RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 SLC16A13Q7RTY0 426 aa10.29□□□□□ -0.76
SCAF1-203ENST00000598359 OR1P1Q8NH06 330 aa10.29□□□□□ -0.76
SCAF1-203ENST00000598359 MRPL27Q9P0M9 148 aaKnown RBP10.29□□□□□ -0.76
SCAF1-203ENST00000598359 RCL1Q9Y2P8 373 aaKnown RBP10.29□□□□□ -0.76
SCAF1-203ENST00000598359 LSM5Q9Y4Y9 91 aaKnown RBP10.29□□□□□ -0.76
SCAF1-203ENST00000598359 A0A0G2JRQ6 117 aa10.28□□□□□ -0.76
SCAF1-203ENST00000598359 A0A1B0GU03 582 aa10.28□□□□□ -0.76
SCAF1-203ENST00000598359 I3L2K1 104 aa10.28□□□□□ -0.76
SCAF1-203ENST00000598359 MT-CO2P00403 227 aa10.28□□□□□ -0.76
SCAF1-203ENST00000598359 CTSGP08311 255 aa10.28□□□□□ -0.76
SCAF1-203ENST00000598359 P0C879 139 aa10.28□□□□□ -0.76
SCAF1-203ENST00000598359 NKX2-1P43699 371 aaPredicted RBP10.28□□□□□ -0.76
SCAF1-203ENST00000598359 AKR1C2P52895 323 aa10.28□□□□□ -0.76
SCAF1-203ENST00000598359 ELLP55199 621 aaPredicted RBP10.28□□□□□ -0.76
SCAF1-203ENST00000598359 ID3Q02535 119 aa10.28□□□□□ -0.76
SCAF1-203ENST00000598359 SPSB3Q6PJ21 355 aa10.28□□□□□ -0.76
SCAF1-203ENST00000598359 RBPMS2Q6ZRY4 209 aaKnown RBP10.28□□□□□ -0.76
SCAF1-203ENST00000598359 BAP18Q8IXM2 172 aa10.28□□□□□ -0.76
SCAF1-203ENST00000598359 LRRC20Q8TCA0 184 aa10.28□□□□□ -0.76
SCAF1-203ENST00000598359 MARC2Q969Z3 335 aa10.28□□□□□ -0.76
SCAF1-203ENST00000598359 PINX1Q96BK5 328 aaKnown RBP10.28□□□□□ -0.76
SCAF1-203ENST00000598359 IGHV3-49A0A0A0MS15 119 aa10.27□□□□□ -0.77
SCAF1-203ENST00000598359 NDUFA4O00483 81 aa10.27□□□□□ -0.77
SCAF1-203ENST00000598359 SCGB1D2O95969 90 aa10.27□□□□□ -0.77
SCAF1-203ENST00000598359 COMMD7Q86VX2 200 aa10.27□□□□□ -0.77
SCAF1-203ENST00000598359 OR1L6Q8NGR2 347 aa10.27□□□□□ -0.77
SCAF1-203ENST00000598359 DAZ1Q9NQZ3 744 aaKnown RBP10.27□□□□□ -0.77
SCAF1-203ENST00000598359 YIF1AO95070 293 aa10.26□□□□□ -0.77
SCAF1-203ENST00000598359 MFAP4P55083 255 aa10.26□□□□□ -0.77
SCAF1-203ENST00000598359 FAM219AQ8IW50 185 aa10.26□□□□□ -0.77
SCAF1-203ENST00000598359 EIF4E3Q8N5X7 224 aaKnown RBP10.26□□□□□ -0.77
SCAF1-203ENST00000598359 GPR146Q96CH1 333 aa10.26□□□□□ -0.77
SCAF1-203ENST00000598359 ARV1Q9H2C2 271 aa10.26□□□□□ -0.77
SCAF1-203ENST00000598359 FBXL17Q9UF56 701 aa10.26□□□□□ -0.77
SCAF1-203ENST00000598359 HYDINQ4G0P3 5121 aa10.26□□□□□ -0.77
SCAF1-203ENST00000598359 TRAV25A0A0B4J276 109 aa10.25□□□□□ -0.77
SCAF1-203ENST00000598359 LCE6AA0A183 80 aa10.25□□□□□ -0.77
SCAF1-203ENST00000598359 JTBO76095 146 aa10.25□□□□□ -0.77
SCAF1-203ENST00000598359 IFNA17P01571 189 aa10.25□□□□□ -0.77
SCAF1-203ENST00000598359 PVALBP20472 110 aaPredicted RBP10.25□□□□□ -0.77
SCAF1-203ENST00000598359 ERHP84090 104 aaKnown RBP10.25□□□□□ -0.77
SCAF1-203ENST00000598359 Q6ZRM9 215 aa10.25□□□□□ -0.77
SCAF1-203ENST00000598359 ZNF114Q8NC26 417 aa10.25□□□□□ -0.77
SCAF1-203ENST00000598359 LYRM2Q9NU23 88 aaPredicted RBP10.25□□□□□ -0.77
SCAF1-203ENST00000598359 IGHV3OR16-13A0A075B7E8 117 aa10.24□□□□□ -0.77
SCAF1-203ENST00000598359 IGHV3-74A0A0B4J1X5 117 aa10.24□□□□□ -0.77
SCAF1-203ENST00000598359 FAM90A26D6RGX4 464 aa10.24□□□□□ -0.77
SCAF1-203ENST00000598359 TSPAN4O14817 238 aa10.24□□□□□ -0.77
SCAF1-203ENST00000598359 NUPL2O15504 423 aaKnown RBP10.24□□□□□ -0.77
SCAF1-203ENST00000598359 ATG12O94817 140 aa10.24□□□□□ -0.77
SCAF1-203ENST00000598359 HOXA1P49639 335 aaPredicted RBP10.24□□□□□ -0.77
SCAF1-203ENST00000598359 RNASE11Q8TAA1 199 aaKnown RBP10.24□□□□□ -0.77
SCAF1-203ENST00000598359 PCNPQ8WW12 178 aaKnown RBP10.24□□□□□ -0.77
SCAF1-203ENST00000598359 ATP6V0BQ99437 205 aa10.24□□□□□ -0.77
SCAF1-203ENST00000598359 RNF2Q99496 336 aa10.24□□□□□ -0.77
SCAF1-203ENST00000598359 GGTLC1Q9BX51 225 aa10.24□□□□□ -0.77
SCAF1-203ENST00000598359 SMPXQ9UHP9 88 aa10.24□□□□□ -0.77
SCAF1-203ENST00000598359 PFDN2Q9UHV9 154 aa10.24□□□□□ -0.77
SCAF1-203ENST00000598359 IGKV3-7A0A075B6H7 116 aa10.23□□□□□ -0.77
SCAF1-203ENST00000598359 LOC102724200A0A096LPH7 203 aaPredicted RBP10.23□□□□□ -0.77
SCAF1-203ENST00000598359 IGHV7-4-1A0A0J9YVY3 117 aa10.23□□□□□ -0.77
SCAF1-203ENST00000598359 C15orf62A8K5M9 175 aa10.23□□□□□ -0.77
SCAF1-203ENST00000598359 K7EMT4 169 aa10.23□□□□□ -0.77
SCAF1-203ENST00000598359 GNG7O60262 68 aa10.23□□□□□ -0.77
SCAF1-203ENST00000598359 RNASE2P10153 161 aaKnown RBP10.23□□□□□ -0.77
SCAF1-203ENST00000598359 SNCAP37840 140 aa10.23□□□□□ -0.77
SCAF1-203ENST00000598359 TFPI2P48307 235 aa10.23□□□□□ -0.77
SCAF1-203ENST00000598359 POLR2GP62487 172 aaKnown RBP eCLIP10.23□□□□□ -0.77
SCAF1-203ENST00000598359 EWSR1Q01844 656 aaKnown RBP eCLIP10.23□□□□□ -0.77
SCAF1-203ENST00000598359 RELQ04864 619 aaPredicted RBP10.23□□□□□ -0.77
SCAF1-203ENST00000598359 BAXQ07812 192 aa10.23□□□□□ -0.77
SCAF1-203ENST00000598359 MLANAQ16655 118 aa10.23□□□□□ -0.77
SCAF1-203ENST00000598359 ODF3L2Q3SX64 289 aa10.23□□□□□ -0.77
SCAF1-203ENST00000598359 FAM74A1Q5RGS3 127 aa10.23□□□□□ -0.77
SCAF1-203ENST00000598359 RPL7L1Q6DKI1 246 aaKnown RBP10.23□□□□□ -0.77
SCAF1-203ENST00000598359 EIF5AL1Q6IS14 154 aaKnown RBP10.23□□□□□ -0.77
SCAF1-203ENST00000598359 RAB40CQ96S21 281 aa10.23□□□□□ -0.77
SCAF1-203ENST00000598359 SPAG8Q99932 426 aaPredicted RBP10.23□□□□□ -0.77
SCAF1-203ENST00000598359 RHPN1-AS1Q9BWJ2 59 aa10.23□□□□□ -0.77
SCAF1-203ENST00000598359 SLC25A31Q9H0C2 315 aa10.23□□□□□ -0.77
SCAF1-203ENST00000598359 MRPL36Q9P0J6 103 aaKnown RBP10.23□□□□□ -0.77
SCAF1-203ENST00000598359 CHEK1O14757 476 aa10.22□□□□□ -0.77
SCAF1-203ENST00000598359 FCGR2BP31994 310 aaPredicted RBP10.22□□□□□ -0.77
SCAF1-203ENST00000598359 PAX9P55771 341 aa10.22□□□□□ -0.77
SCAF1-203ENST00000598359 TAS2R30P59541 319 aa10.22□□□□□ -0.77
SCAF1-203ENST00000598359 TOR2AQ5JU69 321 aa10.22□□□□□ -0.77
SCAF1-203ENST00000598359 TMEM252Q8N6L7 170 aa10.22□□□□□ -0.77
SCAF1-203ENST00000598359 TMEM116Q8NCL8 245 aa10.22□□□□□ -0.77
SCAF1-203ENST00000598359 RNF141Q8WVD5 230 aa10.22□□□□□ -0.77
SCAF1-203ENST00000598359 TXN2Q99757 166 aa10.22□□□□□ -0.77
SCAF1-203ENST00000598359 BORCS7-ASMTA0A0B4J1R7 106 aa10.21□□□□□ -0.77
SCAF1-203ENST00000598359 IGHV3-66A0A0C4DH42 116 aa10.21□□□□□ -0.77
SCAF1-203ENST00000598359 IGSF23A1L1A6 192 aa10.21□□□□□ -0.77
SCAF1-203ENST00000598359 SSSCA1O60232 199 aa10.21□□□□□ -0.77
SCAF1-203ENST00000598359 NXPH3O95157 252 aa10.21□□□□□ -0.77
SCAF1-203ENST00000598359 TMEM50AO95807 157 aa10.21□□□□□ -0.77
SCAF1-203ENST00000598359 APOHP02749 345 aaPredicted RBP10.21□□□□□ -0.77
SCAF1-203ENST00000598359 SEC11BP0C7V7 166 aa10.21□□□□□ -0.77
SCAF1-203ENST00000598359 SULT1A2P50226 295 aa10.21□□□□□ -0.77
SCAF1-203ENST00000598359 VAMP2P63027 116 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms