RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 MRPL36Q9P0J6 103 aaKnown RBP4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 KAAG1Q9UBP8 84 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 Q9UFV3 132 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 NAT8BQ9UHF3 227 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 WASHC3Q9Y3C0 194 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 AMMECR1Q9Y4X0 333 aaPredicted RBP4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 KLF12Q9Y4X4 402 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 RNF114Q9Y508 228 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 PPIAL4AQ9Y536 164 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 IGSF10Q6WRI0 2623 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 A0A1W2PPI3 338 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 IGLC7A0M8Q6 106 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 M0QZK8 103 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 PEX7O00628 323 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 TCAPO15273 167 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 COX7A2P2O60397 106 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 CRYGBP07316 175 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 PYYP10082 97 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 LOXP28300 417 aaPredicted RBP4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 MC5RP33032 325 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 CTRLP40313 264 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 REG1BP48304 166 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 SUB1P53999 127 aaKnown RBP eCLIP4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 BPIFB3P59826 476 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 BSPH1Q075Z2 132 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 TMEM183BQ1AE95 376 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 TMEM155Q4W5P6 130 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 CFAP161Q6P656 301 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 LYPD2Q6UXB3 125 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 TOMM20LQ6UXN7 152 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 C11orf42Q8N5U0 333 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 SIGLECL1Q8N7X8 197 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 FAM168AQ92567 244 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 SMIM12Q96EX1 92 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 GRAMD2BQ96HH9 432 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 KCNS1Q96KK3 526 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 LINC00479Q96M42 142 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 MRPL27Q9P0M9 148 aaKnown RBP4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 CTSZQ9UBR2 303 aa4.17□□□□□ -1.74
ATPAF1-212ENST00000542495 PRSS47A8MTI9 375 aa4.16□□□□□ -1.74
ATPAF1-212ENST00000542495 NDUFB3O43676 98 aa4.16□□□□□ -1.74
ATPAF1-212ENST00000542495 ZNF324O75467 553 aaPredicted RBP4.16□□□□□ -1.74
ATPAF1-212ENST00000542495 OR2J3O76001 311 aa4.16□□□□□ -1.74
ATPAF1-212ENST00000542495 APCSP02743 223 aa4.16□□□□□ -1.74
ATPAF1-212ENST00000542495 MGST1P10620 155 aaKnown RBP4.16□□□□□ -1.74
ATPAF1-212ENST00000542495 SRIP30626 198 aa4.16□□□□□ -1.74
ATPAF1-212ENST00000542495 LGALS7P47929 136 aa4.16□□□□□ -1.74
ATPAF1-212ENST00000542495 PRRX1P54821 245 aa4.16□□□□□ -1.74
ATPAF1-212ENST00000542495 MFAP2P55001 183 aa4.16□□□□□ -1.74
ATPAF1-212ENST00000542495 TCL1AP56279 114 aa4.16□□□□□ -1.74
ATPAF1-212ENST00000542495 PLP1P60201 277 aa4.16□□□□□ -1.74
ATPAF1-212ENST00000542495 KLF5Q13887 457 aaPredicted RBP4.16□□□□□ -1.74
ATPAF1-212ENST00000542495 TBR1Q16650 682 aa4.16□□□□□ -1.74
ATPAF1-212ENST00000542495 VMA21Q3ZAQ7 101 aa4.16□□□□□ -1.74
ATPAF1-212ENST00000542495 LRRC10Q5BKY1 277 aa4.16□□□□□ -1.74
ATPAF1-212ENST00000542495 C10orf55Q5SWW7 151 aa4.16□□□□□ -1.74
ATPAF1-212ENST00000542495 GDF5OSQ5U4N7 250 aa4.16□□□□□ -1.74
ATPAF1-212ENST00000542495 MRPL54Q6P161 138 aaKnown RBP4.16□□□□□ -1.74
ATPAF1-212ENST00000542495 ZNF841Q6ZN19 808 aa4.16□□□□□ -1.74
ATPAF1-212ENST00000542495 NIT1Q86X76 327 aa4.16□□□□□ -1.74
ATPAF1-212ENST00000542495 RNF152Q8N8N0 203 aa4.16□□□□□ -1.74
ATPAF1-212ENST00000542495 TEX45Q8NA69 505 aa4.16□□□□□ -1.74
ATPAF1-212ENST00000542495 NUDT10Q8NFP7 164 aa4.16□□□□□ -1.74
ATPAF1-212ENST00000542495 STXBP6Q8NFX7 210 aa4.16□□□□□ -1.74
ATPAF1-212ENST00000542495 OR10X1Q8NGY0 326 aa4.16□□□□□ -1.74
ATPAF1-212ENST00000542495 TNFRSF14Q92956 283 aa4.16□□□□□ -1.74
ATPAF1-212ENST00000542495 RNASE6Q93091 150 aaKnown RBP4.16□□□□□ -1.74
ATPAF1-212ENST00000542495 NUDT11Q96G61 164 aa4.16□□□□□ -1.74
ATPAF1-212ENST00000542495 RITA1Q96K30 269 aa4.16□□□□□ -1.74
ATPAF1-212ENST00000542495 RCHY1Q96PM5 261 aa4.16□□□□□ -1.74
ATPAF1-212ENST00000542495 TRGV9Q99603 122 aa4.16□□□□□ -1.74
ATPAF1-212ENST00000542495 CHRDL1Q9BU40 450 aa4.16□□□□□ -1.74
ATPAF1-212ENST00000542495 MLST8Q9BVC4 326 aa4.16□□□□□ -1.74
ATPAF1-212ENST00000542495 SAMD10Q9BYL1 202 aa4.16□□□□□ -1.74
ATPAF1-212ENST00000542495 SAP30LQ9HAJ7 183 aa4.16□□□□□ -1.74
ATPAF1-212ENST00000542495 NRN1Q9NPD7 142 aa4.16□□□□□ -1.74
ATPAF1-212ENST00000542495 ZNF586Q9NXT0 402 aa4.16□□□□□ -1.74
ATPAF1-212ENST00000542495 EPDR1Q9UM22 224 aa4.16□□□□□ -1.74
ATPAF1-212ENST00000542495 TBL2Q9Y4P3 447 aaKnown RBP4.16□□□□□ -1.74
ATPAF1-212ENST00000542495 YLPM1P49750 1951 aaKnown RBP4.15□□□□□ -1.74
ATPAF1-212ENST00000542495 A0A1B0GXF2 115 aa4.15□□□□□ -1.74
ATPAF1-212ENST00000542495 SLC25A17O43808 307 aa4.15□□□□□ -1.74
ATPAF1-212ENST00000542495 SPINK4O60575 86 aa4.15□□□□□ -1.74
ATPAF1-212ENST00000542495 ZNF253O75346 499 aa4.15□□□□□ -1.74
ATPAF1-212ENST00000542495 CA1P00915 261 aaPredicted RBP4.15□□□□□ -1.74
ATPAF1-212ENST00000542495 PRB1P04280 392 aa4.15□□□□□ -1.74
ATPAF1-212ENST00000542495 IGHV1-8P0DP01 117 aa4.15□□□□□ -1.74
ATPAF1-212ENST00000542495 UCNP55089 124 aa4.15□□□□□ -1.74
ATPAF1-212ENST00000542495 SLC35B1P78383 322 aa4.15□□□□□ -1.74
ATPAF1-212ENST00000542495 SLAQ13239 276 aa4.15□□□□□ -1.74
ATPAF1-212ENST00000542495 KIAA1644Q3SXP7 199 aa4.15□□□□□ -1.74
ATPAF1-212ENST00000542495 LCE1DQ5T752 114 aa4.15□□□□□ -1.74
ATPAF1-212ENST00000542495 RUSC1-AS1Q66K80 236 aa4.15□□□□□ -1.74
ATPAF1-212ENST00000542495 ETFRF1Q6IPR1 90 aa4.15□□□□□ -1.74
ATPAF1-212ENST00000542495 C19orf35Q6ZS72 473 aa4.15□□□□□ -1.74
ATPAF1-212ENST00000542495 LINC00305Q7Z4B0 112 aa4.15□□□□□ -1.74
ATPAF1-212ENST00000542495 ATP5L2Q7Z4Y8 100 aa4.15□□□□□ -1.74
ATPAF1-212ENST00000542495 TMEM116Q8NCL8 245 aa4.15□□□□□ -1.74
ATPAF1-212ENST00000542495 NUP35Q8NFH5 326 aa4.15□□□□□ -1.74
ATPAF1-212ENST00000542495 OR4B1Q8NGF8 309 aa4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms