RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 C1orf194Q5T5A4 169 aa11.54□□□□□ -0.56
VTI1B-204ENST00000554659 TMEM42Q69YG0 159 aa11.54□□□□□ -0.56
VTI1B-204ENST00000554659 GLMPQ8WWB7 406 aa11.54□□□□□ -0.56
VTI1B-204ENST00000554659 LY96Q9Y6Y9 160 aa11.54□□□□□ -0.56
VTI1B-204ENST00000554659 EVI2AP22794 236 aa11.54□□□□□ -0.56
VTI1B-204ENST00000554659 FOXF2Q12947 444 aa11.54□□□□□ -0.56
VTI1B-204ENST00000554659 TRIOBPQ9H2D6 2365 aa11.54□□□□□ -0.56
VTI1B-204ENST00000554659 SRRM5B3KS81 715 aa11.54□□□□□ -0.56
VTI1B-204ENST00000554659 CHTOPQ9Y3Y2 248 aaKnown RBP11.54□□□□□ -0.56
VTI1B-204ENST00000554659 SPTBN1Q01082 2364 aaKnown RBP11.54□□□□□ -0.56
VTI1B-204ENST00000554659 C17orf82Q86X59 251 aaPredicted RBP11.54□□□□□ -0.56
VTI1B-204ENST00000554659 YAE1D1Q9NRH1 226 aa11.54□□□□□ -0.56
VTI1B-204ENST00000554659 IGHV3-11P01762 117 aa11.53□□□□□ -0.56
VTI1B-204ENST00000554659 HTN3P15516 51 aa11.53□□□□□ -0.56
VTI1B-204ENST00000554659 MESP1Q9BRJ9 268 aa11.53□□□□□ -0.56
VTI1B-204ENST00000554659 SPRR3Q9UBC9 169 aa11.53□□□□□ -0.56
VTI1B-204ENST00000554659 RPUSD1Q9UJJ7 312 aaKnown RBP11.53□□□□□ -0.56
VTI1B-204ENST00000554659 GGTLC3B5MD39 225 aa11.53□□□□□ -0.56
VTI1B-204ENST00000554659 CD300EQ496F6 205 aaPredicted RBP11.53□□□□□ -0.56
VTI1B-204ENST00000554659 Q6ZS49 121 aa11.53□□□□□ -0.56
VTI1B-204ENST00000554659 TET1Q8NFU7 2136 aa11.53□□□□□ -0.56
VTI1B-204ENST00000554659 CFPP27918 469 aa11.53□□□□□ -0.56
VTI1B-204ENST00000554659 LINC01559Q495D7 138 aa11.53□□□□□ -0.56
VTI1B-204ENST00000554659 ORMDL2Q53FV1 153 aa11.53□□□□□ -0.56
VTI1B-204ENST00000554659 MALP21145 153 aa11.53□□□□□ -0.56
VTI1B-204ENST00000554659 SLC25A48Q6ZT89 311 aaKnown RBP11.53□□□□□ -0.56
VTI1B-204ENST00000554659 F2Z2F3 143 aa11.52□□□□□ -0.56
VTI1B-204ENST00000554659 NTN3O00634 580 aaPredicted RBP11.52□□□□□ -0.56
VTI1B-204ENST00000554659 SLC25A2Q9BXI2 301 aa11.52□□□□□ -0.56
VTI1B-204ENST00000554659 SEPSECSQ9HD40 501 aaKnown RBP11.52□□□□□ -0.56
VTI1B-204ENST00000554659 HGFACQ04756 655 aa11.52□□□□□ -0.57
VTI1B-204ENST00000554659 MGST2Q99735 147 aa11.52□□□□□ -0.57
VTI1B-204ENST00000554659 PRDM6Q9NQX0 595 aa11.52□□□□□ -0.57
VTI1B-204ENST00000554659 IGHV3-64A0A075B6Q5 118 aa11.52□□□□□ -0.57
VTI1B-204ENST00000554659 DLEU1O43261 78 aa11.52□□□□□ -0.57
VTI1B-204ENST00000554659 PRTN3P24158 256 aa11.52□□□□□ -0.57
VTI1B-204ENST00000554659 ATXN8Q156A1 80 aa11.52□□□□□ -0.57
VTI1B-204ENST00000554659 ZFAND6Q6FIF0 208 aa11.52□□□□□ -0.57
VTI1B-204ENST00000554659 ERG28Q9UKR5 140 aa11.52□□□□□ -0.57
VTI1B-204ENST00000554659 TRAV5A0A0B4J249 113 aa11.51□□□□□ -0.57
VTI1B-204ENST00000554659 ARHGEF17Q96PE2 2063 aaPredicted RBP11.51□□□□□ -0.57
VTI1B-204ENST00000554659 IGHV1-46P01743 117 aa11.51□□□□□ -0.57
VTI1B-204ENST00000554659 ERVK11-1P61568 191 aa11.51□□□□□ -0.57
VTI1B-204ENST00000554659 ABHD17AQ96GS6 310 aa11.51□□□□□ -0.57
VTI1B-204ENST00000554659 SPATA31B1PQ5VZV4 182 aa11.51□□□□□ -0.57
VTI1B-204ENST00000554659 OR10W1Q8NGF6 305 aa11.51□□□□□ -0.57
VTI1B-204ENST00000554659 CRIM1Q9NZV1 1036 aa11.51□□□□□ -0.57
VTI1B-204ENST00000554659 SMPXQ9UHP9 88 aa11.51□□□□□ -0.57
VTI1B-204ENST00000554659 LTBP1Q14766 1721 aa11.51□□□□□ -0.57
VTI1B-204ENST00000554659 INTS1Q8N201 2190 aaKnown RBP11.51□□□□□ -0.57
VTI1B-204ENST00000554659 PSPNO60542 156 aa11.51□□□□□ -0.57
VTI1B-204ENST00000554659 CD28P10747 220 aa11.51□□□□□ -0.57
VTI1B-204ENST00000554659 FOXG1P55316 489 aaPredicted RBP11.5□□□□□ -0.57
VTI1B-204ENST00000554659 PYY3Q5JQD4 70 aa11.5□□□□□ -0.57
VTI1B-204ENST00000554659 KLHDC3Q9BQ90 382 aa11.5□□□□□ -0.57
VTI1B-204ENST00000554659 ADCYAP1P18509 176 aa11.5□□□□□ -0.57
VTI1B-204ENST00000554659 TMEM155Q4W5P6 130 aa11.5□□□□□ -0.57
VTI1B-204ENST00000554659 OR9G4Q8NGQ1 327 aa11.5□□□□□ -0.57
VTI1B-204ENST00000554659 KIF26BQ2KJY2 2108 aa11.5□□□□□ -0.57
VTI1B-204ENST00000554659 LURAP1LQ8IV03 231 aa11.5□□□□□ -0.57
VTI1B-204ENST00000554659 LINC01549A6NIU2 74 aa11.5□□□□□ -0.57
VTI1B-204ENST00000554659 M0R2P5 195 aa11.5□□□□□ -0.57
VTI1B-204ENST00000554659 OCIAD2Q56VL3 154 aa11.5□□□□□ -0.57
VTI1B-204ENST00000554659 MRPL52Q86TS9 123 aaKnown RBP11.5□□□□□ -0.57
VTI1B-204ENST00000554659 GTSCR1Q86UQ5 136 aa11.5□□□□□ -0.57
VTI1B-204ENST00000554659 RNASE6Q93091 150 aaKnown RBP11.5□□□□□ -0.57
VTI1B-204ENST00000554659 TRAV8-1A0A0A6YYK1 113 aa11.49□□□□□ -0.57
VTI1B-204ENST00000554659 SIP14410 1827 aa11.49□□□□□ -0.57
VTI1B-204ENST00000554659 C5orf63A6NC05 138 aa11.49□□□□□ -0.57
VTI1B-204ENST00000554659 MYOD1P15172 320 aa11.49□□□□□ -0.57
VTI1B-204ENST00000554659 RHOGP84095 191 aa11.49□□□□□ -0.57
VTI1B-204ENST00000554659 DMRTC2Q8IXT2 367 aaPredicted RBP11.49□□□□□ -0.57
VTI1B-204ENST00000554659 BCL6BQ8N143 479 aaPredicted RBP11.49□□□□□ -0.57
VTI1B-204ENST00000554659 PHLDA1Q8WV24 401 aaPredicted RBP11.49□□□□□ -0.57
VTI1B-204ENST00000554659 PRB4P10163 310 aaPredicted RBP11.49□□□□□ -0.57
VTI1B-204ENST00000554659 RNF144BQ7Z419 303 aa11.49□□□□□ -0.57
VTI1B-204ENST00000554659 WDR90Q96KV7 1748 aa11.49□□□□□ -0.57
VTI1B-204ENST00000554659 CRPP02741 224 aa11.49□□□□□ -0.57
VTI1B-204ENST00000554659 PRB3Q04118 309 aaPredicted RBP11.49□□□□□ -0.57
VTI1B-204ENST00000554659 FOXL2NBQ6ZUU3 175 aa11.49□□□□□ -0.57
VTI1B-204ENST00000554659 TIMM23O14925 209 aa11.48□□□□□ -0.57
VTI1B-204ENST00000554659 HIST1H4AP62805 103 aaKnown RBP11.48□□□□□ -0.57
VTI1B-204ENST00000554659 TPTE2P1Q5T6R2 138 aa11.48□□□□□ -0.57
VTI1B-204ENST00000554659 FAM168AQ92567 244 aa11.48□□□□□ -0.57
VTI1B-204ENST00000554659 RFNGQ9Y644 331 aa11.48□□□□□ -0.57
VTI1B-204ENST00000554659 NPIPB5A8MRT5 1133 aa11.48□□□□□ -0.57
VTI1B-204ENST00000554659 TMEM249Q2WGJ8 235 aa11.48□□□□□ -0.57
VTI1B-204ENST00000554659 PRR31Q5SQ13 230 aa11.48□□□□□ -0.57
VTI1B-204ENST00000554659 TRGV9Q99603 122 aa11.48□□□□□ -0.57
VTI1B-204ENST00000554659 FHL1Q13642 323 aa11.48□□□□□ -0.57
VTI1B-204ENST00000554659 ASCL4Q6XD76 172 aa11.48□□□□□ -0.57
VTI1B-204ENST00000554659 GTSF1LQ9H1H1 148 aa11.48□□□□□ -0.57
VTI1B-204ENST00000554659 PLSCR4Q9NRQ2 329 aa11.48□□□□□ -0.57
VTI1B-204ENST00000554659 ANK1P16157 1881 aa11.48□□□□□ -0.57
VTI1B-204ENST00000554659 Q6P435 159 aa11.47□□□□□ -0.57
VTI1B-204ENST00000554659 TMEM256Q8N2U0 113 aa11.47□□□□□ -0.57
VTI1B-204ENST00000554659 MRPL27Q9P0M9 148 aaKnown RBP11.47□□□□□ -0.57
VTI1B-204ENST00000554659 DOCK6Q96HP0 2047 aa11.47□□□□□ -0.57
VTI1B-204ENST00000554659 ATRXP46100 2492 aa11.47□□□□□ -0.57
VTI1B-204ENST00000554659 TCRAP04437 139 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 2145.7 ms