RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 MIFP14174 115 aa0.94□□□□□ -2.26
PPP4R1-227ENST00000583988 CTAG1AP78358 180 aa0.94□□□□□ -2.26
PPP4R1-227ENST00000583988 RHOGP84095 191 aa0.94□□□□□ -2.26
PPP4R1-227ENST00000583988 SURF2Q15527 256 aaPredicted RBP0.94□□□□□ -2.26
PPP4R1-227ENST00000583988 TMED4Q7Z7H5 227 aa0.94□□□□□ -2.26
PPP4R1-227ENST00000583988 LINC00311Q8N616 119 aa0.94□□□□□ -2.26
PPP4R1-227ENST00000583988 OR13D1Q8NGV5 346 aa0.94□□□□□ -2.26
PPP4R1-227ENST00000583988 AQP3Q92482 292 aa0.94□□□□□ -2.26
PPP4R1-227ENST00000583988 MRPL57Q9BQC6 102 aaKnown RBP0.94□□□□□ -2.26
PPP4R1-227ENST00000583988 TMEM70Q9BUB7 260 aa0.94□□□□□ -2.26
PPP4R1-227ENST00000583988 C6orf62Q9GZU0 229 aaPredicted RBP0.94□□□□□ -2.26
PPP4R1-227ENST00000583988 IL20Q9NYY1 176 aa0.94□□□□□ -2.26
PPP4R1-227ENST00000583988 HS3ST2Q9Y278 367 aa0.94□□□□□ -2.26
PPP4R1-227ENST00000583988 MED1Q15648 1581 aaPredicted RBP0.94□□□□□ -2.26
PPP4R1-227ENST00000583988 ZNF106Q9H2Y7 1883 aaKnown RBP0.94□□□□□ -2.26
PPP4R1-227ENST00000583988 ALPK2Q86TB3 2170 aa0.93□□□□□ -2.26
PPP4R1-227ENST00000583988 MICAL3Q7RTP6 2002 aa0.93□□□□□ -2.26
PPP4R1-227ENST00000583988 TRAV1-1A0A0B4J248 108 aa0.93□□□□□ -2.26
PPP4R1-227ENST00000583988 CLDN25C9JDP6 229 aa0.93□□□□□ -2.26
PPP4R1-227ENST00000583988 OR1I1O60431 355 aa0.93□□□□□ -2.26
PPP4R1-227ENST00000583988 GGCTO75223 188 aaKnown RBP0.93□□□□□ -2.26
PPP4R1-227ENST00000583988 ATP5G3P48201 142 aa0.93□□□□□ -2.26
PPP4R1-227ENST00000583988 SERPINB9P50453 376 aa0.93□□□□□ -2.26
PPP4R1-227ENST00000583988 DEFA3P59666 94 aa0.93□□□□□ -2.26
PPP4R1-227ENST00000583988 RAB4BP61018 213 aa0.93□□□□□ -2.26
PPP4R1-227ENST00000583988 RPL19P84098 196 aaKnown RBP0.93□□□□□ -2.26
PPP4R1-227ENST00000583988 MYL5Q02045 173 aa0.93□□□□□ -2.26
PPP4R1-227ENST00000583988 POU6F1Q14863 301 aa0.93□□□□□ -2.26
PPP4R1-227ENST00000583988 RRN3P1Q2M238 152 aa0.93□□□□□ -2.26
PPP4R1-227ENST00000583988 SCGB2B2Q4G0G5 96 aa0.93□□□□□ -2.26
PPP4R1-227ENST00000583988 BRMS1LQ5PSV4 323 aa0.93□□□□□ -2.26
PPP4R1-227ENST00000583988 DHRS4L2Q6PKH6 230 aa0.93□□□□□ -2.26
PPP4R1-227ENST00000583988 S100A7AQ86SG5 101 aa0.93□□□□□ -2.26
PPP4R1-227ENST00000583988 C15orf53Q8NAA6 179 aa0.93□□□□□ -2.26
PPP4R1-227ENST00000583988 LINC00301Q8NCQ3 95 aa0.93□□□□□ -2.26
PPP4R1-227ENST00000583988 OR52R1Q8NGF1 315 aa0.93□□□□□ -2.26
PPP4R1-227ENST00000583988 CDC26Q8NHZ8 85 aa0.93□□□□□ -2.26
PPP4R1-227ENST00000583988 C4orf3Q8WVX3 66 aa0.93□□□□□ -2.26
PPP4R1-227ENST00000583988 AP3S1Q92572 193 aa0.93□□□□□ -2.26
PPP4R1-227ENST00000583988 ODF3Q96PU9 254 aa0.93□□□□□ -2.26
PPP4R1-227ENST00000583988 LINC00467Q9BRT7 94 aa0.93□□□□□ -2.26
PPP4R1-227ENST00000583988 UTP11Q9Y3A2 253 aaKnown RBP0.93□□□□□ -2.26
PPP4R1-227ENST00000583988 ARFGEF3Q5TH69 2177 aa0.93□□□□□ -2.26
PPP4R1-227ENST00000583988 DENND4CQ5VZ89 1909 aa0.92□□□□□ -2.26
PPP4R1-227ENST00000583988 GEMIN2O14893 280 aaKnown RBP0.92□□□□□ -2.26
PPP4R1-227ENST00000583988 OR2T1O43869 369 aa0.92□□□□□ -2.26
PPP4R1-227ENST00000583988 CST8O60676 142 aa0.92□□□□□ -2.26
PPP4R1-227ENST00000583988 HYPMO75409 117 aa0.92□□□□□ -2.26
PPP4R1-227ENST00000583988 APOA2P02652 100 aa0.92□□□□□ -2.26
PPP4R1-227ENST00000583988 CYBAP13498 195 aa0.92□□□□□ -2.26
PPP4R1-227ENST00000583988 SSR2P43308 183 aa0.92□□□□□ -2.26
PPP4R1-227ENST00000583988 NCALDP61601 193 aa0.92□□□□□ -2.26
PPP4R1-227ENST00000583988 ESRGQ1W209 222 aa0.92□□□□□ -2.26
PPP4R1-227ENST00000583988 RNASE10Q5GAN6 216 aaKnown RBP0.92□□□□□ -2.26
PPP4R1-227ENST00000583988 AKR1C8PQ5T2L2 129 aa0.92□□□□□ -2.26
PPP4R1-227ENST00000583988 IFT20Q8IY31 132 aa0.92□□□□□ -2.26
PPP4R1-227ENST00000583988 SLC30A7Q8NEW0 376 aa0.92□□□□□ -2.26
PPP4R1-227ENST00000583988 OR13C6PQ8NH95 151 aa0.92□□□□□ -2.26
PPP4R1-227ENST00000583988 OR10J5Q8NHC4 309 aa0.92□□□□□ -2.26
PPP4R1-227ENST00000583988 WFDC5Q8TCV5 224 aa0.92□□□□□ -2.26
PPP4R1-227ENST00000583988 SFT2D1Q8WV19 159 aa0.92□□□□□ -2.26
PPP4R1-227ENST00000583988 PRADC1Q9BSG0 188 aa0.92□□□□□ -2.26
PPP4R1-227ENST00000583988 PBDC1Q9BVG4 233 aa0.92□□□□□ -2.26
PPP4R1-227ENST00000583988 BCL2L10Q9HD36 194 aa0.92□□□□□ -2.26
PPP4R1-227ENST00000583988 C14orf132Q9NPU4 83 aa0.92□□□□□ -2.26
PPP4R1-227ENST00000583988 RASL12Q9NYN1 266 aa0.92□□□□□ -2.26
PPP4R1-227ENST00000583988 EIF3AQ14152 1382 aaKnown RBP0.92□□□□□ -2.26
PPP4R1-227ENST00000583988 TAF1LQ8IZX4 1826 aa0.92□□□□□ -2.26
PPP4R1-227ENST00000583988 MIA2Q96PC5 1412 aa0.91□□□□□ -2.26
PPP4R1-227ENST00000583988 SBF1O95248 1867 aa0.91□□□□□ -2.26
PPP4R1-227ENST00000583988 EXPH5Q8NEV8 1989 aa0.91□□□□□ -2.26
PPP4R1-227ENST00000583988 A0A087WX48 190 aa0.91□□□□□ -2.26
PPP4R1-227ENST00000583988 IGKV1-9A0A0C4DH69 117 aa0.91□□□□□ -2.26
PPP4R1-227ENST00000583988 C2orf70A6NJV1 201 aa0.91□□□□□ -2.26
PPP4R1-227ENST00000583988 E5RI56 91 aa0.91□□□□□ -2.26
PPP4R1-227ENST00000583988 H7C1C5 153 aa0.91□□□□□ -2.26
PPP4R1-227ENST00000583988 BANF1O75531 89 aa0.91□□□□□ -2.26
PPP4R1-227ENST00000583988 IFNA1P01562 189 aa0.91□□□□□ -2.26
PPP4R1-227ENST00000583988 SRIP30626 198 aa0.91□□□□□ -2.26
PPP4R1-227ENST00000583988 PHBP35232 272 aa0.91□□□□□ -2.26
PPP4R1-227ENST00000583988 LCN6P62502 163 aa0.91□□□□□ -2.26
PPP4R1-227ENST00000583988 UBE2BP63146 152 aa0.91□□□□□ -2.26
PPP4R1-227ENST00000583988 PDE6HQ13956 83 aa0.91□□□□□ -2.26
PPP4R1-227ENST00000583988 C22orf39Q6P5X5 142 aa0.91□□□□□ -2.26
PPP4R1-227ENST00000583988 CANT1Q8WVQ1 401 aa0.91□□□□□ -2.26
PPP4R1-227ENST00000583988 SLAMF6Q96DU3 332 aa0.91□□□□□ -2.26
PPP4R1-227ENST00000583988 ADAT3Q96EY9 351 aaPredicted RBP0.91□□□□□ -2.26
PPP4R1-227ENST00000583988 TMEM133Q9H2Q1 129 aa0.91□□□□□ -2.26
PPP4R1-227ENST00000583988 LYRM2Q9NU23 88 aaPredicted RBP0.91□□□□□ -2.26
PPP4R1-227ENST00000583988 KLK9Q9UKQ9 250 aa0.91□□□□□ -2.26
PPP4R1-227ENST00000583988 SSR3Q9UNL2 185 aa0.91□□□□□ -2.26
PPP4R1-227ENST00000583988 OBSL1O75147 1896 aa0.9□□□□□ -2.26
PPP4R1-227ENST00000583988 LOC110117498A0A087WWA1 95 aa0.9□□□□□ -2.27
PPP4R1-227ENST00000583988 TRAV12-1A0A0B4J245 112 aa0.9□□□□□ -2.27
PPP4R1-227ENST00000583988 DUXBA0A1W2PPF3 345 aa0.9□□□□□ -2.27
PPP4R1-227ENST00000583988 TAX1BP3O14907 124 aa0.9□□□□□ -2.27
PPP4R1-227ENST00000583988 NDUFB3O43676 98 aa0.9□□□□□ -2.27
PPP4R1-227ENST00000583988 TIMM17BO60830 172 aa0.9□□□□□ -2.27
PPP4R1-227ENST00000583988 TCTAP57738 103 aa0.9□□□□□ -2.27
PPP4R1-227ENST00000583988 DYNLT1P63172 113 aa0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms