RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 SAA4P35542 130 aa14.34□□□□□ -0.11
SMPD3-211ENST00000568373 NDPQ00604 133 aa14.34□□□□□ -0.11
SMPD3-211ENST00000568373 ASPHD1Q5U4P2 390 aa14.34□□□□□ -0.11
SMPD3-211ENST00000568373 OR10G8Q8NGN5 311 aa14.34□□□□□ -0.11
SMPD3-211ENST00000568373 IGKV1-17P01599 117 aa14.33□□□□□ -0.12
SMPD3-211ENST00000568373 TYMSP04818 313 aa14.33□□□□□ -0.12
SMPD3-211ENST00000568373 TRGC1P0CF51 173 aa14.33□□□□□ -0.12
SMPD3-211ENST00000568373 RNF224P0DH78 156 aa14.33□□□□□ -0.12
SMPD3-211ENST00000568373 NDUFA6P56556 154 aa14.33□□□□□ -0.12
SMPD3-211ENST00000568373 FOXL1Q12952 345 aa14.33□□□□□ -0.12
SMPD3-211ENST00000568373 TIGITQ495A1 244 aa14.33□□□□□ -0.12
SMPD3-211ENST00000568373 RBM14Q96PK6 669 aaKnown RBP14.33□□□□□ -0.12
SMPD3-211ENST00000568373 PIMREGQ9BSJ6 248 aa14.33□□□□□ -0.12
SMPD3-211ENST00000568373 FAM3BP58499 235 aaPredicted RBP14.32□□□□□ -0.12
SMPD3-211ENST00000568373 SGMS2Q8NHU3 365 aa14.32□□□□□ -0.12
SMPD3-211ENST00000568373 FAM168AQ92567 244 aa14.32□□□□□ -0.12
SMPD3-211ENST00000568373 UBR5O95071 2799 aaPredicted RBP14.32□□□□□ -0.12
SMPD3-211ENST00000568373 HOXA5P20719 270 aa14.32□□□□□ -0.12
SMPD3-211ENST00000568373 LYZP61626 148 aa14.32□□□□□ -0.12
SMPD3-211ENST00000568373 KLF17Q5JT82 389 aaPredicted RBP14.32□□□□□ -0.12
SMPD3-211ENST00000568373 ZNF329Q86UD4 541 aa14.32□□□□□ -0.12
SMPD3-211ENST00000568373 C1RLQ9NZP8 487 aa14.32□□□□□ -0.12
SMPD3-211ENST00000568373 HIGD1AQ9Y241 93 aa14.32□□□□□ -0.12
SMPD3-211ENST00000568373 ABCA2Q9BZC7 2435 aa14.32□□□□□ -0.12
SMPD3-211ENST00000568373 IGLV11-55A0A075B6I3 123 aa14.31□□□□□ -0.12
SMPD3-211ENST00000568373 S100A8P05109 93 aa14.31□□□□□ -0.12
SMPD3-211ENST00000568373 FABP1P07148 127 aa14.31□□□□□ -0.12
SMPD3-211ENST00000568373 BRS3P32247 399 aa14.31□□□□□ -0.12
SMPD3-211ENST00000568373 FAM120AOSQ5T036 256 aa14.31□□□□□ -0.12
SMPD3-211ENST00000568373 TTC9CQ8N5M4 171 aa14.31□□□□□ -0.12
SMPD3-211ENST00000568373 Q8N9W7 124 aa14.31□□□□□ -0.12
SMPD3-211ENST00000568373 BTF3L4Q96K17 158 aa14.31□□□□□ -0.12
SMPD3-211ENST00000568373 FANCD2OSQ96PS1 177 aa14.31□□□□□ -0.12
SMPD3-211ENST00000568373 CSMD1Q96PZ7 3565 aa14.31□□□□□ -0.12
SMPD3-211ENST00000568373 NPFFO15130 113 aa14.3□□□□□ -0.12
SMPD3-211ENST00000568373 RD3LP0DJH9 198 aa14.3□□□□□ -0.12
SMPD3-211ENST00000568373 GP9P14770 177 aa14.3□□□□□ -0.12
SMPD3-211ENST00000568373 MYCNOSP40205 109 aa14.3□□□□□ -0.12
SMPD3-211ENST00000568373 C10orf105Q8TEF2 133 aa14.3□□□□□ -0.12
SMPD3-211ENST00000568373 IGF2BP2-AS1Q96M15 143 aa14.3□□□□□ -0.12
SMPD3-211ENST00000568373 SPOCK3Q9BQ16 436 aa14.3□□□□□ -0.12
SMPD3-211ENST00000568373 TCEAL7Q9BRU2 100 aa14.3□□□□□ -0.12
SMPD3-211ENST00000568373 ZNF98A6NK75 572 aa14.3□□□□□ -0.12
SMPD3-211ENST00000568373 CDC42EP3Q9UKI2 254 aa14.3□□□□□ -0.12
SMPD3-211ENST00000568373 IGHV7-81A0A0B4J1V7 117 aa14.29□□□□□ -0.12
SMPD3-211ENST00000568373 IGHV4-61A0A0C4DH41 118 aa14.29□□□□□ -0.12
SMPD3-211ENST00000568373 NDUFS8O00217 210 aa14.29□□□□□ -0.12
SMPD3-211ENST00000568373 MEOX2P50222 304 aa14.29□□□□□ -0.12
SMPD3-211ENST00000568373 PAX8Q06710 450 aa14.29□□□□□ -0.12
SMPD3-211ENST00000568373 OR5I1Q13606 314 aa14.29□□□□□ -0.12
SMPD3-211ENST00000568373 PIP4P2Q8N4L2 257 aa14.29□□□□□ -0.12
SMPD3-211ENST00000568373 C12orf57Q99622 126 aa14.29□□□□□ -0.12
SMPD3-211ENST00000568373 VPS13CQ709C8 3753 aa14.29□□□□□ -0.12
SMPD3-211ENST00000568373 CENPVL3A0A0U1RRI6 287 aa14.29□□□□□ -0.12
SMPD3-211ENST00000568373 PEX7O00628 323 aa14.29□□□□□ -0.12
SMPD3-211ENST00000568373 HLA-DRB1P01911 266 aa14.29□□□□□ -0.12
SMPD3-211ENST00000568373 SNRPCP09234 159 aaKnown RBP14.29□□□□□ -0.12
SMPD3-211ENST00000568373 NBEAP1P0C6P0 100 aa14.29□□□□□ -0.12
SMPD3-211ENST00000568373 CDX1P47902 265 aaPredicted RBP14.29□□□□□ -0.12
SMPD3-211ENST00000568373 TAS2R60P59551 318 aa14.29□□□□□ -0.12
SMPD3-211ENST00000568373 ERVFC1-1P60608 527 aa14.29□□□□□ -0.12
SMPD3-211ENST00000568373 RANP62826 216 aaKnown RBP14.29□□□□□ -0.12
SMPD3-211ENST00000568373 LEMD1Q68G75 181 aa14.29□□□□□ -0.12
SMPD3-211ENST00000568373 BLNKQ8WV28 456 aa14.29□□□□□ -0.12
SMPD3-211ENST00000568373 SLC25A39Q9BZJ4 359 aaPredicted RBP14.29□□□□□ -0.12
SMPD3-211ENST00000568373 MRPL27Q9P0M9 148 aaKnown RBP14.29□□□□□ -0.12
SMPD3-211ENST00000568373 SPG11Q96JI7 2443 aa14.29□□□□□ -0.12
SMPD3-211ENST00000568373 TENM4Q6N022 2769 aa14.28□□□□□ -0.12
SMPD3-211ENST00000568373 A0A0U1RQK1 487 aa14.28□□□□□ -0.12
SMPD3-211ENST00000568373 VWC2LB2RUY7 222 aa14.28□□□□□ -0.12
SMPD3-211ENST00000568373 IGLV2-8P01709 118 aa14.28□□□□□ -0.12
SMPD3-211ENST00000568373 EGR2P11161 476 aaPredicted RBP14.28□□□□□ -0.12
SMPD3-211ENST00000568373 CNN1P51911 297 aaKnown RBP14.28□□□□□ -0.12
SMPD3-211ENST00000568373 ATP5J2P56134 94 aa14.28□□□□□ -0.12
SMPD3-211ENST00000568373 CLEC2AQ6UVW9 174 aa14.28□□□□□ -0.12
SMPD3-211ENST00000568373 IL36BQ9NZH7 164 aa14.28□□□□□ -0.12
SMPD3-211ENST00000568373 ZNF320A2RRD8 509 aa14.27□□□□□ -0.12
SMPD3-211ENST00000568373 SLC17A3O00476 420 aa14.27□□□□□ -0.12
SMPD3-211ENST00000568373 TOMM40O96008 361 aa14.27□□□□□ -0.12
SMPD3-211ENST00000568373 GCGP01275 180 aa14.27□□□□□ -0.12
SMPD3-211ENST00000568373 ACTL10Q5JWF8 245 aa14.27□□□□□ -0.12
SMPD3-211ENST00000568373 LINC00479Q96M42 142 aa14.27□□□□□ -0.12
SMPD3-211ENST00000568373 ZNF48Q96MX3 618 aaPredicted RBP14.27□□□□□ -0.12
SMPD3-211ENST00000568373 TRAV30A0A087WSZ9 112 aa14.27□□□□□ -0.13
SMPD3-211ENST00000568373 V9GYV3 84 aa14.27□□□□□ -0.13
SMPD3-211ENST00000568373 MFAP4P55083 255 aa14.26□□□□□ -0.13
SMPD3-211ENST00000568373 ZNF600Q6ZNG1 722 aa14.26□□□□□ -0.13
SMPD3-211ENST00000568373 OSTCQ9NRP0 149 aa14.26□□□□□ -0.13
SMPD3-211ENST00000568373 THYN1Q9P016 225 aa14.26□□□□□ -0.13
SMPD3-211ENST00000568373 TMEM14CQ9P0S9 112 aa14.26□□□□□ -0.13
SMPD3-211ENST00000568373 S4R3C0 116 aa14.26□□□□□ -0.13
SMPD3-211ENST00000568373 CRYBG3Q68DQ2 2970 aa14.26□□□□□ -0.13
SMPD3-211ENST00000568373 LRRK2Q5S007 2527 aa14.26□□□□□ -0.13
SMPD3-211ENST00000568373 TRAV9-1A0A075B6T8 112 aa14.26□□□□□ -0.13
SMPD3-211ENST00000568373 GNG7O60262 68 aa14.26□□□□□ -0.13
SMPD3-211ENST00000568373 SMIM6P0DI80 62 aa14.26□□□□□ -0.13
SMPD3-211ENST00000568373 ZNF491Q8N8L2 437 aa14.26□□□□□ -0.13
SMPD3-211ENST00000568373 HSPB9Q9BQS6 159 aa14.26□□□□□ -0.13
SMPD3-211ENST00000568373 EPDR1Q9UM22 224 aa14.26□□□□□ -0.13
SMPD3-211ENST00000568373 PGPA6NDG6 321 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms