RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 C1QTNF4Q9BXJ3 329 aa12.9□□□□□ -0.34
CHMP2A-208ENST00000601220 HSPB7Q9UBY9 170 aa12.9□□□□□ -0.34
CHMP2A-208ENST00000601220 HLA-DRB4X5D2U9 266 aa12.9□□□□□ -0.34
CHMP2A-208ENST00000601220 IGKV1D-37A0A075B6S9 117 aa12.89□□□□□ -0.35
CHMP2A-208ENST00000601220 AKAIN1P0CW23 69 aa12.89□□□□□ -0.35
CHMP2A-208ENST00000601220 SULT1A3P0DMM9 295 aa12.89□□□□□ -0.35
CHMP2A-208ENST00000601220 SULT1A4P0DMN0 295 aa12.89□□□□□ -0.35
CHMP2A-208ENST00000601220 NKX2-1P43699 371 aaPredicted RBP12.89□□□□□ -0.35
CHMP2A-208ENST00000601220 DEFB1P60022 68 aa12.89□□□□□ -0.35
CHMP2A-208ENST00000601220 NUTF2P61970 127 aaKnown RBP12.89□□□□□ -0.35
CHMP2A-208ENST00000601220 GDF5OSQ5U4N7 250 aa12.89□□□□□ -0.35
CHMP2A-208ENST00000601220 NOXA1Q86UR1 476 aa12.89□□□□□ -0.35
CHMP2A-208ENST00000601220 OR51G1Q8NGK1 321 aa12.89□□□□□ -0.35
CHMP2A-208ENST00000601220 NEU1Q99519 415 aa12.89□□□□□ -0.35
CHMP2A-208ENST00000601220 U3KQ87 197 aa12.89□□□□□ -0.35
CHMP2A-208ENST00000601220 DNAH11Q96DT5 4516 aa12.89□□□□□ -0.35
CHMP2A-208ENST00000601220 DYNC1H1Q14204 4646 aaKnown RBP12.88□□□□□ -0.35
CHMP2A-208ENST00000601220 PKHD1P08F94 4074 aa12.88□□□□□ -0.35
CHMP2A-208ENST00000601220 ZNF705FA8MVS1 300 aaPredicted RBP12.88□□□□□ -0.35
CHMP2A-208ENST00000601220 RGS5O15539 181 aa12.88□□□□□ -0.35
CHMP2A-208ENST00000601220 GSTZ1O43708 216 aaPredicted RBP12.88□□□□□ -0.35
CHMP2A-208ENST00000601220 ZNF705DP0CH99 300 aaPredicted RBP12.88□□□□□ -0.35
CHMP2A-208ENST00000601220 ZNF705BP0CI00 300 aaPredicted RBP12.88□□□□□ -0.35
CHMP2A-208ENST00000601220 ALDH3B2P48448 385 aa12.88□□□□□ -0.35
CHMP2A-208ENST00000601220 SUPT4H1P63272 117 aaKnown RBP12.88□□□□□ -0.35
CHMP2A-208ENST00000601220 RNF125Q96EQ8 232 aa12.88□□□□□ -0.35
CHMP2A-208ENST00000601220 PRRT1Q99946 306 aa12.88□□□□□ -0.35
CHMP2A-208ENST00000601220 WDR12Q9GZL7 423 aaKnown RBP12.88□□□□□ -0.35
CHMP2A-208ENST00000601220 RBKSQ9H477 322 aa12.88□□□□□ -0.35
CHMP2A-208ENST00000601220 CACFD1Q9UGQ2 172 aa12.88□□□□□ -0.35
CHMP2A-208ENST00000601220 ANKRD20A5PA0PJZ0 165 aa12.87□□□□□ -0.35
CHMP2A-208ENST00000601220 SOCS3O14543 225 aa12.87□□□□□ -0.35
CHMP2A-208ENST00000601220 IFNA10P01566 189 aa12.87□□□□□ -0.35
CHMP2A-208ENST00000601220 CCR6P51684 374 aa12.87□□□□□ -0.35
CHMP2A-208ENST00000601220 KLF9Q13886 244 aaPredicted RBP12.87□□□□□ -0.35
CHMP2A-208ENST00000601220 LINC00336Q6ZUF6 198 aa12.87□□□□□ -0.35
CHMP2A-208ENST00000601220 LYZL2Q7Z4W2 148 aa12.87□□□□□ -0.35
CHMP2A-208ENST00000601220 LGI3Q8N145 548 aa12.87□□□□□ -0.35
CHMP2A-208ENST00000601220 POM121L12Q8N7R1 296 aa12.87□□□□□ -0.35
CHMP2A-208ENST00000601220 DTD1Q8TEA8 209 aa12.87□□□□□ -0.35
CHMP2A-208ENST00000601220 PKD1P98161 4303 aa12.86□□□□□ -0.35
CHMP2A-208ENST00000601220 A0A0B4J2A0 478 aa12.86□□□□□ -0.35
CHMP2A-208ENST00000601220 GPX4P36969 197 aaPredicted RBP12.86□□□□□ -0.35
CHMP2A-208ENST00000601220 ZNF90Q03938 601 aa12.86□□□□□ -0.35
CHMP2A-208ENST00000601220 GAMTQ14353 236 aa12.86□□□□□ -0.35
CHMP2A-208ENST00000601220 SMCO1Q147U7 214 aa12.86□□□□□ -0.35
CHMP2A-208ENST00000601220 OR8G2PQ6IF36 304 aa12.86□□□□□ -0.35
CHMP2A-208ENST00000601220 CLVS1Q8IUQ0 354 aaPredicted RBP12.86□□□□□ -0.35
CHMP2A-208ENST00000601220 CENPSQ8N2Z9 138 aa12.86□□□□□ -0.35
CHMP2A-208ENST00000601220 ZNF709Q8N972 641 aa12.86□□□□□ -0.35
CHMP2A-208ENST00000601220 CLUHP3Q96NS8 147 aa12.86□□□□□ -0.35
CHMP2A-208ENST00000601220 SAV1Q9H4B6 383 aaPredicted RBP12.86□□□□□ -0.35
CHMP2A-208ENST00000601220 SHPKQ9UHJ6 478 aa12.86□□□□□ -0.35
CHMP2A-208ENST00000601220 KCNIP3Q9Y2W7 256 aa12.86□□□□□ -0.35
CHMP2A-208ENST00000601220 RTL8CO15255 209 aa12.85□□□□□ -0.35
CHMP2A-208ENST00000601220 IL18Q14116 193 aa12.85□□□□□ -0.35
CHMP2A-208ENST00000601220 GSG1LQ6UXU4 331 aa12.85□□□□□ -0.35
CHMP2A-208ENST00000601220 DIRAS2Q96HU8 199 aa12.85□□□□□ -0.35
CHMP2A-208ENST00000601220 SOSTQ9BQB4 213 aa12.85□□□□□ -0.35
CHMP2A-208ENST00000601220 SMIM9A6NGZ8 99 aa12.84□□□□□ -0.35
CHMP2A-208ENST00000601220 P0DMU3 169 aa12.84□□□□□ -0.35
CHMP2A-208ENST00000601220 FAM231AP0DMU4 169 aa12.84□□□□□ -0.35
CHMP2A-208ENST00000601220 FAM231CP0DMU5 169 aa12.84□□□□□ -0.35
CHMP2A-208ENST00000601220 ATP5IP56385 69 aaPredicted RBP12.84□□□□□ -0.35
CHMP2A-208ENST00000601220 FOXI2Q6ZQN5 318 aa12.84□□□□□ -0.35
CHMP2A-208ENST00000601220 DYNC2LI1Q8TCX1 351 aa12.84□□□□□ -0.35
CHMP2A-208ENST00000601220 NDUFAF3Q9BU61 184 aa12.84□□□□□ -0.35
CHMP2A-208ENST00000601220 RABL2AQ9UBK7 228 aaPredicted RBP12.84□□□□□ -0.35
CHMP2A-208ENST00000601220 RABL2BQ9UNT1 228 aa12.84□□□□□ -0.35
CHMP2A-208ENST00000601220 PITX3O75364 302 aa12.83□□□□□ -0.36
CHMP2A-208ENST00000601220 SPART-AS1P0CW21 52 aa12.83□□□□□ -0.36
CHMP2A-208ENST00000601220 FXYD7P58549 80 aa12.83□□□□□ -0.36
CHMP2A-208ENST00000601220 ZNF79Q15937 498 aa12.83□□□□□ -0.36
CHMP2A-208ENST00000601220 C1orf194Q5T5A4 169 aa12.83□□□□□ -0.36
CHMP2A-208ENST00000601220 GPR141Q7Z602 305 aa12.83□□□□□ -0.36
CHMP2A-208ENST00000601220 C17orf77Q96MU5 243 aa12.83□□□□□ -0.36
CHMP2A-208ENST00000601220 PBDC1Q9BVG4 233 aa12.83□□□□□ -0.36
CHMP2A-208ENST00000601220 MRPS26Q9BYN8 205 aaKnown RBP12.83□□□□□ -0.36
CHMP2A-208ENST00000601220 ZFP92A6NM28 416 aa12.82□□□□□ -0.36
CHMP2A-208ENST00000601220 IGKV3-20P01619 116 aa12.82□□□□□ -0.36
CHMP2A-208ENST00000601220 AKR1C4P17516 323 aa12.82□□□□□ -0.36
CHMP2A-208ENST00000601220 NUP62P37198 522 aaPredicted RBP12.82□□□□□ -0.36
CHMP2A-208ENST00000601220 PSMB3P49720 205 aa12.82□□□□□ -0.36
CHMP2A-208ENST00000601220 LINC00052Q96N35 136 aa12.82□□□□□ -0.36
CHMP2A-208ENST00000601220 SCGB3A2Q96PL1 93 aa12.82□□□□□ -0.36
CHMP2A-208ENST00000601220 CCDC59Q9P031 241 aaKnown RBP12.82□□□□□ -0.36
CHMP2A-208ENST00000601220 DKK2Q9UBU2 259 aa12.82□□□□□ -0.36
CHMP2A-208ENST00000601220 SCP2D1Q9UJQ7 156 aa12.82□□□□□ -0.36
CHMP2A-208ENST00000601220 IGKV1OR2-108A0A075B7D4 117 aa12.81□□□□□ -0.36
CHMP2A-208ENST00000601220 TMEM189A5PLL7 270 aa12.81□□□□□ -0.36
CHMP2A-208ENST00000601220 EMP1P54849 157 aa12.81□□□□□ -0.36
CHMP2A-208ENST00000601220 PAX9P55771 341 aa12.81□□□□□ -0.36
CHMP2A-208ENST00000601220 C1orf158Q8N1D5 194 aa12.81□□□□□ -0.36
CHMP2A-208ENST00000601220 SLC35B3Q9H1N7 401 aa12.81□□□□□ -0.36
CHMP2A-208ENST00000601220 PLA2G2EQ9NZK7 142 aa12.81□□□□□ -0.36
CHMP2A-208ENST00000601220 RFNGQ9Y644 331 aa12.81□□□□□ -0.36
CHMP2A-208ENST00000601220 SNRPGP15A8MWD9 76 aa12.8□□□□□ -0.36
CHMP2A-208ENST00000601220 ID1P41134 155 aa12.8□□□□□ -0.36
CHMP2A-208ENST00000601220 LYZP61626 148 aa12.8□□□□□ -0.36
CHMP2A-208ENST00000601220 LGALS9BQ3B8N2 356 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms