RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 RNASE4P34096 147 aaKnown RBP1.14□□□□□ -2.23
LINC00557-201ENST00000563184 MRPS25P82663 173 aaKnown RBP1.14□□□□□ -2.23
LINC00557-201ENST00000563184 FADDQ13158 208 aa1.14□□□□□ -2.23
LINC00557-201ENST00000563184 ESRGQ1W209 222 aa1.14□□□□□ -2.23
LINC00557-201ENST00000563184 SIGMAR1Q99720 223 aa1.14□□□□□ -2.23
LINC00557-201ENST00000563184 ACER3Q9NUN7 267 aa1.14□□□□□ -2.23
LINC00557-201ENST00000563184 ARHGEF28Q8N1W1 1705 aaKnown RBP1.14□□□□□ -2.23
LINC00557-201ENST00000563184 OBSL1O75147 1896 aa1.14□□□□□ -2.23
LINC00557-201ENST00000563184 RTL1A6NKG5 1358 aa1.13□□□□□ -2.23
LINC00557-201ENST00000563184 HOXA6P31267 233 aa1.13□□□□□ -2.23
LINC00557-201ENST00000563184 AP3S2P59780 193 aa1.13□□□□□ -2.23
LINC00557-201ENST00000563184 CHMP6Q96FZ7 201 aa1.13□□□□□ -2.23
LINC00557-201ENST00000563184 PSTPIP2Q9H939 334 aa1.13□□□□□ -2.23
LINC00557-201ENST00000563184 MYH10P35580 1976 aa1.13□□□□□ -2.23
LINC00557-201ENST00000563184 FBN2P35556 2912 aa1.13□□□□□ -2.23
LINC00557-201ENST00000563184 INE1O15225 51 aa1.12□□□□□ -2.23
LINC00557-201ENST00000563184 CYB5BO43169 146 aa1.12□□□□□ -2.23
LINC00557-201ENST00000563184 ATP5HO75947 161 aa1.12□□□□□ -2.23
LINC00557-201ENST00000563184 OR7C1O76099 320 aaPredicted RBP1.12□□□□□ -2.23
LINC00557-201ENST00000563184 BCL2L10Q9HD36 194 aa1.12□□□□□ -2.23
LINC00557-201ENST00000563184 KIF1BO60333 1816 aa1.12□□□□□ -2.23
LINC00557-201ENST00000563184 EML5Q05BV3 1969 aa1.12□□□□□ -2.23
LINC00557-201ENST00000563184 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
LINC00557-201ENST00000563184 CLDN25C9JDP6 229 aa1.11□□□□□ -2.23
LINC00557-201ENST00000563184 SNRNP200O75643 2136 aaKnown RBP1.11□□□□□ -2.23
LINC00557-201ENST00000563184 SPA17Q15506 151 aa1.11□□□□□ -2.23
LINC00557-201ENST00000563184 KRTAP5-10Q6L8G5 202 aa1.11□□□□□ -2.23
LINC00557-201ENST00000563184 LINC00301Q8NCQ3 95 aa1.11□□□□□ -2.23
LINC00557-201ENST00000563184 ANP32BQ92688 251 aaKnown RBP1.11□□□□□ -2.23
LINC00557-201ENST00000563184 ITFG2Q969R8 447 aa1.11□□□□□ -2.23
LINC00557-201ENST00000563184 SLAMF6Q96DU3 332 aa1.11□□□□□ -2.23
LINC00557-201ENST00000563184 RIMBP3CA6NJZ7 1639 aa1.11□□□□□ -2.23
LINC00557-201ENST00000563184 RIMBP3BA6NNM3 1639 aa1.11□□□□□ -2.23
LINC00557-201ENST00000563184 RIMBP3Q9UFD9 1639 aa1.11□□□□□ -2.23
LINC00557-201ENST00000563184 ZNF469Q96JG9 3925 aaPredicted RBP1.1□□□□□ -2.23
LINC00557-201ENST00000563184 TRAV4A0A0B4J268 109 aa1.1□□□□□ -2.23
LINC00557-201ENST00000563184 ZNF736B4DX44 427 aaPredicted RBP1.1□□□□□ -2.23
LINC00557-201ENST00000563184 S100A5P33763 92 aa1.1□□□□□ -2.23
LINC00557-201ENST00000563184 SERPINB9P50453 376 aa1.1□□□□□ -2.23
LINC00557-201ENST00000563184 RHOBP62745 196 aa1.1□□□□□ -2.23
LINC00557-201ENST00000563184 DYNLT1P63172 113 aa1.1□□□□□ -2.23
LINC00557-201ENST00000563184 REEP5Q00765 189 aa1.1□□□□□ -2.23
LINC00557-201ENST00000563184 GDF5OSQ5U4N7 250 aa1.1□□□□□ -2.23
LINC00557-201ENST00000563184 TEX261Q6UWH6 196 aa1.1□□□□□ -2.23
LINC00557-201ENST00000563184 Q8IYB0 196 aa1.1□□□□□ -2.23
LINC00557-201ENST00000563184 CLECL1Q8IZS7 167 aa1.1□□□□□ -2.23
LINC00557-201ENST00000563184 STAG3L4Q8TBR4 150 aa1.1□□□□□ -2.23
LINC00557-201ENST00000563184 FAM172AQ8WUF8 416 aa1.1□□□□□ -2.23
LINC00557-201ENST00000563184 CCDC94Q9BW85 323 aaPredicted RBP1.1□□□□□ -2.23
LINC00557-201ENST00000563184 RASL12Q9NYN1 266 aa1.1□□□□□ -2.23
LINC00557-201ENST00000563184 U3KQ87 197 aa1.1□□□□□ -2.23
LINC00557-201ENST00000563184 LAMB4A4D0S4 1761 aa1.1□□□□□ -2.23
LINC00557-201ENST00000563184 NOTCH1P46531 2555 aa1.09□□□□□ -2.23
LINC00557-201ENST00000563184 J3QRK9 145 aa1.09□□□□□ -2.23
LINC00557-201ENST00000563184 CYBAP13498 195 aa1.09□□□□□ -2.23
LINC00557-201ENST00000563184 ARF6P62330 175 aa1.09□□□□□ -2.23
LINC00557-201ENST00000563184 BASP1P80723 227 aaKnown RBP1.09□□□□□ -2.23
LINC00557-201ENST00000563184 TMED2Q15363 201 aa1.09□□□□□ -2.23
LINC00557-201ENST00000563184 OR11H6Q8NGC7 330 aa1.09□□□□□ -2.23
LINC00557-201ENST00000563184 OR2T10Q8NGZ9 312 aa1.09□□□□□ -2.23
LINC00557-201ENST00000563184 PRADC1Q9BSG0 188 aa1.09□□□□□ -2.23
LINC00557-201ENST00000563184 KIFC1Q9BW19 673 aa1.09□□□□□ -2.23
LINC00557-201ENST00000563184 PARVBQ9HBI1 364 aa1.09□□□□□ -2.23
LINC00557-201ENST00000563184 CDC42SE1Q9NRR8 79 aa1.09□□□□□ -2.23
LINC00557-201ENST00000563184 CCDC160A6NGH7 325 aa1.08□□□□□ -2.24
LINC00557-201ENST00000563184 FAM159BA6NKW6 160 aa1.08□□□□□ -2.24
LINC00557-201ENST00000563184 GADD45GO95257 159 aa1.08□□□□□ -2.24
LINC00557-201ENST00000563184 IFNA6P05013 189 aa1.08□□□□□ -2.24
LINC00557-201ENST00000563184 PIGPP57054 158 aa1.08□□□□□ -2.24
LINC00557-201ENST00000563184 SOSTDC1Q6X4U4 206 aa1.08□□□□□ -2.24
LINC00557-201ENST00000563184 TEX47Q8TBZ9 253 aa1.08□□□□□ -2.24
LINC00557-201ENST00000563184 GNPDA2Q8TDQ7 276 aa1.08□□□□□ -2.24
LINC00557-201ENST00000563184 HEATR1Q9H583 2144 aaKnown RBP1.08□□□□□ -2.24
LINC00557-201ENST00000563184 NMNAT1Q9HAN9 279 aaPredicted RBP1.08□□□□□ -2.24
LINC00557-201ENST00000563184 C14orf132Q9NPU4 83 aa1.08□□□□□ -2.24
LINC00557-201ENST00000563184 KIAA1549Q9HCM3 1950 aa1.08□□□□□ -2.24
LINC00557-201ENST00000563184 CASP8AP2Q9UKL3 1982 aa1.07□□□□□ -2.24
LINC00557-201ENST00000563184 ZNF25P17030 456 aaPredicted RBP1.07□□□□□ -2.24
LINC00557-201ENST00000563184 ERP29P30040 261 aaKnown RBP1.07□□□□□ -2.24
LINC00557-201ENST00000563184 EIF5AP63241 154 aaKnown RBP1.07□□□□□ -2.24
LINC00557-201ENST00000563184 LIN52Q52LA3 116 aa1.07□□□□□ -2.24
LINC00557-201ENST00000563184 SLC30A7Q8NEW0 376 aa1.07□□□□□ -2.24
LINC00557-201ENST00000563184 BTF3L4Q96K17 158 aa1.07□□□□□ -2.24
LINC00557-201ENST00000563184 C6orf62Q9GZU0 229 aaPredicted RBP1.07□□□□□ -2.24
LINC00557-201ENST00000563184 TMEM126AQ9H061 195 aa1.07□□□□□ -2.24
LINC00557-201ENST00000563184 CHCHD2Q9Y6H1 151 aaPredicted RBP1.07□□□□□ -2.24
LINC00557-201ENST00000563184 PCF11O94913 1555 aaKnown RBP1.07□□□□□ -2.24
LINC00557-201ENST00000563184 LAMA4Q16363 1823 aa1.06□□□□□ -2.24
LINC00557-201ENST00000563184 CST2P09228 141 aa1.06□□□□□ -2.24
LINC00557-201ENST00000563184 HSD11B1P28845 292 aa1.06□□□□□ -2.24
LINC00557-201ENST00000563184 RRN3P1Q2M238 152 aa1.06□□□□□ -2.24
LINC00557-201ENST00000563184 LYRM7Q5U5X0 104 aa1.06□□□□□ -2.24
LINC00557-201ENST00000563184 DGCR14Q96DF8 476 aaKnown RBP1.06□□□□□ -2.24
LINC00557-201ENST00000563184 ARL2BPQ9Y2Y0 163 aa1.06□□□□□ -2.24
LINC00557-201ENST00000563184 TRBV19A0A075B6N1 114 aa1.05□□□□□ -2.24
LINC00557-201ENST00000563184 DHFRP00374 187 aa1.05□□□□□ -2.24
LINC00557-201ENST00000563184 ATP5G3P48201 142 aa1.05□□□□□ -2.24
LINC00557-201ENST00000563184 VBP1P61758 197 aa1.05□□□□□ -2.24
LINC00557-201ENST00000563184 KRR1Q13601 381 aaKnown RBP1.05□□□□□ -2.24
LINC00557-201ENST00000563184 MPV17LQ2QL34 196 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms