RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 NUP35Q8NFH5 326 aa6.71□□□□□ -1.34
PRKAB1-207ENST00000542698 C20orf144Q9BQM9 153 aa6.71□□□□□ -1.34
PRKAB1-207ENST00000542698 OTORQ9NRC9 128 aa6.71□□□□□ -1.34
PRKAB1-207ENST00000542698 SPG11Q96JI7 2443 aa6.71□□□□□ -1.34
PRKAB1-207ENST00000542698 CHD9Q3L8U1 2897 aa6.71□□□□□ -1.34
PRKAB1-207ENST00000542698 SNAI2O43623 268 aa6.7□□□□□ -1.34
PRKAB1-207ENST00000542698 PRB3Q04118 309 aaPredicted RBP6.7□□□□□ -1.34
PRKAB1-207ENST00000542698 TMEM78Q5T7P6 136 aa6.7□□□□□ -1.34
PRKAB1-207ENST00000542698 LHFPL4Q7Z7J7 247 aa6.7□□□□□ -1.34
PRKAB1-207ENST00000542698 FAM169BQ8N8A8 192 aa6.7□□□□□ -1.34
PRKAB1-207ENST00000542698 CGB1A6NKQ9 187 aa6.7□□□□□ -1.34
PRKAB1-207ENST00000542698 F5H697 171 aa6.7□□□□□ -1.34
PRKAB1-207ENST00000542698 TDGF1P3P51864 188 aa6.7□□□□□ -1.34
PRKAB1-207ENST00000542698 ZNF474Q6S9Z5 364 aaPredicted RBP6.7□□□□□ -1.34
PRKAB1-207ENST00000542698 C8orf46Q8TAG6 207 aa6.7□□□□□ -1.34
PRKAB1-207ENST00000542698 PMCHL2Q9BQD1 86 aa6.7□□□□□ -1.34
PRKAB1-207ENST00000542698 TMEM208Q9BTX3 173 aa6.7□□□□□ -1.34
PRKAB1-207ENST00000542698 MAP1LC3AQ9H492 121 aa6.7□□□□□ -1.34
PRKAB1-207ENST00000542698 RABAC1Q9UI14 185 aa6.7□□□□□ -1.34
PRKAB1-207ENST00000542698 CHD3Q12873 2000 aaKnown RBP6.7□□□□□ -1.34
PRKAB1-207ENST00000542698 MBD3L4A6NDZ8 208 aaPredicted RBP6.7□□□□□ -1.34
PRKAB1-207ENST00000542698 MBD3L3A6NE82 208 aaPredicted RBP6.7□□□□□ -1.34
PRKAB1-207ENST00000542698 MBD3L5A6NJ08 208 aaPredicted RBP6.7□□□□□ -1.34
PRKAB1-207ENST00000542698 H0YJW9 148 aa6.7□□□□□ -1.34
PRKAB1-207ENST00000542698 CFHR2P36980 270 aa6.7□□□□□ -1.34
PRKAB1-207ENST00000542698 Q6AWC8 147 aa6.7□□□□□ -1.34
PRKAB1-207ENST00000542698 MBD3L2Q8NHZ7 208 aaPredicted RBP6.7□□□□□ -1.34
PRKAB1-207ENST00000542698 NEUROG1Q92886 237 aa6.7□□□□□ -1.34
PRKAB1-207ENST00000542698 RNASE6Q93091 150 aaKnown RBP6.7□□□□□ -1.34
PRKAB1-207ENST00000542698 RAB37Q96AX2 223 aa6.7□□□□□ -1.34
PRKAB1-207ENST00000542698 PRELID3AQ96N28 172 aa6.7□□□□□ -1.34
PRKAB1-207ENST00000542698 GAFA1Q96PS6 74 aa6.7□□□□□ -1.34
PRKAB1-207ENST00000542698 IGKV3-7A0A075B6H7 116 aa6.69□□□□□ -1.34
PRKAB1-207ENST00000542698 MUC21A0A0G2JKD1 596 aa6.69□□□□□ -1.34
PRKAB1-207ENST00000542698 MUC21A0A140T8X8 626 aa6.69□□□□□ -1.34
PRKAB1-207ENST00000542698 FAM106CPP0CH98 169 aa6.69□□□□□ -1.34
PRKAB1-207ENST00000542698 NPPCP23582 126 aa6.69□□□□□ -1.34
PRKAB1-207ENST00000542698 SRSF6Q13247 344 aaKnown RBP6.69□□□□□ -1.34
PRKAB1-207ENST00000542698 VWC2Q2TAL6 325 aa6.69□□□□□ -1.34
PRKAB1-207ENST00000542698 MUC21Q5SSG8 566 aa6.69□□□□□ -1.34
PRKAB1-207ENST00000542698 C11orf53Q8IXP5 236 aa6.69□□□□□ -1.34
PRKAB1-207ENST00000542698 CIARTQ8N365 385 aaPredicted RBP6.69□□□□□ -1.34
PRKAB1-207ENST00000542698 MRPL27Q9P0M9 148 aaKnown RBP6.69□□□□□ -1.34
PRKAB1-207ENST00000542698 A0A1W2PS18 150 aa6.69□□□□□ -1.34
PRKAB1-207ENST00000542698 UNQ5815/PRO19632Q6UWF5 114 aa6.69□□□□□ -1.34
PRKAB1-207ENST00000542698 Q6ZWC4 215 aa6.69□□□□□ -1.34
PRKAB1-207ENST00000542698 LINC01560Q8TB33 94 aa6.69□□□□□ -1.34
PRKAB1-207ENST00000542698 ABHD17AQ96GS6 310 aa6.69□□□□□ -1.34
PRKAB1-207ENST00000542698 ZNF414Q96IQ9 312 aa6.69□□□□□ -1.34
PRKAB1-207ENST00000542698 ZNRD1Q9P1U0 126 aa6.69□□□□□ -1.34
PRKAB1-207ENST00000542698 PEF1Q9UBV8 284 aaKnown RBP6.69□□□□□ -1.34
PRKAB1-207ENST00000542698 LOC105371242A0A075B767 164 aa6.69□□□□□ -1.34
PRKAB1-207ENST00000542698 A0A1B0GW15 77 aa6.69□□□□□ -1.34
PRKAB1-207ENST00000542698 FBLL1A6NHQ2 334 aaKnown RBP6.69□□□□□ -1.34
PRKAB1-207ENST00000542698 GCSHP23434 173 aa6.69□□□□□ -1.34
PRKAB1-207ENST00000542698 CDKN1AP38936 164 aa6.69□□□□□ -1.34
PRKAB1-207ENST00000542698 SCGB1D4Q6XE38 83 aa6.69□□□□□ -1.34
PRKAB1-207ENST00000542698 C21orf62Q9NYP8 219 aa6.69□□□□□ -1.34
PRKAB1-207ENST00000542698 PSG1P11464 419 aa6.68□□□□□ -1.34
PRKAB1-207ENST00000542698 PRSS8Q16651 343 aa6.68□□□□□ -1.34
PRKAB1-207ENST00000542698 ORMDL3Q8N138 153 aa6.68□□□□□ -1.34
PRKAB1-207ENST00000542698 C11orf52Q96A22 123 aa6.68□□□□□ -1.34
PRKAB1-207ENST00000542698 CHCHD1Q96BP2 118 aaKnown RBP6.68□□□□□ -1.34
PRKAB1-207ENST00000542698 V9GYV3 84 aa6.68□□□□□ -1.34
PRKAB1-207ENST00000542698 FAM181BA6NEQ2 426 aa6.68□□□□□ -1.34
PRKAB1-207ENST00000542698 C10orf142B7Z368 130 aa6.68□□□□□ -1.34
PRKAB1-207ENST00000542698 IGLV2-14P01704 120 aa6.68□□□□□ -1.34
PRKAB1-207ENST00000542698 TCRAP04437 139 aa6.68□□□□□ -1.34
PRKAB1-207ENST00000542698 TMPRSS3P57727 454 aa6.68□□□□□ -1.34
PRKAB1-207ENST00000542698 MRPL52Q86TS9 123 aaKnown RBP6.68□□□□□ -1.34
PRKAB1-207ENST00000542698 FBXL7Q9UJT9 491 aa6.68□□□□□ -1.34
PRKAB1-207ENST00000542698 PSG8Q9UQ74 426 aa6.68□□□□□ -1.34
PRKAB1-207ENST00000542698 A1L4Q6 167 aa6.68□□□□□ -1.34
PRKAB1-207ENST00000542698 GGTLC3B5MD39 225 aa6.68□□□□□ -1.34
PRKAB1-207ENST00000542698 TMEM178BH3BS89 294 aa6.68□□□□□ -1.34
PRKAB1-207ENST00000542698 C17orf58Q2M2W7 97 aa6.68□□□□□ -1.34
PRKAB1-207ENST00000542698 PRR31Q5SQ13 230 aa6.68□□□□□ -1.34
PRKAB1-207ENST00000542698 ODF3L1Q8IXM7 274 aa6.68□□□□□ -1.34
PRKAB1-207ENST00000542698 RNF125Q96EQ8 232 aa6.68□□□□□ -1.34
PRKAB1-207ENST00000542698 TRGV9Q99603 122 aa6.68□□□□□ -1.34
PRKAB1-207ENST00000542698 NCOR1P1Q9H4R4 102 aa6.68□□□□□ -1.34
PRKAB1-207ENST00000542698 UNC80Q8N2C7 3258 aa6.68□□□□□ -1.34
PRKAB1-207ENST00000542698 IGLV1-44P01699 117 aa6.67□□□□□ -1.34
PRKAB1-207ENST00000542698 FABP2P12104 132 aa6.67□□□□□ -1.34
PRKAB1-207ENST00000542698 RAB9AP51151 201 aa6.67□□□□□ -1.34
PRKAB1-207ENST00000542698 LOXL3P58215 753 aa6.67□□□□□ -1.34
PRKAB1-207ENST00000542698 RPL15P61313 204 aaKnown RBP6.67□□□□□ -1.34
PRKAB1-207ENST00000542698 PRR20EP86478 221 aa6.67□□□□□ -1.34
PRKAB1-207ENST00000542698 PRR20CP86479 221 aa6.67□□□□□ -1.34
PRKAB1-207ENST00000542698 PRR20DP86480 221 aa6.67□□□□□ -1.34
PRKAB1-207ENST00000542698 PRR20BP86481 221 aa6.67□□□□□ -1.34
PRKAB1-207ENST00000542698 PRR20AP86496 221 aa6.67□□□□□ -1.34
PRKAB1-207ENST00000542698 SRSF9Q13242 221 aaKnown RBP eCLIP6.67□□□□□ -1.34
PRKAB1-207ENST00000542698 ERASQ7Z444 233 aa6.67□□□□□ -1.34
PRKAB1-207ENST00000542698 EXOC3-AS1Q8N2X6 119 aa6.67□□□□□ -1.34
PRKAB1-207ENST00000542698 TNFRSF14Q92956 283 aa6.67□□□□□ -1.34
PRKAB1-207ENST00000542698 C18orf15Q96N68 181 aa6.67□□□□□ -1.34
PRKAB1-207ENST00000542698 ST20Q9HBF5 79 aa6.67□□□□□ -1.34
PRKAB1-207ENST00000542698 LPAR2Q9HBW0 351 aa6.67□□□□□ -1.34
PRKAB1-207ENST00000542698 TRAV8-1A0A0A6YYK1 113 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms