RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 NARS2Q96I59 477 aaKnown RBP13.01□□□□□ -0.33
SHKBP1-203ENST00000594298 METTL26Q96S19 204 aa13.01□□□□□ -0.33
SHKBP1-203ENST00000594298 FAM25EA8MYX2 175 aa13□□□□□ -0.33
SHKBP1-203ENST00000594298 UBE2CO00762 179 aa13□□□□□ -0.33
SHKBP1-203ENST00000594298 CHEK1O14757 476 aa13□□□□□ -0.33
SHKBP1-203ENST00000594298 TSPAN4O14817 238 aa13□□□□□ -0.33
SHKBP1-203ENST00000594298 SPRY2O43597 315 aa13□□□□□ -0.33
SHKBP1-203ENST00000594298 PRAF2O60831 178 aa13□□□□□ -0.33
SHKBP1-203ENST00000594298 SCGB1D2O95969 90 aa13□□□□□ -0.33
SHKBP1-203ENST00000594298 FABP1P07148 127 aa13□□□□□ -0.33
SHKBP1-203ENST00000594298 CEMP1Q6PRD7 247 aaPredicted RBP13□□□□□ -0.33
SHKBP1-203ENST00000594298 ZNF414Q96IQ9 312 aa13□□□□□ -0.33
SHKBP1-203ENST00000594298 SMIM8Q96KF7 97 aa13□□□□□ -0.33
SHKBP1-203ENST00000594298 RAB40CQ96S21 281 aa13□□□□□ -0.33
SHKBP1-203ENST00000594298 ZFAND3Q9H8U3 227 aa13□□□□□ -0.33
SHKBP1-203ENST00000594298 PSENENQ9NZ42 101 aa13□□□□□ -0.33
SHKBP1-203ENST00000594298 KIR2DL5BA0A0G2JN68 375 aa12.99□□□□□ -0.33
SHKBP1-203ENST00000594298 KIR2DL5BA0A0G2JPC4 375 aa12.99□□□□□ -0.33
SHKBP1-203ENST00000594298 C5orf51A6NDU8 294 aa12.99□□□□□ -0.33
SHKBP1-203ENST00000594298 SSSCA1O60232 199 aa12.99□□□□□ -0.33
SHKBP1-203ENST00000594298 RD3LP0DJH9 198 aa12.99□□□□□ -0.33
SHKBP1-203ENST00000594298 TAS2R30P59541 319 aa12.99□□□□□ -0.33
SHKBP1-203ENST00000594298 EWSR1Q01844 656 aaKnown RBP eCLIP12.99□□□□□ -0.33
SHKBP1-203ENST00000594298 PMS2P11Q13670 270 aa12.99□□□□□ -0.33
SHKBP1-203ENST00000594298 GAMTQ14353 236 aa12.99□□□□□ -0.33
SHKBP1-203ENST00000594298 NRARPQ7Z6K4 114 aa12.99□□□□□ -0.33
SHKBP1-203ENST00000594298 KIR2DL5AQ8N109 375 aa12.99□□□□□ -0.33
SHKBP1-203ENST00000594298 KIR2DL5BQ8NHK3 375 aa12.99□□□□□ -0.33
SHKBP1-203ENST00000594298 OR4C46A6NHA9 309 aa12.98□□□□□ -0.33
SHKBP1-203ENST00000594298 ZFP92A6NM28 416 aa12.98□□□□□ -0.33
SHKBP1-203ENST00000594298 INMT-MINDY4F8WBC2 141 aa12.98□□□□□ -0.33
SHKBP1-203ENST00000594298 TOMM40O96008 361 aa12.98□□□□□ -0.33
SHKBP1-203ENST00000594298 PAFAH1B2P68402 229 aa12.98□□□□□ -0.33
SHKBP1-203ENST00000594298 GSG1LQ6UXU4 331 aa12.98□□□□□ -0.33
SHKBP1-203ENST00000594298 GRAMD2BQ96HH9 432 aa12.98□□□□□ -0.33
SHKBP1-203ENST00000594298 C2orf50Q96LR7 162 aa12.98□□□□□ -0.33
SHKBP1-203ENST00000594298 SNRPGP15A8MWD9 76 aa12.97□□□□□ -0.33
SHKBP1-203ENST00000594298 CMC4P56277 68 aaPredicted RBP12.97□□□□□ -0.33
SHKBP1-203ENST00000594298 DEFB135Q30KP9 77 aa12.97□□□□□ -0.33
SHKBP1-203ENST00000594298 RNF183Q96D59 192 aa12.97□□□□□ -0.33
SHKBP1-203ENST00000594298 RNF2Q99496 336 aa12.97□□□□□ -0.33
SHKBP1-203ENST00000594298 VSIRQ9H7M9 311 aa12.97□□□□□ -0.33
SHKBP1-203ENST00000594298 PFDN2Q9UHV9 154 aa12.97□□□□□ -0.33
SHKBP1-203ENST00000594298 IGHV3-49A0A0A0MS15 119 aa12.96□□□□□ -0.33
SHKBP1-203ENST00000594298 H3BP45 60 aa12.96□□□□□ -0.33
SHKBP1-203ENST00000594298 L7N2F9 121 aa12.96□□□□□ -0.33
SHKBP1-203ENST00000594298 CCSO14618 274 aa12.96□□□□□ -0.33
SHKBP1-203ENST00000594298 CRYBB3P26998 211 aa12.96□□□□□ -0.33
SHKBP1-203ENST00000594298 VAMP2P63027 116 aa12.96□□□□□ -0.33
SHKBP1-203ENST00000594298 ODF3L2Q3SX64 289 aa12.96□□□□□ -0.33
SHKBP1-203ENST00000594298 OR51G1Q8NGK1 321 aa12.96□□□□□ -0.33
SHKBP1-203ENST00000594298 MARVELD1Q9BSK0 173 aa12.96□□□□□ -0.33
SHKBP1-203ENST00000594298 UBQLN2Q9UHD9 624 aa12.96□□□□□ -0.33
SHKBP1-203ENST00000594298 KLK5Q9Y337 293 aaPredicted RBP12.96□□□□□ -0.33
SHKBP1-203ENST00000594298 IGHV3OR16-13A0A075B7E8 117 aa12.95□□□□□ -0.34
SHKBP1-203ENST00000594298 IGHV3-74A0A0B4J1X5 117 aa12.95□□□□□ -0.34
SHKBP1-203ENST00000594298 TSC22D2O75157 780 aa12.95□□□□□ -0.34
SHKBP1-203ENST00000594298 CFDP00746 253 aaPredicted RBP12.95□□□□□ -0.34
SHKBP1-203ENST00000594298 MBPP02686 304 aaPredicted RBP12.95□□□□□ -0.34
SHKBP1-203ENST00000594298 IL4P05112 153 aa12.95□□□□□ -0.34
SHKBP1-203ENST00000594298 HNRNPCP07910 306 aaKnown RBP eCLIP12.95□□□□□ -0.34
SHKBP1-203ENST00000594298 PVALBP20472 110 aaPredicted RBP12.95□□□□□ -0.34
SHKBP1-203ENST00000594298 EIF2B2P49770 351 aaKnown RBP12.95□□□□□ -0.34
SHKBP1-203ENST00000594298 TCF24Q7RTU0 167 aa12.95□□□□□ -0.34
SHKBP1-203ENST00000594298 TMEM217Q8N7C4 229 aa12.95□□□□□ -0.34
SHKBP1-203ENST00000594298 STPG3Q8N7X2 389 aa12.95□□□□□ -0.34
SHKBP1-203ENST00000594298 ST8SIA2Q92186 375 aa12.95□□□□□ -0.34
SHKBP1-203ENST00000594298 TRGV9Q99603 122 aa12.95□□□□□ -0.34
SHKBP1-203ENST00000594298 PSG1P11464 419 aa12.94□□□□□ -0.34
SHKBP1-203ENST00000594298 NUP62P37198 522 aaPredicted RBP12.94□□□□□ -0.34
SHKBP1-203ENST00000594298 PAX9P55771 341 aa12.94□□□□□ -0.34
SHKBP1-203ENST00000594298 RPL11P62913 178 aaKnown RBP12.94□□□□□ -0.34
SHKBP1-203ENST00000594298 FAM90A2PQ658T7 463 aa12.94□□□□□ -0.34
SHKBP1-203ENST00000594298 RABAC1Q9UI14 185 aa12.94□□□□□ -0.34
SHKBP1-203ENST00000594298 PRSS46E5RG02 174 aa12.93□□□□□ -0.34
SHKBP1-203ENST00000594298 DNASE2O00115 360 aaPredicted RBP12.93□□□□□ -0.34
SHKBP1-203ENST00000594298 APOHP02749 345 aaPredicted RBP12.93□□□□□ -0.34
SHKBP1-203ENST00000594298 AKR1C1Q04828 323 aa12.93□□□□□ -0.34
SHKBP1-203ENST00000594298 OR8G2PQ6IF36 304 aa12.93□□□□□ -0.34
SHKBP1-203ENST00000594298 TMEM14EPQ6UXP3 125 aa12.93□□□□□ -0.34
SHKBP1-203ENST00000594298 THAP8Q8NA92 274 aa12.93□□□□□ -0.34
SHKBP1-203ENST00000594298 OR10P1Q8NGE3 313 aa12.93□□□□□ -0.34
SHKBP1-203ENST00000594298 MAP6D1Q9H9H5 199 aa12.93□□□□□ -0.34
SHKBP1-203ENST00000594298 RCL1Q9Y2P8 373 aaKnown RBP12.93□□□□□ -0.34
SHKBP1-203ENST00000594298 LSM5Q9Y4Y9 91 aaKnown RBP12.93□□□□□ -0.34
SHKBP1-203ENST00000594298 IGHV3-66A0A0C4DH42 116 aa12.92□□□□□ -0.34
SHKBP1-203ENST00000594298 C7orf66A4D0T2 115 aa12.92□□□□□ -0.34
SHKBP1-203ENST00000594298 HELTA6NFD8 242 aa12.92□□□□□ -0.34
SHKBP1-203ENST00000594298 DFFBO76075 338 aa12.92□□□□□ -0.34
SHKBP1-203ENST00000594298 BCAP31P51572 246 aa12.92□□□□□ -0.34
SHKBP1-203ENST00000594298 AP2S1P53680 142 aaPredicted RBP12.92□□□□□ -0.34
SHKBP1-203ENST00000594298 MGAT4CQ9UBM8 478 aa12.92□□□□□ -0.34
SHKBP1-203ENST00000594298 U3KQE9 123 aa12.92□□□□□ -0.34
SHKBP1-203ENST00000594298 IGKV3-7A0A075B6H7 116 aa12.91□□□□□ -0.34
SHKBP1-203ENST00000594298 IGKV1D-37A0A075B6S9 117 aa12.91□□□□□ -0.34
SHKBP1-203ENST00000594298 TRAV2A0A0B4J234 112 aa12.91□□□□□ -0.34
SHKBP1-203ENST00000594298 SMCO3A2RU48 225 aa12.91□□□□□ -0.34
SHKBP1-203ENST00000594298 FNDC10F2Z333 226 aa12.91□□□□□ -0.34
SHKBP1-203ENST00000594298 K7EPK0 472 aa12.91□□□□□ -0.34
SHKBP1-203ENST00000594298 METTL15P1P0C7V9 234 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms