RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 ACANP16112 2415 aa11.22□□□□□ -0.61
ARHGEF40-208ENST00000557498 FAM78BQ5VT40 261 aa11.22□□□□□ -0.61
ARHGEF40-208ENST00000557498 LCNL1Q6ZST4 164 aa11.22□□□□□ -0.61
ARHGEF40-208ENST00000557498 COMMD1Q8N668 190 aa11.22□□□□□ -0.61
ARHGEF40-208ENST00000557498 OR51G1Q8NGK1 321 aa11.22□□□□□ -0.61
ARHGEF40-208ENST00000557498 OR1B1Q8NGR6 318 aa11.22□□□□□ -0.61
ARHGEF40-208ENST00000557498 Q8WTZ3 238 aa11.22□□□□□ -0.61
ARHGEF40-208ENST00000557498 TMEM37Q8WXS4 190 aa11.22□□□□□ -0.61
ARHGEF40-208ENST00000557498 CHRDL1Q9BU40 450 aa11.22□□□□□ -0.61
ARHGEF40-208ENST00000557498 TEX15Q9BXT5 2789 aa11.22□□□□□ -0.61
ARHGEF40-208ENST00000557498 MRPL32Q9BYC8 188 aaKnown RBP11.22□□□□□ -0.61
ARHGEF40-208ENST00000557498 DNAJC4Q9NNZ3 241 aa11.22□□□□□ -0.61
ARHGEF40-208ENST00000557498 FUT9Q9Y231 359 aa11.22□□□□□ -0.61
ARHGEF40-208ENST00000557498 ELOA3CA0A087WX78 387 aaPredicted RBP11.21□□□□□ -0.61
ARHGEF40-208ENST00000557498 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.21□□□□□ -0.61
ARHGEF40-208ENST00000557498 HMGB3O15347 200 aaKnown RBP11.21□□□□□ -0.61
ARHGEF40-208ENST00000557498 TGOLN2O43493 480 aa11.21□□□□□ -0.61
ARHGEF40-208ENST00000557498 TCF21O43680 179 aa11.21□□□□□ -0.61
ARHGEF40-208ENST00000557498 OR2C1O95371 312 aa11.21□□□□□ -0.61
ARHGEF40-208ENST00000557498 CLEC3BP05452 202 aa11.21□□□□□ -0.61
ARHGEF40-208ENST00000557498 ORM2P19652 201 aa11.21□□□□□ -0.61
ARHGEF40-208ENST00000557498 ADMP35318 185 aa11.21□□□□□ -0.61
ARHGEF40-208ENST00000557498 FGF8P55075 233 aaPredicted RBP11.21□□□□□ -0.61
ARHGEF40-208ENST00000557498 LYZP61626 148 aa11.21□□□□□ -0.61
ARHGEF40-208ENST00000557498 C10orf113Q5VZT2 155 aa11.21□□□□□ -0.61
ARHGEF40-208ENST00000557498 SPATA31B1PQ5VZV4 182 aa11.21□□□□□ -0.61
ARHGEF40-208ENST00000557498 ZNF343Q6P1L6 599 aa11.21□□□□□ -0.61
ARHGEF40-208ENST00000557498 PATE2Q6UY27 113 aa11.21□□□□□ -0.61
ARHGEF40-208ENST00000557498 ZNF600Q6ZNG1 722 aa11.21□□□□□ -0.61
ARHGEF40-208ENST00000557498 MIR17HGQ75NE6 70 aa11.21□□□□□ -0.61
ARHGEF40-208ENST00000557498 RNF152Q8N8N0 203 aa11.21□□□□□ -0.61
ARHGEF40-208ENST00000557498 MYOZ3Q8TDC0 251 aa11.21□□□□□ -0.61
ARHGEF40-208ENST00000557498 MARC2Q969Z3 335 aa11.21□□□□□ -0.61
ARHGEF40-208ENST00000557498 C16orf95Q9H693 158 aa11.21□□□□□ -0.61
ARHGEF40-208ENST00000557498 SEPSECSQ9HD40 501 aaKnown RBP11.21□□□□□ -0.61
ARHGEF40-208ENST00000557498 ZFHX3Q15911 3703 aa11.2□□□□□ -0.62
ARHGEF40-208ENST00000557498 WI2-2373I1.2A0A1W2PRP0 233 aa11.2□□□□□ -0.62
ARHGEF40-208ENST00000557498 HYPMO75409 117 aa11.2□□□□□ -0.62
ARHGEF40-208ENST00000557498 NDUFA7O95182 113 aa11.2□□□□□ -0.62
ARHGEF40-208ENST00000557498 IGHV3-11P01762 117 aa11.2□□□□□ -0.62
ARHGEF40-208ENST00000557498 STAG3L2P0CL84 134 aa11.2□□□□□ -0.62
ARHGEF40-208ENST00000557498 STAG3L3P0CL85 134 aa11.2□□□□□ -0.62
ARHGEF40-208ENST00000557498 CCL20P78556 96 aa11.2□□□□□ -0.62
ARHGEF40-208ENST00000557498 KIAA0141Q14154 515 aaPredicted RBP11.2□□□□□ -0.62
ARHGEF40-208ENST00000557498 FAM209BQ5JX69 171 aa11.2□□□□□ -0.62
ARHGEF40-208ENST00000557498 ZNF491Q8N8L2 437 aa11.2□□□□□ -0.62
ARHGEF40-208ENST00000557498 RNF125Q96EQ8 232 aa11.2□□□□□ -0.62
ARHGEF40-208ENST00000557498 ZNF414Q96IQ9 312 aa11.2□□□□□ -0.62
ARHGEF40-208ENST00000557498 GNB4Q9HAV0 340 aa11.2□□□□□ -0.62
ARHGEF40-208ENST00000557498 RAB19A4D1S5 217 aa11.19□□□□□ -0.62
ARHGEF40-208ENST00000557498 IL4P05112 153 aa11.19□□□□□ -0.62
ARHGEF40-208ENST00000557498 RPLP1P05386 114 aaKnown RBP11.19□□□□□ -0.62
ARHGEF40-208ENST00000557498 ARL3P36405 182 aa11.19□□□□□ -0.62
ARHGEF40-208ENST00000557498 RELQ04864 619 aaPredicted RBP11.19□□□□□ -0.62
ARHGEF40-208ENST00000557498 KLHDC1Q8N7A1 406 aa11.19□□□□□ -0.62
ARHGEF40-208ENST00000557498 OR4X2Q8NGF9 303 aa11.19□□□□□ -0.62
ARHGEF40-208ENST00000557498 PBDC1Q9BVG4 233 aa11.19□□□□□ -0.62
ARHGEF40-208ENST00000557498 TECRQ9NZ01 308 aaKnown RBP11.19□□□□□ -0.62
ARHGEF40-208ENST00000557498 HIGD1AQ9Y241 93 aa11.19□□□□□ -0.62
ARHGEF40-208ENST00000557498 PUS1Q9Y606 427 aaKnown RBP eCLIP11.19□□□□□ -0.62
ARHGEF40-208ENST00000557498 SONP18583 2426 aaKnown RBP11.19□□□□□ -0.62
ARHGEF40-208ENST00000557498 HIVEP2P31629 2446 aa11.19□□□□□ -0.62
ARHGEF40-208ENST00000557498 CELSR1Q9NYQ6 3014 aa11.19□□□□□ -0.62
ARHGEF40-208ENST00000557498 NOTCH2Q04721 2471 aa11.18□□□□□ -0.62
ARHGEF40-208ENST00000557498 BAHCC1Q9P281 2608 aa11.18□□□□□ -0.62
ARHGEF40-208ENST00000557498 PPP5D1E7EU14 171 aa11.18□□□□□ -0.62
ARHGEF40-208ENST00000557498 ATP6V1G1O75348 118 aa11.18□□□□□ -0.62
ARHGEF40-208ENST00000557498 CXorf1O96002 111 aa11.18□□□□□ -0.62
ARHGEF40-208ENST00000557498 TRBV12-3P01733 135 aa11.18□□□□□ -0.62
ARHGEF40-208ENST00000557498 ARL14EPLP0DKL9 152 aa11.18□□□□□ -0.62
ARHGEF40-208ENST00000557498 C8orf88P0DMB2 117 aa11.18□□□□□ -0.62
ARHGEF40-208ENST00000557498 TAS2R45P59539 299 aa11.18□□□□□ -0.62
ARHGEF40-208ENST00000557498 USF2Q15853 346 aaPredicted RBP11.18□□□□□ -0.62
ARHGEF40-208ENST00000557498 KHDC3LQ587J8 217 aa11.18□□□□□ -0.62
ARHGEF40-208ENST00000557498 MORN5Q5VZ52 161 aa11.18□□□□□ -0.62
ARHGEF40-208ENST00000557498 LINC00305Q7Z4B0 112 aa11.18□□□□□ -0.62
ARHGEF40-208ENST00000557498 EIF4E3Q8N5X7 224 aaKnown RBP11.18□□□□□ -0.62
ARHGEF40-208ENST00000557498 FAM210AQ96ND0 272 aa11.18□□□□□ -0.62
ARHGEF40-208ENST00000557498 UHRF2Q96PU4 802 aa11.18□□□□□ -0.62
ARHGEF40-208ENST00000557498 MRPL27Q9P0M9 148 aaKnown RBP11.18□□□□□ -0.62
ARHGEF40-208ENST00000557498 TLN2Q9Y4G6 2542 aa11.18□□□□□ -0.62
ARHGEF40-208ENST00000557498 ANKRD34BA5PLL1 514 aa11.17□□□□□ -0.62
ARHGEF40-208ENST00000557498 UQCC3Q6UW78 93 aa11.17□□□□□ -0.62
ARHGEF40-208ENST00000557498 TOMM20LQ6UXN7 152 aa11.17□□□□□ -0.62
ARHGEF40-208ENST00000557498 IQCF2Q8IXL9 164 aa11.17□□□□□ -0.62
ARHGEF40-208ENST00000557498 OR5AU1Q8NGC0 362 aa11.17□□□□□ -0.62
ARHGEF40-208ENST00000557498 LINC01006Q8NI28 216 aa11.17□□□□□ -0.62
ARHGEF40-208ENST00000557498 WIPF2Q8TF74 440 aaPredicted RBP11.17□□□□□ -0.62
ARHGEF40-208ENST00000557498 FAM167A-AS1Q96KT0 104 aa11.17□□□□□ -0.62
ARHGEF40-208ENST00000557498 CITED4Q96RK1 184 aa11.17□□□□□ -0.62
ARHGEF40-208ENST00000557498 SLC25A2Q9BXI2 301 aa11.17□□□□□ -0.62
ARHGEF40-208ENST00000557498 ZFAND3Q9H8U3 227 aa11.17□□□□□ -0.62
ARHGEF40-208ENST00000557498 OTOGQ6ZRI0 2925 aa11.16□□□□□ -0.62
ARHGEF40-208ENST00000557498 TRAV5A0A0B4J249 113 aa11.16□□□□□ -0.62
ARHGEF40-208ENST00000557498 IGHV3-35A0A0C4DH35 117 aa11.16□□□□□ -0.62
ARHGEF40-208ENST00000557498 H3BRN7 92 aa11.16□□□□□ -0.62
ARHGEF40-208ENST00000557498 BMPR1BO00238 502 aa11.16□□□□□ -0.62
ARHGEF40-208ENST00000557498 IFNA1P01562 189 aa11.16□□□□□ -0.62
ARHGEF40-208ENST00000557498 LGALS1P09382 135 aaKnown RBP11.16□□□□□ -0.62
ARHGEF40-208ENST00000557498 GCHFRP30047 84 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms