RNA–Protein interactions for RNA: ENST00000553145.1

HDAC4-217, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-217ENST00000553145 IAH1Q2TAA2 248 aaPredicted RBP13.88□□□□□ -0.19
HDAC4-217ENST00000553145 C16orf54Q6UWD8 224 aa13.88□□□□□ -0.19
HDAC4-217ENST00000553145 ZBTB8BQ8NAP8 495 aaPredicted RBP13.88□□□□□ -0.19
HDAC4-217ENST00000553145 STXBP6Q8NFX7 210 aa13.88□□□□□ -0.19
HDAC4-217ENST00000553145 NARS2Q96I59 477 aaKnown RBP13.88□□□□□ -0.19
HDAC4-217ENST00000553145 RABAC1Q9UI14 185 aa13.88□□□□□ -0.19
HDAC4-217ENST00000553145 TRAV2A0A0B4J234 112 aa13.87□□□□□ -0.19
HDAC4-217ENST00000553145 K7EQG2 157 aa13.87□□□□□ -0.19
HDAC4-217ENST00000553145 SSSCA1O60232 199 aa13.87□□□□□ -0.19
HDAC4-217ENST00000553145 SCGB1D2O95969 90 aa13.87□□□□□ -0.19
HDAC4-217ENST00000553145 PAX9P55771 341 aa13.87□□□□□ -0.19
HDAC4-217ENST00000553145 ASAH1Q13510 395 aa13.87□□□□□ -0.19
HDAC4-217ENST00000553145 THAP8Q8NA92 274 aa13.87□□□□□ -0.19
HDAC4-217ENST00000553145 RNF125Q96EQ8 232 aa13.87□□□□□ -0.19
HDAC4-217ENST00000553145 GRAMD2BQ96HH9 432 aa13.87□□□□□ -0.19
HDAC4-217ENST00000553145 OVOL2Q9BRP0 275 aa13.87□□□□□ -0.19
HDAC4-217ENST00000553145 WDR12Q9GZL7 423 aaKnown RBP13.87□□□□□ -0.19
HDAC4-217ENST00000553145 STRAPQ9Y3F4 350 aaKnown RBP13.87□□□□□ -0.19
HDAC4-217ENST00000553145 KMT2CQ8NEZ4 4911 aaKnown RBP13.87□□□□□ -0.19
HDAC4-217ENST00000553145 FAM240BA0A1B0GVZ2 78 aa13.86□□□□□ -0.19
HDAC4-217ENST00000553145 CCNKO75909 580 aa13.86□□□□□ -0.19
HDAC4-217ENST00000553145 H2AFB2P0C5Z0 115 aa13.86□□□□□ -0.19
HDAC4-217ENST00000553145 APOC4P55056 127 aa13.86□□□□□ -0.19
HDAC4-217ENST00000553145 CMC4P56277 68 aaPredicted RBP13.86□□□□□ -0.19
HDAC4-217ENST00000553145 DEFB131AP59861 70 aa13.86□□□□□ -0.19
HDAC4-217ENST00000553145 IFITM3Q01628 133 aa13.86□□□□□ -0.19
HDAC4-217ENST00000553145 OR2F1Q13607 317 aa13.86□□□□□ -0.19
HDAC4-217ENST00000553145 ZNF846Q147U1 533 aa13.86□□□□□ -0.19
HDAC4-217ENST00000553145 ZNF431Q8TF32 576 aaPredicted RBP13.86□□□□□ -0.19
HDAC4-217ENST00000553145 TRGV9Q99603 122 aa13.86□□□□□ -0.19
HDAC4-217ENST00000553145 PBDC1Q9BVG4 233 aa13.86□□□□□ -0.19
HDAC4-217ENST00000553145 PSENENQ9NZ42 101 aa13.86□□□□□ -0.19
HDAC4-217ENST00000553145 PMS2P5A8MQ11 134 aa13.85□□□□□ -0.19
HDAC4-217ENST00000553145 BUB3O43684 328 aa13.85□□□□□ -0.19
HDAC4-217ENST00000553145 UPK1BO75841 260 aa13.85□□□□□ -0.19
HDAC4-217ENST00000553145 CASC10Q5T4H9 136 aa13.85□□□□□ -0.19
HDAC4-217ENST00000553145 LEMD1Q68G75 181 aa13.85□□□□□ -0.19
HDAC4-217ENST00000553145 ACOT7LQ6ZUV0 252 aa13.85□□□□□ -0.19
HDAC4-217ENST00000553145 DCANP1Q8TF63 244 aa13.85□□□□□ -0.19
HDAC4-217ENST00000553145 SMIM8Q96KF7 97 aa13.85□□□□□ -0.19
HDAC4-217ENST00000553145 GSKIPQ9P0R6 139 aa13.85□□□□□ -0.19
HDAC4-217ENST00000553145 RCL1Q9Y2P8 373 aaKnown RBP13.85□□□□□ -0.19
HDAC4-217ENST00000553145 KIR2DL5BA0A0G2JN68 375 aa13.84□□□□□ -0.19
HDAC4-217ENST00000553145 KIR2DL5BA0A0G2JPC4 375 aa13.84□□□□□ -0.19
HDAC4-217ENST00000553145 LYL1P12980 280 aa13.84□□□□□ -0.19
HDAC4-217ENST00000553145 EIF2B2P49770 351 aaKnown RBP13.84□□□□□ -0.19
HDAC4-217ENST00000553145 LYZP61626 148 aa13.84□□□□□ -0.19
HDAC4-217ENST00000553145 DEFB135Q30KP9 77 aa13.84□□□□□ -0.19
HDAC4-217ENST00000553145 MZT2BQ6NZ67 158 aa13.84□□□□□ -0.19
HDAC4-217ENST00000553145 KIR2DL5AQ8N109 375 aa13.84□□□□□ -0.19
HDAC4-217ENST00000553145 STPG3Q8N7X2 389 aa13.84□□□□□ -0.19
HDAC4-217ENST00000553145 KIR2DL5BQ8NHK3 375 aa13.84□□□□□ -0.19
HDAC4-217ENST00000553145 HELTA6NFD8 242 aa13.83□□□□□ -0.2
HDAC4-217ENST00000553145 MBPP02686 304 aaPredicted RBP13.83□□□□□ -0.2
HDAC4-217ENST00000553145 ZNF688P0C7X2 276 aa13.83□□□□□ -0.2
HDAC4-217ENST00000553145 ZFAND6Q6FIF0 208 aa13.83□□□□□ -0.2
HDAC4-217ENST00000553145 OR8G2PQ6IF36 304 aa13.83□□□□□ -0.2
HDAC4-217ENST00000553145 TMEM14EPQ6UXP3 125 aa13.83□□□□□ -0.2
HDAC4-217ENST00000553145 Q6ZWC4 215 aa13.83□□□□□ -0.2
HDAC4-217ENST00000553145 C12orf45Q8N5I9 185 aaPredicted RBP13.83□□□□□ -0.2
HDAC4-217ENST00000553145 UBE2CO00762 179 aa13.82□□□□□ -0.2
HDAC4-217ENST00000553145 FABP1P07148 127 aa13.82□□□□□ -0.2
HDAC4-217ENST00000553145 AKR1C1Q04828 323 aa13.82□□□□□ -0.2
HDAC4-217ENST00000553145 TMEM182Q6ZP80 229 aaPredicted RBP13.82□□□□□ -0.2
HDAC4-217ENST00000553145 BATF3Q9NR55 127 aa13.82□□□□□ -0.2
HDAC4-217ENST00000553145 SNRPGP15A8MWD9 76 aa13.81□□□□□ -0.2
HDAC4-217ENST00000553145 FAM25EA8MYX2 175 aa13.81□□□□□ -0.2
HDAC4-217ENST00000553145 METTL15P1P0C7V9 234 aa13.81□□□□□ -0.2
HDAC4-217ENST00000553145 GATA2P23769 480 aaPredicted RBP13.81□□□□□ -0.2
HDAC4-217ENST00000553145 SIGLEC15Q6ZMC9 328 aa13.81□□□□□ -0.2
HDAC4-217ENST00000553145 RAB40CQ96S21 281 aa13.81□□□□□ -0.2
HDAC4-217ENST00000553145 TP53TG1Q9Y2A0 90 aa13.81□□□□□ -0.2
HDAC4-217ENST00000553145 C7orf66A4D0T2 115 aa13.8□□□□□ -0.2
HDAC4-217ENST00000553145 SPRY2O43597 315 aa13.8□□□□□ -0.2
HDAC4-217ENST00000553145 TSC22D2O75157 780 aa13.8□□□□□ -0.2
HDAC4-217ENST00000553145 AP2S1P53680 142 aaPredicted RBP13.8□□□□□ -0.2
HDAC4-217ENST00000553145 TAS2R30P59541 319 aa13.8□□□□□ -0.2
HDAC4-217ENST00000553145 RRAS2P62070 204 aaPredicted RBP13.8□□□□□ -0.2
HDAC4-217ENST00000553145 TMEM144Q7Z5S9 345 aa13.8□□□□□ -0.2
HDAC4-217ENST00000553145 ENKURQ8TC29 256 aa13.8□□□□□ -0.2
HDAC4-217ENST00000553145 RNF183Q96D59 192 aa13.8□□□□□ -0.2
HDAC4-217ENST00000553145 NRN1Q9NPD7 142 aa13.8□□□□□ -0.2
HDAC4-217ENST00000553145 SMCO3A2RU48 225 aa13.79□□□□□ -0.2
HDAC4-217ENST00000553145 C5orf51A6NDU8 294 aa13.79□□□□□ -0.2
HDAC4-217ENST00000553145 K7EPK0 472 aa13.79□□□□□ -0.2
HDAC4-217ENST00000553145 IL5P05113 134 aa13.79□□□□□ -0.2
HDAC4-217ENST00000553145 NUP62P37198 522 aaPredicted RBP13.79□□□□□ -0.2
HDAC4-217ENST00000553145 ARL16Q0P5N6 197 aa13.79□□□□□ -0.2
HDAC4-217ENST00000553145 CSTL1Q9H114 145 aa13.79□□□□□ -0.2
HDAC4-217ENST00000553145 LSM5Q9Y4Y9 91 aaKnown RBP13.79□□□□□ -0.2
HDAC4-217ENST00000553145 KNCNA6PVL3 124 aa13.78□□□□□ -0.2
HDAC4-217ENST00000553145 DLK1P80370 383 aa13.78□□□□□ -0.2
HDAC4-217ENST00000553145 GSG1LQ6UXU4 331 aa13.78□□□□□ -0.2
HDAC4-217ENST00000553145 NRARPQ7Z6K4 114 aa13.78□□□□□ -0.2
HDAC4-217ENST00000553145 C2orf50Q96LR7 162 aa13.78□□□□□ -0.2
HDAC4-217ENST00000553145 C11orf1Q9H5F2 150 aa13.78□□□□□ -0.2
HDAC4-217ENST00000553145 PSMG4Q5JS54 123 aa13.77□□□□□ -0.21
HDAC4-217ENST00000553145 TRPT1Q86TN4 253 aaKnown RBP13.77□□□□□ -0.21
HDAC4-217ENST00000553145 BPIFCQ8NFQ6 507 aa13.77□□□□□ -0.21
HDAC4-217ENST00000553145 OR10P1Q8NGE3 313 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms