RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 TRIQKQ629K1 86 aa13.28□□□□□ -0.28
CCDC12-208ENST00000603885 ZFP92A6NM28 416 aa13.27□□□□□ -0.29
CCDC12-208ENST00000603885 IAPPP10997 89 aa13.27□□□□□ -0.29
CCDC12-208ENST00000603885 UBE2MP61081 183 aaKnown RBP13.27□□□□□ -0.29
CCDC12-208ENST00000603885 GAMTQ14353 236 aa13.27□□□□□ -0.29
CCDC12-208ENST00000603885 OR51G1Q8NGK1 321 aa13.27□□□□□ -0.29
CCDC12-208ENST00000603885 OR11H2Q8NH07 326 aa13.27□□□□□ -0.29
CCDC12-208ENST00000603885 RNF125Q96EQ8 232 aa13.27□□□□□ -0.29
CCDC12-208ENST00000603885 NAP1L6A6NFF2 107 aa13.26□□□□□ -0.29
CCDC12-208ENST00000603885 BUB3O43684 328 aa13.26□□□□□ -0.29
CCDC12-208ENST00000603885 FABP1P07148 127 aa13.26□□□□□ -0.29
CCDC12-208ENST00000603885 HOXB5P09067 269 aa13.26□□□□□ -0.29
CCDC12-208ENST00000603885 NUP62P37198 522 aaPredicted RBP13.26□□□□□ -0.29
CCDC12-208ENST00000603885 SIGLEC15Q6ZMC9 328 aa13.26□□□□□ -0.29
CCDC12-208ENST00000603885 TRPT1Q86TN4 253 aaKnown RBP13.26□□□□□ -0.29
CCDC12-208ENST00000603885 CIB3Q96Q77 187 aaPredicted RBP13.26□□□□□ -0.29
CCDC12-208ENST00000603885 PBDC1Q9BVG4 233 aa13.26□□□□□ -0.29
CCDC12-208ENST00000603885 PFDN2Q9UHV9 154 aa13.26□□□□□ -0.29
CCDC12-208ENST00000603885 PAIP2BQ9ULR5 123 aaKnown RBP13.26□□□□□ -0.29
CCDC12-208ENST00000603885 RPP30P78346 268 aaKnown RBP13.25□□□□□ -0.29
CCDC12-208ENST00000603885 BAK1Q16611 211 aa13.25□□□□□ -0.29
CCDC12-208ENST00000603885 CEMP1Q6PRD7 247 aaPredicted RBP13.25□□□□□ -0.29
CCDC12-208ENST00000603885 C11orf68Q9H3H3 251 aaKnown RBP13.25□□□□□ -0.29
CCDC12-208ENST00000603885 IGKV1D-37A0A075B6S9 117 aa13.24□□□□□ -0.29
CCDC12-208ENST00000603885 KNCNA6PVL3 124 aa13.24□□□□□ -0.29
CCDC12-208ENST00000603885 SYNGR2O43760 224 aa13.24□□□□□ -0.29
CCDC12-208ENST00000603885 NDUFB6O95139 128 aa13.24□□□□□ -0.29
CCDC12-208ENST00000603885 SPP1P10451 314 aa13.24□□□□□ -0.29
CCDC12-208ENST00000603885 SNRPD3P62318 126 aaKnown RBP13.24□□□□□ -0.29
CCDC12-208ENST00000603885 ZNF90Q03938 601 aa13.24□□□□□ -0.29
CCDC12-208ENST00000603885 TMEM41BQ5BJD5 291 aa13.24□□□□□ -0.29
CCDC12-208ENST00000603885 PSMG4Q5JS54 123 aa13.24□□□□□ -0.29
CCDC12-208ENST00000603885 ACTL10Q5JWF8 245 aa13.24□□□□□ -0.29
CCDC12-208ENST00000603885 GGNBP1Q5YKI7 109 aa13.24□□□□□ -0.29
CCDC12-208ENST00000603885 OR8G2PQ6IF36 304 aa13.24□□□□□ -0.29
CCDC12-208ENST00000603885 MORN3Q6PF18 240 aaPredicted RBP13.24□□□□□ -0.29
CCDC12-208ENST00000603885 MAGT1Q9H0U3 335 aa13.24□□□□□ -0.29
CCDC12-208ENST00000603885 NRN1Q9NPD7 142 aa13.24□□□□□ -0.29
CCDC12-208ENST00000603885 AGRNO00468 2067 aa13.24□□□□□ -0.29
CCDC12-208ENST00000603885 HYDINQ4G0P3 5121 aa13.24□□□□□ -0.29
CCDC12-208ENST00000603885 C9orf170A2RU37 121 aa13.23□□□□□ -0.29
CCDC12-208ENST00000603885 SEPSECSQ9HD40 501 aaKnown RBP13.23□□□□□ -0.29
CCDC12-208ENST00000603885 KLK5Q9Y337 293 aaPredicted RBP13.23□□□□□ -0.29
CCDC12-208ENST00000603885 LINC00854A0A1B0GVQ3 168 aa13.22□□□□□ -0.29
CCDC12-208ENST00000603885 CENPXA8MT69 81 aa13.22□□□□□ -0.29
CCDC12-208ENST00000603885 SNRPGP15A8MWD9 76 aa13.22□□□□□ -0.29
CCDC12-208ENST00000603885 WRBO00258 174 aa13.22□□□□□ -0.29
CCDC12-208ENST00000603885 LYZP61626 148 aa13.22□□□□□ -0.29
CCDC12-208ENST00000603885 TRGV9Q99603 122 aa13.22□□□□□ -0.29
CCDC12-208ENST00000603885 GIG44P09565 113 aaPredicted RBP13.21□□□□□ -0.29
CCDC12-208ENST00000603885 COQ8AQ8NI60 647 aa13.21□□□□□ -0.29
CCDC12-208ENST00000603885 C11orf45Q8TAV5 145 aa13.21□□□□□ -0.29
CCDC12-208ENST00000603885 PHLDA1Q8WV24 401 aaPredicted RBP13.21□□□□□ -0.29
CCDC12-208ENST00000603885 LINC00476Q8WZB0 136 aa13.21□□□□□ -0.29
CCDC12-208ENST00000603885 RAB40CQ96S21 281 aa13.21□□□□□ -0.29
CCDC12-208ENST00000603885 SDHCQ99643 169 aaPredicted RBP13.21□□□□□ -0.29
CCDC12-208ENST00000603885 MFFQ9GZY8 342 aa13.21□□□□□ -0.29
CCDC12-208ENST00000603885 FLVCR2Q9UPI3 526 aa13.21□□□□□ -0.29
CCDC12-208ENST00000603885 ADAP1O75689 374 aa13.2□□□□□ -0.3
CCDC12-208ENST00000603885 OR4E1P0C645 316 aa13.2□□□□□ -0.3
CCDC12-208ENST00000603885 C4BPBP20851 252 aa13.2□□□□□ -0.3
CCDC12-208ENST00000603885 OR2F1Q13607 317 aa13.2□□□□□ -0.3
CCDC12-208ENST00000603885 SPANXN5Q5MJ07 72 aa13.2□□□□□ -0.3
CCDC12-208ENST00000603885 THAP8Q8NA92 274 aa13.2□□□□□ -0.3
CCDC12-208ENST00000603885 C7orf50Q9BRJ6 194 aaKnown RBP13.2□□□□□ -0.3
CCDC12-208ENST00000603885 FBXL17Q9UF56 701 aa13.2□□□□□ -0.3
CCDC12-208ENST00000603885 IGKV1OR2-108A0A075B7D4 117 aa13.19□□□□□ -0.3
CCDC12-208ENST00000603885 PRSS46E5RG02 174 aa13.19□□□□□ -0.3
CCDC12-208ENST00000603885 CFDP00746 253 aaPredicted RBP13.19□□□□□ -0.3
CCDC12-208ENST00000603885 IFNA21P01568 189 aa13.19□□□□□ -0.3
CCDC12-208ENST00000603885 IL7P13232 177 aa13.19□□□□□ -0.3
CCDC12-208ENST00000603885 C1orf194Q5T5A4 169 aa13.19□□□□□ -0.3
CCDC12-208ENST00000603885 PPP1R14BQ96C90 147 aa13.19□□□□□ -0.3
CCDC12-208ENST00000603885 STRAPQ9Y3F4 350 aaKnown RBP13.19□□□□□ -0.3
CCDC12-208ENST00000603885 H3BP45 60 aa13.18□□□□□ -0.3
CCDC12-208ENST00000603885 DEFB4AO15263 64 aa13.18□□□□□ -0.3
CCDC12-208ENST00000603885 BTCP35070 178 aa13.18□□□□□ -0.3
CCDC12-208ENST00000603885 NANOS2P60321 138 aaKnown RBP13.18□□□□□ -0.3
CCDC12-208ENST00000603885 ID3Q02535 119 aa13.18□□□□□ -0.3
CCDC12-208ENST00000603885 C4orf46Q504U0 113 aa13.18□□□□□ -0.3
CCDC12-208ENST00000603885 NDUFA13Q9P0J0 144 aa13.18□□□□□ -0.3
CCDC12-208ENST00000603885 LY6G6CO95867 125 aa13.17□□□□□ -0.3
CCDC12-208ENST00000603885 MIFP14174 115 aa13.17□□□□□ -0.3
CCDC12-208ENST00000603885 ANXA7P20073 488 aaKnown RBP13.17□□□□□ -0.3
CCDC12-208ENST00000603885 NKX2-1P43699 371 aaPredicted RBP13.17□□□□□ -0.3
CCDC12-208ENST00000603885 NUTF2P61970 127 aaKnown RBP13.17□□□□□ -0.3
CCDC12-208ENST00000603885 POLR2GP62487 172 aaKnown RBP eCLIP13.17□□□□□ -0.3
CCDC12-208ENST00000603885 AKR1C1Q04828 323 aa13.17□□□□□ -0.3
CCDC12-208ENST00000603885 Q8NAQ8 132 aa13.17□□□□□ -0.3
CCDC12-208ENST00000603885 ZNF705EA8MWA4 302 aaPredicted RBP13.16□□□□□ -0.3
CCDC12-208ENST00000603885 H3BMM0 161 aa13.16□□□□□ -0.3
CCDC12-208ENST00000603885 ID1P41134 155 aa13.16□□□□□ -0.3
CCDC12-208ENST00000603885 CNPY1Q3B7I2 92 aa13.16□□□□□ -0.3
CCDC12-208ENST00000603885 ACOT7LQ6ZUV0 252 aa13.16□□□□□ -0.3
CCDC12-208ENST00000603885 OR8I2Q8N0Y5 310 aa13.16□□□□□ -0.3
CCDC12-208ENST00000603885 BPIFCQ8NFQ6 507 aa13.16□□□□□ -0.3
CCDC12-208ENST00000603885 OR4D5Q8NGN0 318 aa13.16□□□□□ -0.3
CCDC12-208ENST00000603885 C1QTNF4Q9BXJ3 329 aa13.16□□□□□ -0.3
CCDC12-208ENST00000603885 CLEC5AQ9NY25 188 aa13.16□□□□□ -0.3
CCDC12-208ENST00000603885 IGHV4-28A0A0C4DH34 117 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms