RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 MPDU1O75352 247 aa12.7□□□□□ -0.38
CLN6-208ENST00000567060 SAP30O75446 220 aa12.7□□□□□ -0.38
CLN6-208ENST00000567060 CCNKO75909 580 aa12.7□□□□□ -0.38
CLN6-208ENST00000567060 YIF1AO95070 293 aa12.7□□□□□ -0.38
CLN6-208ENST00000567060 CSN3P07498 182 aa12.7□□□□□ -0.38
CLN6-208ENST00000567060 IGLL1P15814 213 aa12.7□□□□□ -0.38
CLN6-208ENST00000567060 RPL12P30050 165 aaKnown RBP12.7□□□□□ -0.38
CLN6-208ENST00000567060 ARL16Q0P5N6 197 aa12.7□□□□□ -0.38
CLN6-208ENST00000567060 RAB31Q13636 194 aa12.7□□□□□ -0.38
CLN6-208ENST00000567060 TOMM20LQ6UXN7 152 aa12.7□□□□□ -0.38
CLN6-208ENST00000567060 UNQ9165/PRO28630Q6UXU0 137 aa12.7□□□□□ -0.38
CLN6-208ENST00000567060 TMEM217Q8N7C4 229 aa12.7□□□□□ -0.38
CLN6-208ENST00000567060 ZFAND3Q9H8U3 227 aa12.7□□□□□ -0.38
CLN6-208ENST00000567060 LSM4Q9Y4Z0 139 aaKnown RBP12.7□□□□□ -0.38
CLN6-208ENST00000567060 A0A1W2PS18 150 aa12.69□□□□□ -0.38
CLN6-208ENST00000567060 DFFBO76075 338 aa12.69□□□□□ -0.38
CLN6-208ENST00000567060 FOLR2P14207 255 aa12.69□□□□□ -0.38
CLN6-208ENST00000567060 CBLN1P23435 193 aa12.69□□□□□ -0.38
CLN6-208ENST00000567060 EGFEM1PQ0D2K5 195 aa12.69□□□□□ -0.38
CLN6-208ENST00000567060 NARS2Q96I59 477 aaKnown RBP12.69□□□□□ -0.38
CLN6-208ENST00000567060 ZNF414Q96IQ9 312 aa12.69□□□□□ -0.38
CLN6-208ENST00000567060 AQP10Q96PS8 301 aa12.69□□□□□ -0.38
CLN6-208ENST00000567060 METTL26Q96S19 204 aa12.69□□□□□ -0.38
CLN6-208ENST00000567060 C20orf24Q9BUV8 137 aa12.69□□□□□ -0.38
CLN6-208ENST00000567060 TMEM231Q9H6L2 316 aa12.69□□□□□ -0.38
CLN6-208ENST00000567060 SLC45A2Q9UMX9 530 aa12.69□□□□□ -0.38
CLN6-208ENST00000567060 HSPB11Q9Y547 144 aa12.69□□□□□ -0.38
CLN6-208ENST00000567060 IGKV1OR2-108A0A075B7D4 117 aa12.68□□□□□ -0.38
CLN6-208ENST00000567060 IGHV3-35A0A0C4DH35 117 aa12.68□□□□□ -0.38
CLN6-208ENST00000567060 K7EIL1 84 aa12.68□□□□□ -0.38
CLN6-208ENST00000567060 IGLV1-51P01701 117 aa12.68□□□□□ -0.38
CLN6-208ENST00000567060 PSG1P11464 419 aa12.68□□□□□ -0.38
CLN6-208ENST00000567060 PXDC1Q5TGL8 231 aa12.68□□□□□ -0.38
CLN6-208ENST00000567060 S100A7AQ86SG5 101 aa12.68□□□□□ -0.38
CLN6-208ENST00000567060 ZNF546Q86UE3 836 aa12.68□□□□□ -0.38
CLN6-208ENST00000567060 BPIFCQ8NFQ6 507 aa12.68□□□□□ -0.38
CLN6-208ENST00000567060 OR5C1Q8NGR4 320 aa12.68□□□□□ -0.38
CLN6-208ENST00000567060 WDR83OSQ9Y284 106 aa12.68□□□□□ -0.38
CLN6-208ENST00000567060 TRAV25A0A0B4J276 109 aa12.67□□□□□ -0.38
CLN6-208ENST00000567060 WI2-2373I1.2A0A1W2PRP0 233 aa12.67□□□□□ -0.38
CLN6-208ENST00000567060 NPPCP23582 126 aa12.67□□□□□ -0.38
CLN6-208ENST00000567060 NHLH2Q02577 135 aa12.67□□□□□ -0.38
CLN6-208ENST00000567060 TM4SF20Q53R12 229 aa12.67□□□□□ -0.38
CLN6-208ENST00000567060 LCN12Q6JVE5 192 aa12.67□□□□□ -0.38
CLN6-208ENST00000567060 CYP2G1PQ6ZSU1 146 aa12.67□□□□□ -0.38
CLN6-208ENST00000567060 INO80EQ8NBZ0 244 aaPredicted RBP12.67□□□□□ -0.38
CLN6-208ENST00000567060 DYNLRB2Q8TF09 96 aa12.67□□□□□ -0.38
CLN6-208ENST00000567060 RNF125Q96EQ8 232 aa12.67□□□□□ -0.38
CLN6-208ENST00000567060 RNF24Q9Y225 148 aa12.67□□□□□ -0.38
CLN6-208ENST00000567060 IGHV7-4-1A0A0J9YVY3 117 aa12.66□□□□□ -0.38
CLN6-208ENST00000567060 IL4P05112 153 aa12.66□□□□□ -0.38
CLN6-208ENST00000567060 CRYBB3P26998 211 aa12.66□□□□□ -0.38
CLN6-208ENST00000567060 PLP1P60201 277 aa12.66□□□□□ -0.38
CLN6-208ENST00000567060 ZNF90Q03938 601 aa12.66□□□□□ -0.38
CLN6-208ENST00000567060 ATP5SQ99766 215 aa12.66□□□□□ -0.38
CLN6-208ENST00000567060 PARD6GQ9BYG4 376 aaPredicted RBP12.66□□□□□ -0.38
CLN6-208ENST00000567060 KCNIP2Q9NS61 270 aa12.66□□□□□ -0.38
CLN6-208ENST00000567060 SMPXQ9UHP9 88 aa12.66□□□□□ -0.38
CLN6-208ENST00000567060 HNRNPCP07910 306 aaKnown RBP eCLIP12.65□□□□□ -0.38
CLN6-208ENST00000567060 LAMTOR1Q6IAA8 161 aa12.65□□□□□ -0.38
CLN6-208ENST00000567060 GRAMD2BQ96HH9 432 aa12.65□□□□□ -0.38
CLN6-208ENST00000567060 VSIRQ9H7M9 311 aa12.65□□□□□ -0.38
CLN6-208ENST00000567060 RABAC1Q9UI14 185 aa12.65□□□□□ -0.38
CLN6-208ENST00000567060 TNFSF18Q9UNG2 199 aa12.65□□□□□ -0.38
CLN6-208ENST00000567060 DYNC2H1Q8NCM8 4307 aaKnown RBP12.64□□□□□ -0.39
CLN6-208ENST00000567060 AGPAT2O15120 278 aa12.64□□□□□ -0.39
CLN6-208ENST00000567060 EIF2B2P49770 351 aaKnown RBP12.64□□□□□ -0.39
CLN6-208ENST00000567060 ZNF266Q14584 549 aa12.64□□□□□ -0.39
CLN6-208ENST00000567060 DEFB114Q30KQ6 69 aa12.64□□□□□ -0.39
CLN6-208ENST00000567060 BTNL8Q6UX41 500 aa12.64□□□□□ -0.39
CLN6-208ENST00000567060 ADAMTSL5Q6ZMM2 481 aa12.64□□□□□ -0.39
CLN6-208ENST00000567060 TCTE3Q8IZS6 198 aa12.64□□□□□ -0.39
CLN6-208ENST00000567060 U3KQE9 123 aa12.64□□□□□ -0.39
CLN6-208ENST00000567060 RYR2Q92736 4967 aa12.63□□□□□ -0.39
CLN6-208ENST00000567060 SACSQ9NZJ4 4579 aa12.63□□□□□ -0.39
CLN6-208ENST00000567060 FXYD6-FXYD2A0A087WZ82 144 aa12.63□□□□□ -0.39
CLN6-208ENST00000567060 UBE2L5PA0A1B0GUS4 154 aa12.63□□□□□ -0.39
CLN6-208ENST00000567060 HMSDA8MTL9 139 aa12.63□□□□□ -0.39
CLN6-208ENST00000567060 G3V3Q6 166 aa12.63□□□□□ -0.39
CLN6-208ENST00000567060 CHEK1O14757 476 aa12.63□□□□□ -0.39
CLN6-208ENST00000567060 IFNA5P01569 189 aa12.63□□□□□ -0.39
CLN6-208ENST00000567060 RPL29P47914 159 aaKnown RBP12.63□□□□□ -0.39
CLN6-208ENST00000567060 CAMLGP49069 296 aa12.63□□□□□ -0.39
CLN6-208ENST00000567060 AP2S1P53680 142 aaPredicted RBP12.63□□□□□ -0.39
CLN6-208ENST00000567060 Q5BKY6 102 aa12.63□□□□□ -0.39
CLN6-208ENST00000567060 RHPN1-AS1Q9BWJ2 59 aa12.63□□□□□ -0.39
CLN6-208ENST00000567060 SORL1Q92673 2214 aa12.63□□□□□ -0.39
CLN6-208ENST00000567060 C17orf112F2Z3M2 114 aa12.62□□□□□ -0.39
CLN6-208ENST00000567060 LINC00869P0C866 280 aa12.62□□□□□ -0.39
CLN6-208ENST00000567060 FGF7P21781 194 aa12.62□□□□□ -0.39
CLN6-208ENST00000567060 KRTAP10-11P60412 298 aa12.62□□□□□ -0.39
CLN6-208ENST00000567060 LYZP61626 148 aa12.62□□□□□ -0.39
CLN6-208ENST00000567060 ZNF345Q14585 488 aa12.62□□□□□ -0.39
CLN6-208ENST00000567060 CLINT1Q14677 625 aa12.62□□□□□ -0.39
CLN6-208ENST00000567060 USF2Q15853 346 aaPredicted RBP12.62□□□□□ -0.39
CLN6-208ENST00000567060 C1orf194Q5T5A4 169 aa12.62□□□□□ -0.39
CLN6-208ENST00000567060 Q6ZRG5 221 aa12.62□□□□□ -0.39
CLN6-208ENST00000567060 MGST2Q99735 147 aa12.62□□□□□ -0.39
CLN6-208ENST00000567060 NEURL2Q9BR09 285 aa12.62□□□□□ -0.39
CLN6-208ENST00000567060 WDR61Q9GZS3 305 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms