RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 PATE2Q6UY27 113 aa11.51□□□□□ -0.57
MKS1-211ENST00000581761 PQLC2Q6ZP29 291 aa11.51□□□□□ -0.57
MKS1-211ENST00000581761 CBLN2Q8IUK8 224 aa11.51□□□□□ -0.57
MKS1-211ENST00000581761 OR1B1Q8NGR6 318 aa11.51□□□□□ -0.57
MKS1-211ENST00000581761 FAM110DQ8TAY7 271 aaPredicted RBP11.51□□□□□ -0.57
MKS1-211ENST00000581761 CSPG4Q6UVK1 2322 aa11.51□□□□□ -0.57
MKS1-211ENST00000581761 TRAV5A0A0B4J249 113 aa11.5□□□□□ -0.57
MKS1-211ENST00000581761 C7orf77A4D0Y5 90 aa11.5□□□□□ -0.57
MKS1-211ENST00000581761 A6NDX4 124 aa11.5□□□□□ -0.57
MKS1-211ENST00000581761 ZNF727A8MUV8 499 aa11.5□□□□□ -0.57
MKS1-211ENST00000581761 F6UZH7 168 aa11.5□□□□□ -0.57
MKS1-211ENST00000581761 H3BUX3 64 aa11.5□□□□□ -0.57
MKS1-211ENST00000581761 OR7C2O60412 319 aa11.5□□□□□ -0.57
MKS1-211ENST00000581761 OR2J3O76001 311 aa11.5□□□□□ -0.57
MKS1-211ENST00000581761 NDUFB8O95169 186 aa11.5□□□□□ -0.57
MKS1-211ENST00000581761 FABP1P07148 127 aa11.5□□□□□ -0.57
MKS1-211ENST00000581761 ORM2P19652 201 aa11.5□□□□□ -0.57
MKS1-211ENST00000581761 AKR1C3P42330 323 aa11.5□□□□□ -0.57
MKS1-211ENST00000581761 KIAA0141Q14154 515 aaPredicted RBP11.5□□□□□ -0.57
MKS1-211ENST00000581761 RHEBQ15382 184 aa11.5□□□□□ -0.57
MKS1-211ENST00000581761 ZNF674Q2M3X9 581 aa11.5□□□□□ -0.57
MKS1-211ENST00000581761 RPUSD4Q96CM3 377 aaKnown RBP11.5□□□□□ -0.57
MKS1-211ENST00000581761 TXNDC17Q9BRA2 123 aa11.5□□□□□ -0.57
MKS1-211ENST00000581761 SLC25A2Q9BXI2 301 aa11.5□□□□□ -0.57
MKS1-211ENST00000581761 THYN1Q9P016 225 aa11.5□□□□□ -0.57
MKS1-211ENST00000581761 CR1P17927 2039 aa11.49□□□□□ -0.57
MKS1-211ENST00000581761 ELOA3CA0A087WX78 387 aaPredicted RBP11.49□□□□□ -0.57
MKS1-211ENST00000581761 PDE6DO43924 150 aa11.49□□□□□ -0.57
MKS1-211ENST00000581761 HYPMO75409 117 aa11.49□□□□□ -0.57
MKS1-211ENST00000581761 HIST1H1BP16401 226 aaKnown RBP11.49□□□□□ -0.57
MKS1-211ENST00000581761 MFAP4P55083 255 aa11.49□□□□□ -0.57
MKS1-211ENST00000581761 LYZP61626 148 aa11.49□□□□□ -0.57
MKS1-211ENST00000581761 Q56UQ5 140 aa11.49□□□□□ -0.57
MKS1-211ENST00000581761 C9orf152Q5JTZ5 239 aa11.49□□□□□ -0.57
MKS1-211ENST00000581761 OR5AU1Q8NGC0 362 aa11.49□□□□□ -0.57
MKS1-211ENST00000581761 ZNF503Q96F45 646 aa11.49□□□□□ -0.57
MKS1-211ENST00000581761 FAM167A-AS1Q96KT0 104 aa11.49□□□□□ -0.57
MKS1-211ENST00000581761 TMEM68Q96MH6 324 aa11.49□□□□□ -0.57
MKS1-211ENST00000581761 SMIM7Q9BQ49 75 aa11.49□□□□□ -0.57
MKS1-211ENST00000581761 SMCO4Q9NRQ5 59 aa11.49□□□□□ -0.57
MKS1-211ENST00000581761 ZNF355PQ9NSJ1 428 aa11.49□□□□□ -0.57
MKS1-211ENST00000581761 YTHDF2Q9Y5A9 579 aaKnown RBP11.49□□□□□ -0.57
MKS1-211ENST00000581761 S4R3C0 116 aa11.49□□□□□ -0.57
MKS1-211ENST00000581761 TRAV30A0A087WSZ9 112 aa11.48□□□□□ -0.57
MKS1-211ENST00000581761 TSPAN4O14817 238 aa11.48□□□□□ -0.57
MKS1-211ENST00000581761 PSG1P11464 419 aa11.48□□□□□ -0.57
MKS1-211ENST00000581761 PLP1P60201 277 aa11.48□□□□□ -0.57
MKS1-211ENST00000581761 MORN5Q5VZ52 161 aa11.48□□□□□ -0.57
MKS1-211ENST00000581761 C16orf82Q7Z2V1 217 aa11.48□□□□□ -0.57
MKS1-211ENST00000581761 LINC00305Q7Z4B0 112 aa11.48□□□□□ -0.57
MKS1-211ENST00000581761 C21orf62Q9NYP8 219 aa11.48□□□□□ -0.57
MKS1-211ENST00000581761 NAT8Q9UHE5 227 aa11.48□□□□□ -0.57
MKS1-211ENST00000581761 FBXL7Q9UJT9 491 aa11.48□□□□□ -0.57
MKS1-211ENST00000581761 HIGD1AQ9Y241 93 aa11.48□□□□□ -0.57
MKS1-211ENST00000581761 ARL2-SNX15V9GYD0 113 aa11.48□□□□□ -0.57
MKS1-211ENST00000581761 HIVEP2P31629 2446 aa11.48□□□□□ -0.57
MKS1-211ENST00000581761 JMJD1CQ15652 2540 aa11.48□□□□□ -0.57
MKS1-211ENST00000581761 MDFIC2A0A1B0GVS7 189 aa11.47□□□□□ -0.57
MKS1-211ENST00000581761 LINC01548A6NM66 108 aa11.47□□□□□ -0.57
MKS1-211ENST00000581761 GNG7O60262 68 aa11.47□□□□□ -0.57
MKS1-211ENST00000581761 IGKV1-17P01599 117 aa11.47□□□□□ -0.57
MKS1-211ENST00000581761 RD3LP0DJH9 198 aa11.47□□□□□ -0.57
MKS1-211ENST00000581761 UBE2L3P68036 154 aaKnown RBP11.47□□□□□ -0.57
MKS1-211ENST00000581761 ZNF48Q96MX3 618 aaPredicted RBP11.47□□□□□ -0.57
MKS1-211ENST00000581761 UHRF2Q96PU4 802 aa11.47□□□□□ -0.57
MKS1-211ENST00000581761 PAXXQ9BUH6 204 aa11.47□□□□□ -0.57
MKS1-211ENST00000581761 PARLQ9H300 379 aa11.47□□□□□ -0.57
MKS1-211ENST00000581761 SDF2L1Q9HCN8 221 aa11.47□□□□□ -0.57
MKS1-211ENST00000581761 PITPNC1Q9UKF7 332 aa11.47□□□□□ -0.57
MKS1-211ENST00000581761 FN1P02751 2386 aaKnown RBP11.47□□□□□ -0.57
MKS1-211ENST00000581761 G3V318 75 aa11.46□□□□□ -0.57
MKS1-211ENST00000581761 SCGB2A1O75556 95 aa11.46□□□□□ -0.57
MKS1-211ENST00000581761 TOMM40O96008 361 aa11.46□□□□□ -0.57
MKS1-211ENST00000581761 IGHV3-23P01764 117 aa11.46□□□□□ -0.57
MKS1-211ENST00000581761 AMY1AP04745 511 aa11.46□□□□□ -0.57
MKS1-211ENST00000581761 OR10J4P0C629 311 aa11.46□□□□□ -0.57
MKS1-211ENST00000581761 PNRC1Q12796 327 aaPredicted RBP11.46□□□□□ -0.57
MKS1-211ENST00000581761 TMEM241Q24JQ0 296 aa11.46□□□□□ -0.57
MKS1-211ENST00000581761 DEFB112Q30KQ8 113 aa11.46□□□□□ -0.57
MKS1-211ENST00000581761 CYB5R2Q6BCY4 276 aa11.46□□□□□ -0.57
MKS1-211ENST00000581761 BCL6BQ8N143 479 aaPredicted RBP11.46□□□□□ -0.57
MKS1-211ENST00000581761 VN1R17PQ8TDU5 208 aa11.46□□□□□ -0.57
MKS1-211ENST00000581761 OR51M1Q9H341 326 aa11.46□□□□□ -0.57
MKS1-211ENST00000581761 ANK3Q12955 4377 aaKnown RBP11.46□□□□□ -0.58
MKS1-211ENST00000581761 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.46□□□□□ -0.589e-7■■■■■ 26.8
MKS1-211ENST00000581761 SCO2A0A1W2PP80 73 aa11.45□□□□□ -0.58
MKS1-211ENST00000581761 M0QZK8 103 aa11.45□□□□□ -0.58
MKS1-211ENST00000581761 PYYP10082 97 aa11.45□□□□□ -0.58
MKS1-211ENST00000581761 NPPCP23582 126 aa11.45□□□□□ -0.58
MKS1-211ENST00000581761 KLK9Q2XQG4 91 aa11.45□□□□□ -0.58
MKS1-211ENST00000581761 OR51G1Q8NGK1 321 aa11.45□□□□□ -0.58
MKS1-211ENST00000581761 KLK9Q9UKQ9 250 aa11.45□□□□□ -0.58
MKS1-211ENST00000581761 ABCA1O95477 2261 aa11.45□□□□□ -0.58
MKS1-211ENST00000581761 TRAV41A0A0B4J266 112 aa11.44□□□□□ -0.58
MKS1-211ENST00000581761 A0A1W2PRE2 83 aa11.44□□□□□ -0.58
MKS1-211ENST00000581761 INAFM1C9JVW0 142 aa11.44□□□□□ -0.58
MKS1-211ENST00000581761 NDUFB4O95168 129 aa11.44□□□□□ -0.58
MKS1-211ENST00000581761 FSHBP01225 129 aa11.44□□□□□ -0.58
MKS1-211ENST00000581761 CRIP2P52943 208 aaPredicted RBP11.44□□□□□ -0.58
MKS1-211ENST00000581761 YPEL3P61236 119 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms