -0.21
NEK3-206ENST00000611833 TACC2O95359 2948 aa13.72□□□□□ -0.21
NEK3-206ENST00000611833 ZNF324O75467 553 aaPredicted RBP13.72□□□□□ -0.21
NEK3-206ENST00000611833 PAX2Q02962 417 aa13.72□□□□□ -0.21
NEK3-206ENST00000611833 FMC1Q96HJ9 113 aa13.72□□□□□ -0.21
NEK3-206ENST00000611833 DIRC3C9JPN6 131 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms