RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 SCO2A0A1W2PP80 73 aa5.41□□□□□ -1.54
TSPAN3-209ENST00000560715 C9JCJ5 164 aa5.41□□□□□ -1.54
TSPAN3-209ENST00000560715 SPINK4O60575 86 aa5.41□□□□□ -1.54
TSPAN3-209ENST00000560715 ZNF121P58317 390 aaPredicted RBP5.41□□□□□ -1.54
TSPAN3-209ENST00000560715 PRSS41Q7RTY9 318 aa5.41□□□□□ -1.54
TSPAN3-209ENST00000560715 CLDN23Q96B33 292 aa5.41□□□□□ -1.54
TSPAN3-209ENST00000560715 MLST8Q9BVC4 326 aa5.41□□□□□ -1.54
TSPAN3-209ENST00000560715 DOCK11Q5JSL3 2073 aa5.41□□□□□ -1.54
TSPAN3-209ENST00000560715 PHF3Q92576 2039 aaKnown RBP5.41□□□□□ -1.54
TSPAN3-209ENST00000560715 PRUNE2Q8WUY3 3088 aa5.41□□□□□ -1.54
TSPAN3-209ENST00000560715 ZNHIT1O43257 154 aa5.41□□□□□ -1.54
TSPAN3-209ENST00000560715 IGHG3P01860 377 aa5.41□□□□□ -1.54
TSPAN3-209ENST00000560715 CD38P28907 300 aa5.41□□□□□ -1.54
TSPAN3-209ENST00000560715 SLURP1P55000 103 aa5.41□□□□□ -1.54
TSPAN3-209ENST00000560715 FOXG1P55316 489 aaPredicted RBP5.41□□□□□ -1.54
TSPAN3-209ENST00000560715 SRSF6Q13247 344 aaKnown RBP5.41□□□□□ -1.54
TSPAN3-209ENST00000560715 ZNF585BQ52M93 769 aa5.41□□□□□ -1.54
TSPAN3-209ENST00000560715 SPANXN5Q5MJ07 72 aa5.41□□□□□ -1.54
TSPAN3-209ENST00000560715 SMIM20Q8N5G0 67 aa5.41□□□□□ -1.54
TSPAN3-209ENST00000560715 C11orf21Q9P2W6 132 aa5.41□□□□□ -1.54
TSPAN3-209ENST00000560715 FREM3P0C091 2139 aa5.4□□□□□ -1.54
TSPAN3-209ENST00000560715 IGKV1D-43A0A0B4J1Z2 117 aa5.4□□□□□ -1.54
TSPAN3-209ENST00000560715 F8W1H4 67 aa5.4□□□□□ -1.54
TSPAN3-209ENST00000560715 OR9G9P0C7N8 305 aa5.4□□□□□ -1.54
TSPAN3-209ENST00000560715 PSG2P11465 335 aa5.4□□□□□ -1.54
TSPAN3-209ENST00000560715 HOXD3P31249 432 aaPredicted RBP5.4□□□□□ -1.54
TSPAN3-209ENST00000560715 PPP1CAP62136 330 aa5.4□□□□□ -1.54
TSPAN3-209ENST00000560715 MFAP5Q13361 173 aa5.4□□□□□ -1.54
TSPAN3-209ENST00000560715 NNATQ16517 81 aa5.4□□□□□ -1.54
TSPAN3-209ENST00000560715 TMEM14EPQ6UXP3 125 aa5.4□□□□□ -1.54
TSPAN3-209ENST00000560715 TTC9CQ8N5M4 171 aa5.4□□□□□ -1.54
TSPAN3-209ENST00000560715 OR10X1Q8NGY0 326 aa5.4□□□□□ -1.54
TSPAN3-209ENST00000560715 OR10D3Q8NH80 312 aa5.4□□□□□ -1.54
TSPAN3-209ENST00000560715 TMEM147Q9BVK8 224 aa5.4□□□□□ -1.54
TSPAN3-209ENST00000560715 ZNF391Q9UJN7 358 aa5.4□□□□□ -1.54
TSPAN3-209ENST00000560715 HSPB8Q9UJY1 196 aa5.4□□□□□ -1.54
TSPAN3-209ENST00000560715 UFC1Q9Y3C8 167 aa5.4□□□□□ -1.54
TSPAN3-209ENST00000560715 BRWD1Q9NSI6 2320 aa5.4□□□□□ -1.54
TSPAN3-209ENST00000560715 CACNA1IQ9P0X4 2223 aa5.4□□□□□ -1.55
TSPAN3-209ENST00000560715 ANGPTL7O43827 346 aa5.4□□□□□ -1.55
TSPAN3-209ENST00000560715 RPL31P62899 125 aaKnown RBP5.4□□□□□ -1.55
TSPAN3-209ENST00000560715 FAM162BQ5T6X4 162 aa5.4□□□□□ -1.55
TSPAN3-209ENST00000560715 Q6ZVQ6 151 aa5.4□□□□□ -1.55
TSPAN3-209ENST00000560715 C17orf82Q86X59 251 aaPredicted RBP5.4□□□□□ -1.55
TSPAN3-209ENST00000560715 TMEM219Q86XT9 240 aa5.4□□□□□ -1.55
TSPAN3-209ENST00000560715 VGLL1Q99990 258 aa5.4□□□□□ -1.55
TSPAN3-209ENST00000560715 NPCDR1Q9BY65 106 aa5.4□□□□□ -1.55
TSPAN3-209ENST00000560715 CYSLTR1Q9Y271 337 aa5.4□□□□□ -1.55
TSPAN3-209ENST00000560715 SPINK8P0C7L1 97 aa5.39□□□□□ -1.55
TSPAN3-209ENST00000560715 OR1D4P47884 311 aa5.39□□□□□ -1.55
TSPAN3-209ENST00000560715 TCL1AP56279 114 aa5.39□□□□□ -1.55
TSPAN3-209ENST00000560715 IGLV3-21P80748 117 aaPredicted RBP5.39□□□□□ -1.55
TSPAN3-209ENST00000560715 ATP5G2Q06055 141 aa5.39□□□□□ -1.55
TSPAN3-209ENST00000560715 RASL11AQ6T310 242 aa5.39□□□□□ -1.55
TSPAN3-209ENST00000560715 Q6ZPA2 131 aa5.39□□□□□ -1.55
TSPAN3-209ENST00000560715 RAB37Q96AX2 223 aa5.39□□□□□ -1.55
TSPAN3-209ENST00000560715 TMEM204Q9BSN7 226 aa5.39□□□□□ -1.55
TSPAN3-209ENST00000560715 CACNG5Q9UF02 275 aa5.39□□□□□ -1.55
TSPAN3-209ENST00000560715 HILPDAQ9Y5L2 63 aa5.39□□□□□ -1.55
TSPAN3-209ENST00000560715 TRGV10A0A0A0MS01 117 aa5.39□□□□□ -1.55
TSPAN3-209ENST00000560715 SMIM27A0A1W2PRY6 76 aa5.39□□□□□ -1.55
TSPAN3-209ENST00000560715 CD300LBA8K4G0 201 aa5.39□□□□□ -1.55
TSPAN3-209ENST00000560715 PGLYRP1O75594 196 aaPredicted RBP5.39□□□□□ -1.55
TSPAN3-209ENST00000560715 NGFP01138 241 aa5.39□□□□□ -1.55
TSPAN3-209ENST00000560715 EGR2P11161 476 aaPredicted RBP5.39□□□□□ -1.55
TSPAN3-209ENST00000560715 DEFA4P12838 97 aa5.39□□□□□ -1.55
TSPAN3-209ENST00000560715 GATA1P15976 413 aaPredicted RBP5.39□□□□□ -1.55
TSPAN3-209ENST00000560715 IZUMO4Q1ZYL8 232 aa5.39□□□□□ -1.55
TSPAN3-209ENST00000560715 DEFB110Q30KQ9 67 aa5.39□□□□□ -1.55
TSPAN3-209ENST00000560715 Q6ZS49 121 aa5.39□□□□□ -1.55
TSPAN3-209ENST00000560715 PP6455Q8WZ26 134 aa5.39□□□□□ -1.55
TSPAN3-209ENST00000560715 H1FXQ92522 213 aaKnown RBP5.39□□□□□ -1.55
TSPAN3-209ENST00000560715 NDFIP1Q9BT67 221 aa5.39□□□□□ -1.55
TSPAN3-209ENST00000560715 GGTLC1Q9BX51 225 aa5.39□□□□□ -1.55
TSPAN3-209ENST00000560715 hCG_38984A0A1B0GV85 526 aa5.38□□□□□ -1.55
TSPAN3-209ENST00000560715 TMEM213A2RRL7 107 aa5.38□□□□□ -1.55
TSPAN3-209ENST00000560715 CXCL13O43927 109 aa5.38□□□□□ -1.55
TSPAN3-209ENST00000560715 OR7C1O76099 320 aaPredicted RBP5.38□□□□□ -1.55
TSPAN3-209ENST00000560715 FGF6P10767 208 aa5.38□□□□□ -1.55
TSPAN3-209ENST00000560715 F2RP25116 425 aa5.38□□□□□ -1.55
TSPAN3-209ENST00000560715 CEACAM16Q2WEN9 425 aa5.38□□□□□ -1.55
TSPAN3-209ENST00000560715 MOB1BQ7L9L4 216 aa5.38□□□□□ -1.55
TSPAN3-209ENST00000560715 OR1L1Q8NH94 360 aa5.38□□□□□ -1.55
TSPAN3-209ENST00000560715 DLX4Q92988 240 aaPredicted RBP5.38□□□□□ -1.55
TSPAN3-209ENST00000560715 C11orf52Q96A22 123 aa5.38□□□□□ -1.55
TSPAN3-209ENST00000560715 BBC3Q96PG8 261 aaPredicted RBP5.38□□□□□ -1.55
TSPAN3-209ENST00000560715 FOXC2Q99958 501 aa5.38□□□□□ -1.55
TSPAN3-209ENST00000560715 ANAPC13Q9BS18 74 aa5.38□□□□□ -1.55
TSPAN3-209ENST00000560715 ZNF331Q9NQX6 463 aaPredicted RBP5.38□□□□□ -1.55
TSPAN3-209ENST00000560715 OSTCQ9NRP0 149 aa5.38□□□□□ -1.55
TSPAN3-209ENST00000560715 RABAC1Q9UI14 185 aa5.38□□□□□ -1.55
TSPAN3-209ENST00000560715 ARID1BQ8NFD5 2236 aaPredicted RBP5.38□□□□□ -1.55
TSPAN3-209ENST00000560715 IGKV1D-13A0A0B4J2D9 117 aa5.38□□□□□ -1.55
TSPAN3-209ENST00000560715 IZUMO1RA6ND01 250 aa5.38□□□□□ -1.55
TSPAN3-209ENST00000560715 K7EMT4 169 aa5.38□□□□□ -1.55
TSPAN3-209ENST00000560715 LEPROTL1O95214 131 aa5.38□□□□□ -1.55
TSPAN3-209ENST00000560715 IGLV3-1P01715 115 aa5.38□□□□□ -1.55
TSPAN3-209ENST00000560715 IGHV4-31P0DP07 118 aa5.38□□□□□ -1.55
TSPAN3-209ENST00000560715 IGKV1-13P0DP09 117 aa5.38□□□□□ -1.55
TSPAN3-209ENST00000560715 TFF3Q07654 80 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms