RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 V9GYV3 84 aa10.8□□□□□ -0.68
PCDHGB3-201ENST00000576222 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.8□□□□□ -0.68
PCDHGB3-201ENST00000576222 C16orf92Q96LL3 132 aa10.8□□□□□ -0.68
PCDHGB3-201ENST00000576222 NOTCH4Q99466 2003 aa10.79□□□□□ -0.68
PCDHGB3-201ENST00000576222 MLNRO43193 412 aa10.79□□□□□ -0.68
PCDHGB3-201ENST00000576222 MYOD1P15172 320 aa10.79□□□□□ -0.68
PCDHGB3-201ENST00000576222 B3GALT5-AS1P59052 145 aa10.79□□□□□ -0.68
PCDHGB3-201ENST00000576222 ZNF479Q96JC4 524 aa10.79□□□□□ -0.68
PCDHGB3-201ENST00000576222 FAM90A27PA6NNH2 459 aa10.79□□□□□ -0.68
PCDHGB3-201ENST00000576222 ESDP10768 282 aa10.79□□□□□ -0.68
PCDHGB3-201ENST00000576222 CCL3L1P16619 93 aa10.79□□□□□ -0.68
PCDHGB3-201ENST00000576222 ERVK11-1P61568 191 aa10.79□□□□□ -0.68
PCDHGB3-201ENST00000576222 MEF2CQ06413 473 aaPredicted RBP10.79□□□□□ -0.68
PCDHGB3-201ENST00000576222 SSC4DQ8WTU2 575 aa10.79□□□□□ -0.68
PCDHGB3-201ENST00000576222 PRSS2P07478 247 aa10.79□□□□□ -0.68
PCDHGB3-201ENST00000576222 KIR3DS1Q14943 382 aa10.79□□□□□ -0.68
PCDHGB3-201ENST00000576222 S4R3C0 116 aa10.79□□□□□ -0.68
PCDHGB3-201ENST00000576222 SRRM5B3KS81 715 aa10.78□□□□□ -0.68
PCDHGB3-201ENST00000576222 APOMO95445 188 aa10.78□□□□□ -0.68
PCDHGB3-201ENST00000576222 LHFPL4Q7Z7J7 247 aa10.78□□□□□ -0.68
PCDHGB3-201ENST00000576222 LGALS3P17931 250 aaKnown RBP10.78□□□□□ -0.68
PCDHGB3-201ENST00000576222 C10orf55Q5SWW7 151 aa10.78□□□□□ -0.68
PCDHGB3-201ENST00000576222 BCL6BQ8N143 479 aaPredicted RBP10.78□□□□□ -0.68
PCDHGB3-201ENST00000576222 COLQQ9Y215 455 aaPredicted RBP10.78□□□□□ -0.68
PCDHGB3-201ENST00000576222 F2Z2F3 143 aa10.78□□□□□ -0.68
PCDHGB3-201ENST00000576222 F2RL2O00254 374 aa10.78□□□□□ -0.68
PCDHGB3-201ENST00000576222 NUPR1O60356 82 aa10.78□□□□□ -0.68
PCDHGB3-201ENST00000576222 DPM2O94777 84 aa10.78□□□□□ -0.68
PCDHGB3-201ENST00000576222 IL18BPO95998 194 aa10.78□□□□□ -0.68
PCDHGB3-201ENST00000576222 TCRAP04437 139 aa10.78□□□□□ -0.68
PCDHGB3-201ENST00000576222 METTL26Q96S19 204 aa10.78□□□□□ -0.68
PCDHGB3-201ENST00000576222 NCOR1O75376 2440 aa10.78□□□□□ -0.68
PCDHGB3-201ENST00000576222 PPIAL4CA0A0B4J2A2 164 aa10.77□□□□□ -0.68
PCDHGB3-201ENST00000576222 SH2D7A6NKC9 451 aaPredicted RBP10.77□□□□□ -0.68
PCDHGB3-201ENST00000576222 NDUFA3O95167 84 aa10.77□□□□□ -0.68
PCDHGB3-201ENST00000576222 PPIAL4GP0DN37 164 aa10.77□□□□□ -0.68
PCDHGB3-201ENST00000576222 DLX6P56179 175 aa10.77□□□□□ -0.68
PCDHGB3-201ENST00000576222 CD177Q8N6Q3 437 aa10.77□□□□□ -0.68
PCDHGB3-201ENST00000576222 OR10J6PQ8NGY7 276 aa10.77□□□□□ -0.68
PCDHGB3-201ENST00000576222 SCGB3A1Q96QR1 104 aa10.77□□□□□ -0.68
PCDHGB3-201ENST00000576222 GTSF1LQ9H1H1 148 aa10.77□□□□□ -0.68
PCDHGB3-201ENST00000576222 IGHV2-26A0A0B4J1V2 119 aa10.77□□□□□ -0.69
PCDHGB3-201ENST00000576222 NDUFS8O00217 210 aa10.77□□□□□ -0.69
PCDHGB3-201ENST00000576222 PAX2Q02962 417 aa10.77□□□□□ -0.69
PCDHGB3-201ENST00000576222 SLAQ13239 276 aa10.77□□□□□ -0.69
PCDHGB3-201ENST00000576222 MLANAQ16655 118 aa10.77□□□□□ -0.69
PCDHGB3-201ENST00000576222 TDRG1Q3Y452 100 aa10.77□□□□□ -0.69
PCDHGB3-201ENST00000576222 RAXQ9Y2V3 346 aa10.77□□□□□ -0.69
PCDHGB3-201ENST00000576222 DOCK10Q96BY6 2186 aa10.77□□□□□ -0.69
PCDHGB3-201ENST00000576222 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.77□□□□□ -0.69
PCDHGB3-201ENST00000576222 RAB9AP51151 201 aa10.77□□□□□ -0.69
PCDHGB3-201ENST00000576222 PRSS8Q16651 343 aa10.77□□□□□ -0.69
PCDHGB3-201ENST00000576222 RPRMLQ8N4K4 120 aa10.77□□□□□ -0.69
PCDHGB3-201ENST00000576222 NXT2Q9NPJ8 142 aaKnown RBP10.77□□□□□ -0.69
PCDHGB3-201ENST00000576222 PKDREJQ9NTG1 2253 aa10.76□□□□□ -0.69
PCDHGB3-201ENST00000576222 FNDC10F2Z333 226 aa10.76□□□□□ -0.69
PCDHGB3-201ENST00000576222 PPBPP02775 128 aa10.76□□□□□ -0.69
PCDHGB3-201ENST00000576222 CENPVQ7Z7K6 275 aaPredicted RBP10.76□□□□□ -0.69
PCDHGB3-201ENST00000576222 C8orf46Q8TAG6 207 aa10.76□□□□□ -0.69
PCDHGB3-201ENST00000576222 RPUSD1Q9UJJ7 312 aaKnown RBP10.76□□□□□ -0.69
PCDHGB3-201ENST00000576222 RCHY1Q96PM5 261 aa10.76□□□□□ -0.69
PCDHGB3-201ENST00000576222 COL4A3Q01955 1670 aa10.76□□□□□ -0.69
PCDHGB3-201ENST00000576222 THSD7BQ9C0I4 1608 aa10.76□□□□□ -0.69
PCDHGB3-201ENST00000576222 COL4A6Q14031 1691 aa10.76□□□□□ -0.69
PCDHGB3-201ENST00000576222 D6R8Y8 96 aa10.76□□□□□ -0.69
PCDHGB3-201ENST00000576222 SNCGO76070 127 aa10.76□□□□□ -0.69
PCDHGB3-201ENST00000576222 GAGE13Q4V321 117 aa10.76□□□□□ -0.69
PCDHGB3-201ENST00000576222 SFTA2Q6UW10 78 aa10.76□□□□□ -0.69
PCDHGB3-201ENST00000576222 FAM231BA6NCW3 169 aa10.76□□□□□ -0.69
PCDHGB3-201ENST00000576222 IGKCP01834 107 aa10.76□□□□□ -0.69
PCDHGB3-201ENST00000576222 MAJINQ3KP22 176 aa10.76□□□□□ -0.69
PCDHGB3-201ENST00000576222 LOXL3P58215 753 aa10.75□□□□□ -0.69
PCDHGB3-201ENST00000576222 KHDC1LQ5JSQ8 128 aa10.75□□□□□ -0.69
PCDHGB3-201ENST00000576222 Q6ZVH6 145 aa10.75□□□□□ -0.69
PCDHGB3-201ENST00000576222 FAM169BQ8N8A8 192 aa10.75□□□□□ -0.69
PCDHGB3-201ENST00000576222 C11orf52Q96A22 123 aa10.75□□□□□ -0.69
PCDHGB3-201ENST00000576222 FABP5P3A8MUU1 101 aa10.75□□□□□ -0.69
PCDHGB3-201ENST00000576222 SS18L1O75177 396 aaPredicted RBP10.75□□□□□ -0.69
PCDHGB3-201ENST00000576222 TMEM170BQ5T4T1 132 aa10.75□□□□□ -0.69
PCDHGB3-201ENST00000576222 EXOC3-AS1Q8N2X6 119 aa10.75□□□□□ -0.69
PCDHGB3-201ENST00000576222 BEX4Q9NWD9 120 aaPredicted RBP10.75□□□□□ -0.69
PCDHGB3-201ENST00000576222 IGHV3OR16-13A0A075B7E8 117 aa10.75□□□□□ -0.69
PCDHGB3-201ENST00000576222 IGHV3-74A0A0B4J1X5 117 aa10.75□□□□□ -0.69
PCDHGB3-201ENST00000576222 FTH1P19P0C7X4 201 aa10.75□□□□□ -0.69
PCDHGB3-201ENST00000576222 C9orf106Q8NAJ2 232 aa10.75□□□□□ -0.69
PCDHGB3-201ENST00000576222 CACNA1HO95180 2353 aa10.74□□□□□ -0.69
PCDHGB3-201ENST00000576222 CCL25O15444 150 aa10.74□□□□□ -0.69
PCDHGB3-201ENST00000576222 ZNF329Q86UD4 541 aa10.74□□□□□ -0.69
PCDHGB3-201ENST00000576222 VCX2Q9H322 139 aa10.74□□□□□ -0.69
PCDHGB3-201ENST00000576222 ZNF71Q9NQZ8 489 aaPredicted RBP10.74□□□□□ -0.69
PCDHGB3-201ENST00000576222 TRAV8-1A0A0A6YYK1 113 aa10.74□□□□□ -0.69
PCDHGB3-201ENST00000576222 VDAC2P45880 294 aaPredicted RBP10.74□□□□□ -0.69
PCDHGB3-201ENST00000576222 FXYD7P58549 80 aa10.74□□□□□ -0.69
PCDHGB3-201ENST00000576222 FAM53AQ6NSI3 398 aaPredicted RBP10.74□□□□□ -0.69
PCDHGB3-201ENST00000576222 SPACA3Q8IXA5 215 aa10.74□□□□□ -0.69
PCDHGB3-201ENST00000576222 RNF125Q96EQ8 232 aa10.74□□□□□ -0.69
PCDHGB3-201ENST00000576222 EP300Q09472 2414 aaPredicted RBP10.74□□□□□ -0.69
PCDHGB3-201ENST00000576222 PRB4P10163 310 aaPredicted RBP10.74□□□□□ -0.69
PCDHGB3-201ENST00000576222 KIR2DL4Q99706 377 aa10.74□□□□□ -0.69
PCDHGB3-201ENST00000576222 GGTLC3B5MD39 225 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms