RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 CITED2Q99967 270 aaPredicted RBP12.35□□□□□ -0.43
PRPF40A-212ENST00000545856 ELOA3CA0A087WX78 387 aaPredicted RBP12.34□□□□□ -0.43
PRPF40A-212ENST00000545856 NUDT19A8MXV4 375 aa12.34□□□□□ -0.43
PRPF40A-212ENST00000545856 LINC01619G3V211 115 aa12.34□□□□□ -0.43
PRPF40A-212ENST00000545856 BMPR1BO00238 502 aa12.34□□□□□ -0.43
PRPF40A-212ENST00000545856 IGHV3-48P01763 117 aa12.34□□□□□ -0.43
PRPF40A-212ENST00000545856 RAB5CP51148 216 aa12.34□□□□□ -0.43
PRPF40A-212ENST00000545856 ELLP55199 621 aaPredicted RBP12.34□□□□□ -0.43
PRPF40A-212ENST00000545856 FHL3Q13643 280 aa12.34□□□□□ -0.43
PRPF40A-212ENST00000545856 FAM106AQ4KMX7 169 aa12.34□□□□□ -0.43
PRPF40A-212ENST00000545856 HSD17B11Q8NBQ5 300 aa12.34□□□□□ -0.43
PRPF40A-212ENST00000545856 OR1L4Q8NGR5 311 aa12.34□□□□□ -0.43
PRPF40A-212ENST00000545856 PXMP4Q9Y6I8 212 aa12.34□□□□□ -0.43
PRPF40A-212ENST00000545856 LGALS9O00182 355 aa12.33□□□□□ -0.44
PRPF40A-212ENST00000545856 PSG1P11464 419 aa12.33□□□□□ -0.44
PRPF40A-212ENST00000545856 B2MP61769 119 aa12.33□□□□□ -0.44
PRPF40A-212ENST00000545856 DEFA5Q01523 94 aa12.33□□□□□ -0.44
PRPF40A-212ENST00000545856 RPEL1Q2QD12 228 aa12.33□□□□□ -0.44
PRPF40A-212ENST00000545856 TIGITQ495A1 244 aa12.33□□□□□ -0.44
PRPF40A-212ENST00000545856 SHISA2Q6UWI4 295 aa12.33□□□□□ -0.44
PRPF40A-212ENST00000545856 REC114Q7Z4M0 266 aa12.33□□□□□ -0.44
PRPF40A-212ENST00000545856 STPG3Q8N7X2 389 aa12.33□□□□□ -0.44
PRPF40A-212ENST00000545856 DPF1Q92782 380 aa12.33□□□□□ -0.44
PRPF40A-212ENST00000545856 CHRDL1Q9BU40 450 aa12.33□□□□□ -0.44
PRPF40A-212ENST00000545856 SLC39A9Q9NUM3 307 aa12.33□□□□□ -0.44
PRPF40A-212ENST00000545856 A8MWP6 167 aa12.32□□□□□ -0.44
PRPF40A-212ENST00000545856 K7EMT4 169 aa12.32□□□□□ -0.44
PRPF40A-212ENST00000545856 IGHV3-23P01764 117 aa12.32□□□□□ -0.44
PRPF40A-212ENST00000545856 LINC00869P0C866 280 aa12.32□□□□□ -0.44
PRPF40A-212ENST00000545856 MYCNOSP40205 109 aa12.32□□□□□ -0.44
PRPF40A-212ENST00000545856 ACOT6Q3I5F7 207 aaPredicted RBP12.32□□□□□ -0.44
PRPF40A-212ENST00000545856 DPPA3Q6W0C5 159 aa12.32□□□□□ -0.44
PRPF40A-212ENST00000545856 OR4F17Q8NGA8 305 aa12.32□□□□□ -0.44
PRPF40A-212ENST00000545856 OR1N2Q8NGR9 330 aa12.32□□□□□ -0.44
PRPF40A-212ENST00000545856 GATAD1Q8WUU5 269 aa12.32□□□□□ -0.44
PRPF40A-212ENST00000545856 TMEM190Q8WZ59 177 aa12.32□□□□□ -0.44
PRPF40A-212ENST00000545856 RNF125Q96EQ8 232 aa12.32□□□□□ -0.44
PRPF40A-212ENST00000545856 OR4F4Q96R69 305 aa12.32□□□□□ -0.44
PRPF40A-212ENST00000545856 S4R3C0 116 aa12.32□□□□□ -0.44
PRPF40A-212ENST00000545856 WI2-2373I1.2A0A1W2PRP0 233 aa12.31□□□□□ -0.44
PRPF40A-212ENST00000545856 BMI1P35226 326 aa12.31□□□□□ -0.44
PRPF40A-212ENST00000545856 ZNF90Q03938 601 aa12.31□□□□□ -0.44
PRPF40A-212ENST00000545856 C12orf54Q6X4T0 127 aa12.31□□□□□ -0.44
PRPF40A-212ENST00000545856 C1QL4Q86Z23 238 aa12.31□□□□□ -0.44
PRPF40A-212ENST00000545856 OR11H1Q8NG94 326 aa12.31□□□□□ -0.44
PRPF40A-212ENST00000545856 LRRC20Q8TCA0 184 aa12.31□□□□□ -0.44
PRPF40A-212ENST00000545856 RSG1Q9BU20 258 aa12.31□□□□□ -0.44
PRPF40A-212ENST00000545856 UFC1Q9Y3C8 167 aa12.31□□□□□ -0.44
PRPF40A-212ENST00000545856 ANKRD34BA5PLL1 514 aa12.3□□□□□ -0.44
PRPF40A-212ENST00000545856 ADARB2-AS1A8MUL3 147 aa12.3□□□□□ -0.44
PRPF40A-212ENST00000545856 HYPMO75409 117 aa12.3□□□□□ -0.44
PRPF40A-212ENST00000545856 M6PRP20645 277 aa12.3□□□□□ -0.44
PRPF40A-212ENST00000545856 KRTAP21-3Q3LHN1 58 aa12.3□□□□□ -0.44
PRPF40A-212ENST00000545856 MARC2Q969Z3 335 aa12.3□□□□□ -0.44
PRPF40A-212ENST00000545856 MRPL32Q9BYC8 188 aaKnown RBP12.3□□□□□ -0.44
PRPF40A-212ENST00000545856 SLC25A32Q9H2D1 315 aa12.3□□□□□ -0.44
PRPF40A-212ENST00000545856 ZFAND3Q9H8U3 227 aa12.3□□□□□ -0.44
PRPF40A-212ENST00000545856 PUS1Q9Y606 427 aaKnown RBP eCLIP12.3□□□□□ -0.44
PRPF40A-212ENST00000545856 FBN1P35555 2871 aaKnown RBP12.3□□□□□ -0.44
PRPF40A-212ENST00000545856 WNK1Q9H4A3 2382 aa12.3□□□□□ -0.44
PRPF40A-212ENST00000545856 IGHV4OR15-8A0A075B7B6 117 aa12.3□□□□□ -0.44
PRPF40A-212ENST00000545856 A0A087WW49 117 aa12.3□□□□□ -0.44
PRPF40A-212ENST00000545856 PPP5D1E7EU14 171 aa12.3□□□□□ -0.44
PRPF40A-212ENST00000545856 IFNA7P01567 189 aa12.3□□□□□ -0.44
PRPF40A-212ENST00000545856 TRBV12-3P01733 135 aa12.3□□□□□ -0.44
PRPF40A-212ENST00000545856 IL4P05112 153 aa12.3□□□□□ -0.44
PRPF40A-212ENST00000545856 HOXD3P31249 432 aaPredicted RBP12.3□□□□□ -0.44
PRPF40A-212ENST00000545856 KRTAP10-3P60369 221 aa12.3□□□□□ -0.44
PRPF40A-212ENST00000545856 FFAR4Q5NUL3 377 aa12.3□□□□□ -0.44
PRPF40A-212ENST00000545856 AKR1C8PQ5T2L2 129 aa12.3□□□□□ -0.44
PRPF40A-212ENST00000545856 MIC13Q5XKP0 118 aa12.3□□□□□ -0.44
PRPF40A-212ENST00000545856 TOMM20LQ6UXN7 152 aa12.3□□□□□ -0.44
PRPF40A-212ENST00000545856 C8orf86Q6ZUL3 223 aa12.3□□□□□ -0.44
PRPF40A-212ENST00000545856 C3orf56Q8N813 242 aa12.3□□□□□ -0.44
PRPF40A-212ENST00000545856 NARS2Q96I59 477 aaKnown RBP12.3□□□□□ -0.44
PRPF40A-212ENST00000545856 OR5B12Q96R08 314 aa12.3□□□□□ -0.44
PRPF40A-212ENST00000545856 DAZ1Q9NQZ3 744 aaKnown RBP12.3□□□□□ -0.44
PRPF40A-212ENST00000545856 PEMTQ9UBM1 199 aa12.3□□□□□ -0.44
PRPF40A-212ENST00000545856 CCL24O00175 119 aa12.29□□□□□ -0.44
PRPF40A-212ENST00000545856 COX7A2P2O60397 106 aa12.29□□□□□ -0.44
PRPF40A-212ENST00000545856 KLF5Q13887 457 aaPredicted RBP12.29□□□□□ -0.44
PRPF40A-212ENST00000545856 TMEM41BQ5BJD5 291 aa12.29□□□□□ -0.44
PRPF40A-212ENST00000545856 METTL26Q96S19 204 aa12.29□□□□□ -0.44
PRPF40A-212ENST00000545856 TMEM231Q9H6L2 316 aa12.29□□□□□ -0.44
PRPF40A-212ENST00000545856 DNAJC4Q9NNZ3 241 aa12.29□□□□□ -0.44
PRPF40A-212ENST00000545856 MRPL27Q9P0M9 148 aaKnown RBP12.29□□□□□ -0.44
PRPF40A-212ENST00000545856 RABAC1Q9UI14 185 aa12.29□□□□□ -0.44
PRPF40A-212ENST00000545856 A0A1W2PS18 150 aa12.28□□□□□ -0.44
PRPF40A-212ENST00000545856 CD5P06127 495 aa12.28□□□□□ -0.44
PRPF40A-212ENST00000545856 SULT1A2P50226 295 aa12.28□□□□□ -0.44
PRPF40A-212ENST00000545856 RHOBP62745 196 aa12.28□□□□□ -0.44
PRPF40A-212ENST00000545856 TEX261Q6UWH6 196 aa12.28□□□□□ -0.44
PRPF40A-212ENST00000545856 C11orf44Q8N8P7 122 aa12.28□□□□□ -0.44
PRPF40A-212ENST00000545856 RAX2Q96IS3 184 aa12.28□□□□□ -0.44
PRPF40A-212ENST00000545856 SH3BGRL3Q9H299 93 aa12.28□□□□□ -0.44
PRPF40A-212ENST00000545856 HIGD1AQ9Y241 93 aa12.28□□□□□ -0.44
PRPF40A-212ENST00000545856 BOLA1Q9Y3E2 137 aa12.28□□□□□ -0.44
PRPF40A-212ENST00000545856 SEC14L6B5MCN3 397 aa12.27□□□□□ -0.45
PRPF40A-212ENST00000545856 YIF1AO95070 293 aa12.27□□□□□ -0.45
PRPF40A-212ENST00000545856 OR5G3P0C626 314 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms