RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 DSCAMO60469 2012 aa12.64□□□□□ -0.39
COMMD4-215ENST00000566843 PRR14LQ5THK1 2151 aa12.64□□□□□ -0.39
COMMD4-215ENST00000566843 OR2T8A6NH00 312 aa12.64□□□□□ -0.39
COMMD4-215ENST00000566843 TOX4O94842 621 aa12.64□□□□□ -0.39
COMMD4-215ENST00000566843 MOSP00540 346 aa12.64□□□□□ -0.39
COMMD4-215ENST00000566843 LIPFP07098 398 aa12.64□□□□□ -0.39
COMMD4-215ENST00000566843 PSG1P11464 419 aa12.64□□□□□ -0.39
COMMD4-215ENST00000566843 FOXA3P55318 350 aaPredicted RBP12.64□□□□□ -0.39
COMMD4-215ENST00000566843 DUX4L9Q6RFH8 374 aaPredicted RBP12.64□□□□□ -0.39
COMMD4-215ENST00000566843 PDPNQ86YL7 162 aa12.64□□□□□ -0.39
COMMD4-215ENST00000566843 C9orf106Q8NAJ2 232 aa12.64□□□□□ -0.39
COMMD4-215ENST00000566843 STXBP6Q8NFX7 210 aa12.64□□□□□ -0.39
COMMD4-215ENST00000566843 TM4SF5O14894 197 aa12.63□□□□□ -0.39
COMMD4-215ENST00000566843 SLC25A5P05141 298 aaKnown RBP12.63□□□□□ -0.39
COMMD4-215ENST00000566843 FAM201AQ5SY85 155 aa12.63□□□□□ -0.39
COMMD4-215ENST00000566843 LDLRAD2Q5SZI1 272 aa12.63□□□□□ -0.39
COMMD4-215ENST00000566843 ERASQ7Z444 233 aa12.63□□□□□ -0.39
COMMD4-215ENST00000566843 NPIPB3Q92617 1050 aa12.63□□□□□ -0.39
COMMD4-215ENST00000566843 PLSCR4Q9NRQ2 329 aa12.63□□□□□ -0.39
COMMD4-215ENST00000566843 LOC102724200A0A096LPH7 203 aaPredicted RBP12.63□□□□□ -0.39
COMMD4-215ENST00000566843 FAM231BA6NCW3 169 aa12.63□□□□□ -0.39
COMMD4-215ENST00000566843 HIST1H1AQ02539 215 aaPredicted RBP12.63□□□□□ -0.39
COMMD4-215ENST00000566843 RBPMS2Q6ZRY4 209 aaKnown RBP12.63□□□□□ -0.39
COMMD4-215ENST00000566843 ITLN1Q8WWA0 313 aa12.63□□□□□ -0.39
COMMD4-215ENST00000566843 GAFA1Q96PS6 74 aa12.63□□□□□ -0.39
COMMD4-215ENST00000566843 CGB1A6NKQ9 187 aa12.62□□□□□ -0.39
COMMD4-215ENST00000566843 LTAP01374 205 aa12.62□□□□□ -0.39
COMMD4-215ENST00000566843 GATA4P43694 442 aa12.62□□□□□ -0.39
COMMD4-215ENST00000566843 TMEM177Q53S58 311 aa12.62□□□□□ -0.39
COMMD4-215ENST00000566843 AMMECR1LQ6DCA0 310 aa12.62□□□□□ -0.39
COMMD4-215ENST00000566843 LINC00305Q7Z4B0 112 aa12.62□□□□□ -0.39
COMMD4-215ENST00000566843 TMEM167AQ8TBQ9 72 aa12.62□□□□□ -0.39
COMMD4-215ENST00000566843 H1FXQ92522 213 aaKnown RBP12.62□□□□□ -0.39
COMMD4-215ENST00000566843 FMC1Q96HJ9 113 aa12.62□□□□□ -0.39
COMMD4-215ENST00000566843 MAP1LC3CQ9BXW4 147 aa12.62□□□□□ -0.39
COMMD4-215ENST00000566843 CEP250Q9BV73 2442 aa12.62□□□□□ -0.39
COMMD4-215ENST00000566843 PGPA6NDG6 321 aa12.62□□□□□ -0.39
COMMD4-215ENST00000566843 E7EUB6 86 aa12.62□□□□□ -0.39
COMMD4-215ENST00000566843 P01737 135 aa12.62□□□□□ -0.39
COMMD4-215ENST00000566843 CD24P25063 80 aa12.62□□□□□ -0.39
COMMD4-215ENST00000566843 NHLH1Q02575 133 aa12.62□□□□□ -0.39
COMMD4-215ENST00000566843 ZCCHC24Q8N2G6 241 aaKnown RBP12.62□□□□□ -0.39
COMMD4-215ENST00000566843 OR4A5Q8NH83 315 aa12.62□□□□□ -0.39
COMMD4-215ENST00000566843 PGLYRP4Q96LB8 373 aa12.62□□□□□ -0.39
COMMD4-215ENST00000566843 ZNF71Q9NQZ8 489 aaPredicted RBP12.62□□□□□ -0.39
COMMD4-215ENST00000566843 SLC25A15Q9Y619 301 aa12.62□□□□□ -0.39
COMMD4-215ENST00000566843 CBY3A6NI87 242 aa12.61□□□□□ -0.39
COMMD4-215ENST00000566843 NPIPB6E9PJ23 425 aa12.61□□□□□ -0.39
COMMD4-215ENST00000566843 WT1-ASQ06250 92 aa12.61□□□□□ -0.39
COMMD4-215ENST00000566843 PRR31Q5SQ13 230 aa12.61□□□□□ -0.39
COMMD4-215ENST00000566843 LINC01545Q5VT33 79 aa12.61□□□□□ -0.39
COMMD4-215ENST00000566843 PERPQ96FX8 193 aa12.61□□□□□ -0.39
COMMD4-215ENST00000566843 HARBI1Q96MB7 349 aa12.61□□□□□ -0.39
COMMD4-215ENST00000566843 MRPL20Q9BYC9 149 aaKnown RBP12.61□□□□□ -0.39
COMMD4-215ENST00000566843 ZNRD1Q9P1U0 126 aa12.61□□□□□ -0.39
COMMD4-215ENST00000566843 RNF7Q9UBF6 113 aa12.61□□□□□ -0.39
COMMD4-215ENST00000566843 APOA2P02652 100 aa12.6□□□□□ -0.39
COMMD4-215ENST00000566843 PSG9Q00887 426 aa12.6□□□□□ -0.39
COMMD4-215ENST00000566843 FAM71F2Q6NXP2 309 aa12.6□□□□□ -0.39
COMMD4-215ENST00000566843 BHLHA15Q7RTS1 189 aaPredicted RBP12.6□□□□□ -0.39
COMMD4-215ENST00000566843 OR5AN1Q8NGI8 311 aa12.6□□□□□ -0.39
COMMD4-215ENST00000566843 PMCHL2Q9BQD1 86 aa12.6□□□□□ -0.39
COMMD4-215ENST00000566843 MRPL36Q9P0J6 103 aaKnown RBP12.6□□□□□ -0.39
COMMD4-215ENST00000566843 HSPB8Q9UJY1 196 aa12.6□□□□□ -0.39
COMMD4-215ENST00000566843 SPRY3O43610 288 aa12.6□□□□□ -0.39
COMMD4-215ENST00000566843 SUB1P53999 127 aaKnown RBP eCLIP12.6□□□□□ -0.39
COMMD4-215ENST00000566843 C16orf54Q6UWD8 224 aa12.6□□□□□ -0.39
COMMD4-215ENST00000566843 ZNF788Q6ZQV5 615 aa12.6□□□□□ -0.39
COMMD4-215ENST00000566843 RBMXL3Q8N7X1 1067 aaKnown RBP12.6□□□□□ -0.39
COMMD4-215ENST00000566843 C5orf17Q8NAS9 161 aa12.6□□□□□ -0.39
COMMD4-215ENST00000566843 RND1Q92730 232 aa12.6□□□□□ -0.39
COMMD4-215ENST00000566843 RNF24Q9Y225 148 aa12.6□□□□□ -0.39
COMMD4-215ENST00000566843 DYSFO75923 2080 aa12.59□□□□□ -0.39
COMMD4-215ENST00000566843 HAX1O00165 279 aa12.59□□□□□ -0.39
COMMD4-215ENST00000566843 APOHP02749 345 aaPredicted RBP12.59□□□□□ -0.39
COMMD4-215ENST00000566843 SGK494Q96LW2 274 aa12.59□□□□□ -0.39
COMMD4-215ENST00000566843 VPS25Q9BRG1 176 aa12.59□□□□□ -0.39
COMMD4-215ENST00000566843 HEATR1Q9H583 2144 aaKnown RBP12.59□□□□□ -0.39
COMMD4-215ENST00000566843 OVOL3O00110 214 aa12.59□□□□□ -0.39
COMMD4-215ENST00000566843 PLAUP00749 431 aa12.59□□□□□ -0.39
COMMD4-215ENST00000566843 NBEAP1P0C6P0 100 aa12.59□□□□□ -0.39
COMMD4-215ENST00000566843 GPR183P32249 361 aa12.59□□□□□ -0.39
COMMD4-215ENST00000566843 RAI1Q7Z5J4 1906 aaPredicted RBP12.58□□□□□ -0.39
COMMD4-215ENST00000566843 DCHS1Q96JQ0 3298 aa12.58□□□□□ -0.4
COMMD4-215ENST00000566843 IGLV3-9A0A075B6K5 115 aa12.58□□□□□ -0.4
COMMD4-215ENST00000566843 NDUFS8O00217 210 aa12.58□□□□□ -0.4
COMMD4-215ENST00000566843 CRYGCP07315 174 aa12.58□□□□□ -0.4
COMMD4-215ENST00000566843 COX8AP10176 69 aa12.58□□□□□ -0.4
COMMD4-215ENST00000566843 GLRXP35754 106 aa12.58□□□□□ -0.4
COMMD4-215ENST00000566843 ATP1A1-AS1Q5TC04 95 aa12.58□□□□□ -0.4
COMMD4-215ENST00000566843 C2orf91Q6ZV80 131 aa12.58□□□□□ -0.4
COMMD4-215ENST00000566843 BLNKQ8WV28 456 aa12.58□□□□□ -0.4
COMMD4-215ENST00000566843 CCL13Q99616 98 aa12.58□□□□□ -0.4
COMMD4-215ENST00000566843 PEF1Q9UBV8 284 aaKnown RBP12.58□□□□□ -0.4
COMMD4-215ENST00000566843 TRAV8-6A0A0B4J262 113 aa12.58□□□□□ -0.4
COMMD4-215ENST00000566843 CHEK1O14757 476 aa12.58□□□□□ -0.4
COMMD4-215ENST00000566843 TCRAP04437 139 aa12.58□□□□□ -0.4
COMMD4-215ENST00000566843 PVRIGQ6DKI7 326 aa12.58□□□□□ -0.4
COMMD4-215ENST00000566843 TMUB1Q9BVT8 246 aa12.58□□□□□ -0.4
COMMD4-215ENST00000566843 CACNA1GO43497 2377 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms