RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 CASP8AP2Q9UKL3 1982 aa0.37□□□□□ -2.35
SMCHD1-207ENST00000581711 UBR5O95071 2799 aaPredicted RBP0.37□□□□□ -2.35
SMCHD1-207ENST00000581711 ADGRB2O60241 1585 aa0.36□□□□□ -2.35
SMCHD1-207ENST00000581711 TAF1LQ8IZX4 1826 aa0.36□□□□□ -2.35
SMCHD1-207ENST00000581711 USP9YO00507 2555 aaPredicted RBP0.36□□□□□ -2.35
SMCHD1-207ENST00000581711 POLQO75417 2590 aa0.36□□□□□ -2.35
SMCHD1-207ENST00000581711 OBSL1O75147 1896 aa0.36□□□□□ -2.35
SMCHD1-207ENST00000581711 SBF1O95248 1867 aa0.36□□□□□ -2.35
SMCHD1-207ENST00000581711 TRAV12-1A0A0B4J245 112 aa0.36□□□□□ -2.35
SMCHD1-207ENST00000581711 TRAV26-2A0A0B4J265 109 aa0.36□□□□□ -2.35
SMCHD1-207ENST00000581711 FAM236DA0A1B0GTK5 79 aa0.36□□□□□ -2.35
SMCHD1-207ENST00000581711 CCDC160A6NGH7 325 aa0.36□□□□□ -2.35
SMCHD1-207ENST00000581711 KPNA3O00505 521 aaPredicted RBP0.36□□□□□ -2.35
SMCHD1-207ENST00000581711 OR2B3O76000 313 aa0.36□□□□□ -2.35
SMCHD1-207ENST00000581711 OR2J2O76002 312 aa0.36□□□□□ -2.35
SMCHD1-207ENST00000581711 LYPLA2O95372 231 aa0.36□□□□□ -2.35
SMCHD1-207ENST00000581711 CNIH1O95406 144 aa0.36□□□□□ -2.35
SMCHD1-207ENST00000581711 RPS17P08708 135 aaKnown RBP0.36□□□□□ -2.35
SMCHD1-207ENST00000581711 FAM236CP0DP71 79 aa0.36□□□□□ -2.35
SMCHD1-207ENST00000581711 S100A4P26447 101 aaKnown RBP0.36□□□□□ -2.35
SMCHD1-207ENST00000581711 AESQ08117 197 aa0.36□□□□□ -2.35
SMCHD1-207ENST00000581711 SPRNQ5BIV9 151 aa0.36□□□□□ -2.35
SMCHD1-207ENST00000581711 TEX261Q6UWH6 196 aa0.36□□□□□ -2.35
SMCHD1-207ENST00000581711 OR6V1Q8N148 313 aa0.36□□□□□ -2.35
SMCHD1-207ENST00000581711 OR8J2Q8NGG1 315 aa0.36□□□□□ -2.35
SMCHD1-207ENST00000581711 CT55Q8WUE5 264 aa0.36□□□□□ -2.35
SMCHD1-207ENST00000581711 PPP1R14BQ96C90 147 aa0.36□□□□□ -2.35
SMCHD1-207ENST00000581711 TRIM4Q9C037 500 aa0.36□□□□□ -2.35
SMCHD1-207ENST00000581711 DCSTAMPQ9H295 470 aa0.36□□□□□ -2.35
SMCHD1-207ENST00000581711 OSTCQ9NRP0 149 aa0.36□□□□□ -2.35
SMCHD1-207ENST00000581711 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.36□□□□□ -2.35
SMCHD1-207ENST00000581711 NHP2Q9NX24 153 aaKnown RBP0.36□□□□□ -2.35
SMCHD1-207ENST00000581711 U3KQ87 197 aa0.36□□□□□ -2.35
SMCHD1-207ENST00000581711 HIVEP1P15822 2718 aa0.36□□□□□ -2.35
SMCHD1-207ENST00000581711 CHD6Q8TD26 2715 aa0.36□□□□□ -2.35
SMCHD1-207ENST00000581711 PLB1Q6P1J6 1458 aa0.35□□□□□ -2.35
SMCHD1-207ENST00000581711 hCG_1818297A0A087WSY0 165 aa0.35□□□□□ -2.35
SMCHD1-207ENST00000581711 A0A087WUJ7 227 aa0.35□□□□□ -2.35
SMCHD1-207ENST00000581711 hADV38S2A0JD32 116 aa0.35□□□□□ -2.35
SMCHD1-207ENST00000581711 C7orf71A4D174 169 aa0.35□□□□□ -2.35
SMCHD1-207ENST00000581711 SMIM9A6NGZ8 99 aa0.35□□□□□ -2.35
SMCHD1-207ENST00000581711 A8MT66 165 aa0.35□□□□□ -2.35
SMCHD1-207ENST00000581711 PROSCO94903 275 aa0.35□□□□□ -2.35
SMCHD1-207ENST00000581711 PPIBP23284 216 aaKnown RBP0.35□□□□□ -2.35
SMCHD1-207ENST00000581711 CASP1P29466 404 aa0.35□□□□□ -2.35
SMCHD1-207ENST00000581711 YPEL3P61236 119 aaPredicted RBP0.35□□□□□ -2.35
SMCHD1-207ENST00000581711 HIST1H3AP68431 136 aa0.35□□□□□ -2.35
SMCHD1-207ENST00000581711 H3F3AP84243 136 aa0.35□□□□□ -2.35
SMCHD1-207ENST00000581711 EDDM3AQ14507 147 aa0.35□□□□□ -2.35
SMCHD1-207ENST00000581711 RGS21Q2M5E4 152 aa0.35□□□□□ -2.35
SMCHD1-207ENST00000581711 IAH1Q2TAA2 248 aaPredicted RBP0.35□□□□□ -2.35
SMCHD1-207ENST00000581711 C1orf137Q5JT78 98 aa0.35□□□□□ -2.35
SMCHD1-207ENST00000581711 GDPD1Q8N9F7 314 aa0.35□□□□□ -2.35
SMCHD1-207ENST00000581711 BORCS5Q969J3 196 aa0.35□□□□□ -2.35
SMCHD1-207ENST00000581711 GPR146Q96CH1 333 aa0.35□□□□□ -2.35
SMCHD1-207ENST00000581711 C2orf50Q96LR7 162 aa0.35□□□□□ -2.35
SMCHD1-207ENST00000581711 CYSLTR1Q9Y271 337 aa0.35□□□□□ -2.35
SMCHD1-207ENST00000581711 SLC35A3Q9Y2D2 325 aa0.35□□□□□ -2.35
SMCHD1-207ENST00000581711 KIF1BO60333 1816 aa0.35□□□□□ -2.35
SMCHD1-207ENST00000581711 NCOA1Q15788 1441 aa0.35□□□□□ -2.35
SMCHD1-207ENST00000581711 SCN8AQ9UQD0 1980 aa0.35□□□□□ -2.35
SMCHD1-207ENST00000581711 SNRNP200O75643 2136 aaKnown RBP0.35□□□□□ -2.35
SMCHD1-207ENST00000581711 NEO1Q92859 1461 aa0.35□□□□□ -2.35
SMCHD1-207ENST00000581711 ROBO3Q96MS0 1386 aa0.34□□□□□ -2.35
SMCHD1-207ENST00000581711 DMBT1Q9UGM3 2413 aaPredicted RBP0.34□□□□□ -2.35
SMCHD1-207ENST00000581711 A0A087X0T9 212 aa0.34□□□□□ -2.36
SMCHD1-207ENST00000581711 ZNF736B4DX44 427 aaPredicted RBP0.34□□□□□ -2.36
SMCHD1-207ENST00000581711 J3QRK9 145 aa0.34□□□□□ -2.36
SMCHD1-207ENST00000581711 NCR3O14931 201 aa0.34□□□□□ -2.36
SMCHD1-207ENST00000581711 PDE6DO43924 150 aa0.34□□□□□ -2.36
SMCHD1-207ENST00000581711 ZNF682O95780 498 aa0.34□□□□□ -2.36
SMCHD1-207ENST00000581711 TCRBP04435 133 aa0.34□□□□□ -2.36
SMCHD1-207ENST00000581711 C8GP07360 202 aa0.34□□□□□ -2.36
SMCHD1-207ENST00000581711 OR4E1P0C645 316 aa0.34□□□□□ -2.36
SMCHD1-207ENST00000581711 SMIM17P0DL12 118 aa0.34□□□□□ -2.36
SMCHD1-207ENST00000581711 CDKN2CP42773 168 aa0.34□□□□□ -2.36
SMCHD1-207ENST00000581711 AP3S2P59780 193 aa0.34□□□□□ -2.36
SMCHD1-207ENST00000581711 MYL6P60660 151 aa0.34□□□□□ -2.36
SMCHD1-207ENST00000581711 LSM6P62312 80 aaKnown RBP0.34□□□□□ -2.36
SMCHD1-207ENST00000581711 RANP62826 216 aaKnown RBP0.34□□□□□ -2.36
SMCHD1-207ENST00000581711 CHD3Q12873 2000 aaKnown RBP0.34□□□□□ -2.36
SMCHD1-207ENST00000581711 SRSF6Q13247 344 aaKnown RBP0.34□□□□□ -2.36
SMCHD1-207ENST00000581711 SPA17Q15506 151 aa0.34□□□□□ -2.36
SMCHD1-207ENST00000581711 C12orf74Q32Q52 190 aa0.34□□□□□ -2.36
SMCHD1-207ENST00000581711 LINC01554Q52M75 96 aa0.34□□□□□ -2.36
SMCHD1-207ENST00000581711 TMEM97Q5BJF2 176 aa0.34□□□□□ -2.36
SMCHD1-207ENST00000581711 CLECL1Q8IZS7 167 aa0.34□□□□□ -2.36
SMCHD1-207ENST00000581711 C12orf45Q8N5I9 185 aaPredicted RBP0.34□□□□□ -2.36
SMCHD1-207ENST00000581711 MNS1Q8NEH6 495 aa0.34□□□□□ -2.36
SMCHD1-207ENST00000581711 OR51A2Q8NGJ7 313 aa0.34□□□□□ -2.36
SMCHD1-207ENST00000581711 OR8D4Q8NGM9 314 aa0.34□□□□□ -2.36
SMCHD1-207ENST00000581711 OR13D1Q8NGV5 346 aa0.34□□□□□ -2.36
SMCHD1-207ENST00000581711 OR10J5Q8NHC4 309 aa0.34□□□□□ -2.36
SMCHD1-207ENST00000581711 RNASE7Q9H1E1 156 aaKnown RBP0.34□□□□□ -2.36
SMCHD1-207ENST00000581711 OR51V1Q9H2C8 321 aa0.34□□□□□ -2.36
SMCHD1-207ENST00000581711 UQCC1Q9NVA1 299 aa0.34□□□□□ -2.36
SMCHD1-207ENST00000581711 C14orf105Q9NVL8 296 aa0.34□□□□□ -2.36
SMCHD1-207ENST00000581711 UBAP1Q9NZ09 502 aa0.34□□□□□ -2.36
SMCHD1-207ENST00000581711 GLTPQ9NZD2 209 aa0.34□□□□□ -2.36
SMCHD1-207ENST00000581711 EPDR1Q9UM22 224 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms