RNA–Protein interactions for RNA: ENST00000610470.4

PRKN-208, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene PRKN, Length 531 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-208ENST00000610470 SRRQ9GZT4 340 aa12.69□□□□□ -0.38
PRKN-208ENST00000610470 SLC25A21Q9BQT8 299 aaPredicted RBP12.68□□□□□ -0.38
PRKN-208ENST00000610470 KNCNA6PVL3 124 aa12.67□□□□□ -0.38
PRKN-208ENST00000610470 PSG1P11464 419 aa12.67□□□□□ -0.38
PRKN-208ENST00000610470 GPX4P36969 197 aaPredicted RBP12.67□□□□□ -0.38
PRKN-208ENST00000610470 NUP62P37198 522 aaPredicted RBP12.67□□□□□ -0.38
PRKN-208ENST00000610470 OR51G1Q8NGK1 321 aa12.67□□□□□ -0.38
PRKN-208ENST00000610470 SLC35E1Q96K37 410 aa12.67□□□□□ -0.38
PRKN-208ENST00000610470 SEPSECSQ9HD40 501 aaKnown RBP12.67□□□□□ -0.38
PRKN-208ENST00000610470 PFDN2Q9UHV9 154 aa12.67□□□□□ -0.38
PRKN-208ENST00000610470 BUB3O43684 328 aa12.66□□□□□ -0.38
PRKN-208ENST00000610470 VAMP1P23763 118 aa12.66□□□□□ -0.38
PRKN-208ENST00000610470 NANOS2P60321 138 aaKnown RBP12.66□□□□□ -0.38
PRKN-208ENST00000610470 SNRPD3P62318 126 aaKnown RBP12.66□□□□□ -0.38
PRKN-208ENST00000610470 BAK1Q16611 211 aa12.66□□□□□ -0.38
PRKN-208ENST00000610470 CNPY1Q3B7I2 92 aa12.66□□□□□ -0.38
PRKN-208ENST00000610470 PSMG4Q5JS54 123 aa12.66□□□□□ -0.38
PRKN-208ENST00000610470 ACTL10Q5JWF8 245 aa12.66□□□□□ -0.38
PRKN-208ENST00000610470 SIGLEC15Q6ZMC9 328 aa12.66□□□□□ -0.38
PRKN-208ENST00000610470 LRTM2Q8N967 370 aa12.66□□□□□ -0.38
PRKN-208ENST00000610470 RNF125Q96EQ8 232 aa12.66□□□□□ -0.38
PRKN-208ENST00000610470 NRN1Q9NPD7 142 aa12.66□□□□□ -0.38
PRKN-208ENST00000610470 ZFP92A6NM28 416 aa12.65□□□□□ -0.38
PRKN-208ENST00000610470 PITX3O75364 302 aa12.65□□□□□ -0.38
PRKN-208ENST00000610470 FABP1P07148 127 aa12.65□□□□□ -0.38
PRKN-208ENST00000610470 SLC25A6P12236 298 aa12.65□□□□□ -0.38
PRKN-208ENST00000610470 RAB11AP62491 216 aa12.65□□□□□ -0.38
PRKN-208ENST00000610470 GAMTQ14353 236 aa12.65□□□□□ -0.38
PRKN-208ENST00000610470 OR8G2PQ6IF36 304 aa12.65□□□□□ -0.38
PRKN-208ENST00000610470 RAB40CQ96S21 281 aa12.65□□□□□ -0.38
PRKN-208ENST00000610470 SDHCQ99643 169 aaPredicted RBP12.65□□□□□ -0.38
PRKN-208ENST00000610470 FBXL17Q9UF56 701 aa12.65□□□□□ -0.38
PRKN-208ENST00000610470 FAM90A26D6RGX4 464 aa12.64□□□□□ -0.39
PRKN-208ENST00000610470 DEFB4AO15263 64 aa12.64□□□□□ -0.39
PRKN-208ENST00000610470 MED6O75586 246 aa12.64□□□□□ -0.39
PRKN-208ENST00000610470 SFT2D2O95562 160 aa12.64□□□□□ -0.39
PRKN-208ENST00000610470 GIG44P09565 113 aaPredicted RBP12.64□□□□□ -0.39
PRKN-208ENST00000610470 PBDC1Q9BVG4 233 aa12.64□□□□□ -0.39
PRKN-208ENST00000610470 TMED3Q9Y3Q3 217 aa12.64□□□□□ -0.39
PRKN-208ENST00000610470 KMT2AQ03164 3969 aa12.63□□□□□ -0.39
PRKN-208ENST00000610470 IAPPP10997 89 aa12.63□□□□□ -0.39
PRKN-208ENST00000610470 MIFP14174 115 aa12.63□□□□□ -0.39
PRKN-208ENST00000610470 C4BPBP20851 252 aa12.63□□□□□ -0.39
PRKN-208ENST00000610470 INPP1P49441 399 aa12.63□□□□□ -0.39
PRKN-208ENST00000610470 RPP30P78346 268 aaKnown RBP12.63□□□□□ -0.39
PRKN-208ENST00000610470 TRIQKQ629K1 86 aa12.63□□□□□ -0.39
PRKN-208ENST00000610470 Q8NAQ8 132 aa12.63□□□□□ -0.39
PRKN-208ENST00000610470 CIB3Q96Q77 187 aaPredicted RBP12.63□□□□□ -0.39
PRKN-208ENST00000610470 AGRNO00468 2067 aa12.62□□□□□ -0.39
PRKN-208ENST00000610470 IGKV1D-37A0A075B6S9 117 aa12.62□□□□□ -0.39
PRKN-208ENST00000610470 LINC00854A0A1B0GVQ3 168 aa12.62□□□□□ -0.39
PRKN-208ENST00000610470 ZNF705EA8MWA4 302 aaPredicted RBP12.62□□□□□ -0.39
PRKN-208ENST00000610470 NUTF2P61970 127 aaKnown RBP12.62□□□□□ -0.39
PRKN-208ENST00000610470 ZNF90Q03938 601 aa12.62□□□□□ -0.39
PRKN-208ENST00000610470 PPP1R1AQ13522 171 aa12.62□□□□□ -0.39
PRKN-208ENST00000610470 CENPSQ8N2Z9 138 aa12.62□□□□□ -0.39
PRKN-208ENST00000610470 PAIP2BQ9ULR5 123 aaKnown RBP12.62□□□□□ -0.39
PRKN-208ENST00000610470 IGHV4-28A0A0C4DH34 117 aa12.61□□□□□ -0.39
PRKN-208ENST00000610470 SNRPGP15A8MWD9 76 aa12.61□□□□□ -0.39
PRKN-208ENST00000610470 UBE2MP61081 183 aaKnown RBP12.61□□□□□ -0.39
PRKN-208ENST00000610470 C2CD4CQ8TF44 421 aa12.61□□□□□ -0.39
PRKN-208ENST00000610470 C1QTNF4Q9BXJ3 329 aa12.61□□□□□ -0.39
PRKN-208ENST00000610470 HRH4Q9H3N8 390 aa12.61□□□□□ -0.39
PRKN-208ENST00000610470 TBC1D24Q9ULP9 559 aa12.61□□□□□ -0.39
PRKN-208ENST00000610470 SYNGR2O43760 224 aa12.6□□□□□ -0.39
PRKN-208ENST00000610470 HOXB5P09067 269 aa12.6□□□□□ -0.39
PRKN-208ENST00000610470 IL7P13232 177 aa12.6□□□□□ -0.39
PRKN-208ENST00000610470 LYZP61626 148 aa12.6□□□□□ -0.39
PRKN-208ENST00000610470 C1orf194Q5T5A4 169 aa12.6□□□□□ -0.39
PRKN-208ENST00000610470 LGALS9CQ6DKI2 356 aa12.6□□□□□ -0.39
PRKN-208ENST00000610470 TRGV9Q99603 122 aa12.6□□□□□ -0.39
PRKN-208ENST00000610470 BATF3Q9NR55 127 aa12.6□□□□□ -0.39
PRKN-208ENST00000610470 CLEC5AQ9NY25 188 aa12.6□□□□□ -0.39
PRKN-208ENST00000610470 NAP1L6A6NFF2 107 aa12.59□□□□□ -0.39
PRKN-208ENST00000610470 C11orf94C9JXX5 98 aa12.59□□□□□ -0.39
PRKN-208ENST00000610470 H3BMM0 161 aa12.59□□□□□ -0.39
PRKN-208ENST00000610470 CFDP00746 253 aaPredicted RBP12.59□□□□□ -0.39
PRKN-208ENST00000610470 RBMY1A1P0DJD3 496 aaKnown RBP12.59□□□□□ -0.39
PRKN-208ENST00000610470 RBMY1CP0DJD4 496 aa12.59□□□□□ -0.39
PRKN-208ENST00000610470 ID1P41134 155 aa12.59□□□□□ -0.39
PRKN-208ENST00000610470 NKX2-1P43699 371 aaPredicted RBP12.59□□□□□ -0.39
PRKN-208ENST00000610470 TCTAP57738 103 aa12.59□□□□□ -0.39
PRKN-208ENST00000610470 RBMY1FQ15415 496 aaKnown RBP12.59□□□□□ -0.39
PRKN-208ENST00000610470 THAP8Q8NA92 274 aa12.59□□□□□ -0.39
PRKN-208ENST00000610470 CSNK1G2-AS1Q8NCQ2 148 aa12.59□□□□□ -0.39
PRKN-208ENST00000610470 PPP1R14BQ96C90 147 aa12.59□□□□□ -0.39
PRKN-208ENST00000610470 MAGT1Q9H0U3 335 aa12.59□□□□□ -0.39
PRKN-208ENST00000610470 X6R8D5 127 aa12.59□□□□□ -0.39
PRKN-208ENST00000610470 WRBO00258 174 aa12.58□□□□□ -0.4
PRKN-208ENST00000610470 HLA-DRB4P13762 266 aa12.58□□□□□ -0.4
PRKN-208ENST00000610470 OR2F1Q13607 317 aa12.58□□□□□ -0.4
PRKN-208ENST00000610470 GGNBP1Q5YKI7 109 aa12.58□□□□□ -0.4
PRKN-208ENST00000610470 HLA-DRB4X5D2U9 266 aa12.58□□□□□ -0.4
PRKN-208ENST00000610470 LINC00299Q6ZSB3 139 aa12.57□□□□□ -0.4
PRKN-208ENST00000610470 LINC00052Q96N35 136 aa12.57□□□□□ -0.4
PRKN-208ENST00000610470 PTTG2Q9NZH5 202 aa12.57□□□□□ -0.4
PRKN-208ENST00000610470 IGKV1OR2-108A0A075B7D4 117 aa12.56□□□□□ -0.4
PRKN-208ENST00000610470 C9orf170A2RU37 121 aa12.56□□□□□ -0.4
PRKN-208ENST00000610470 CENPXA8MT69 81 aa12.56□□□□□ -0.4
PRKN-208ENST00000610470 NDUFB6O95139 128 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms