RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 USF2Q15853 346 aaPredicted RBP14.8□□□□□ -0.04
DDB1-220ENST00000542337 ACTL10Q5JWF8 245 aa14.8□□□□□ -0.04
DDB1-220ENST00000542337 SPANXN2Q5MJ10 180 aa14.8□□□□□ -0.04
DDB1-220ENST00000542337 TRPT1Q86TN4 253 aaKnown RBP14.8□□□□□ -0.04
DDB1-220ENST00000542337 V9GYH0 126 aa14.8□□□□□ -0.04
DDB1-220ENST00000542337 KNCNA6PVL3 124 aa14.79□□□□□ -0.04
DDB1-220ENST00000542337 SLC25A6P12236 298 aa14.79□□□□□ -0.04
DDB1-220ENST00000542337 INPP1P49441 399 aa14.79□□□□□ -0.04
DDB1-220ENST00000542337 PLECQ15149 4684 aaKnown RBP14.79□□□□□ -0.04
DDB1-220ENST00000542337 PSMG4Q5JS54 123 aa14.79□□□□□ -0.04
DDB1-220ENST00000542337 SIGLEC15Q6ZMC9 328 aa14.79□□□□□ -0.04
DDB1-220ENST00000542337 PBDC1Q9BVG4 233 aa14.79□□□□□ -0.04
DDB1-220ENST00000542337 SEPSECSQ9HD40 501 aaKnown RBP14.79□□□□□ -0.04
DDB1-220ENST00000542337 FBXL17Q9UF56 701 aa14.79□□□□□ -0.04
DDB1-220ENST00000542337 PAIP2BQ9ULR5 123 aaKnown RBP14.79□□□□□ -0.04
DDB1-220ENST00000542337 TMED3Q9Y3Q3 217 aa14.79□□□□□ -0.04
DDB1-220ENST00000542337 FAM90A26D6RGX4 464 aa14.78□□□□□ -0.04
DDB1-220ENST00000542337 BUB3O43684 328 aa14.78□□□□□ -0.04
DDB1-220ENST00000542337 GAMTQ14353 236 aa14.78□□□□□ -0.04
DDB1-220ENST00000542337 LRTM2Q8N967 370 aa14.78□□□□□ -0.04
DDB1-220ENST00000542337 RNF125Q96EQ8 232 aa14.78□□□□□ -0.04
DDB1-220ENST00000542337 CIB3Q96Q77 187 aaPredicted RBP14.78□□□□□ -0.04
DDB1-220ENST00000542337 RAB40CQ96S21 281 aa14.78□□□□□ -0.04
DDB1-220ENST00000542337 NRN1Q9NPD7 142 aa14.78□□□□□ -0.04
DDB1-220ENST00000542337 SNRPGP15A8MWD9 76 aa14.77□□□□□ -0.05
DDB1-220ENST00000542337 PITX3O75364 302 aa14.77□□□□□ -0.05
DDB1-220ENST00000542337 SFT2D2O95562 160 aa14.77□□□□□ -0.05
DDB1-220ENST00000542337 NANOS2P60321 138 aaKnown RBP14.77□□□□□ -0.05
DDB1-220ENST00000542337 NUTF2P61970 127 aaKnown RBP14.77□□□□□ -0.05
DDB1-220ENST00000542337 ZNF79Q15937 498 aa14.77□□□□□ -0.05
DDB1-220ENST00000542337 OR8G2PQ6IF36 304 aa14.77□□□□□ -0.05
DDB1-220ENST00000542337 CCDC190Q86UF4 302 aa14.77□□□□□ -0.05
DDB1-220ENST00000542337 CENPSQ8N2Z9 138 aa14.77□□□□□ -0.05
DDB1-220ENST00000542337 ALMS1Q8TCU4 4167 aa14.77□□□□□ -0.05
DDB1-220ENST00000542337 IAPPP10997 89 aa14.76□□□□□ -0.05
DDB1-220ENST00000542337 ZNF701M0R085 212 aaPredicted RBP14.75□□□□□ -0.05
DDB1-220ENST00000542337 DEFB4AO15263 64 aa14.75□□□□□ -0.05
DDB1-220ENST00000542337 MIFP14174 115 aa14.75□□□□□ -0.05
DDB1-220ENST00000542337 PPP1R1AQ13522 171 aa14.75□□□□□ -0.05
DDB1-220ENST00000542337 PPP1R14BQ96C90 147 aa14.75□□□□□ -0.05
DDB1-220ENST00000542337 HOXB5P09067 269 aa14.74□□□□□ -0.05
DDB1-220ENST00000542337 ID1P41134 155 aa14.74□□□□□ -0.05
DDB1-220ENST00000542337 UBE2MP61081 183 aaKnown RBP14.74□□□□□ -0.05
DDB1-220ENST00000542337 LYZP61626 148 aa14.74□□□□□ -0.05
DDB1-220ENST00000542337 ZNF90Q03938 601 aa14.74□□□□□ -0.05
DDB1-220ENST00000542337 TRIQKQ629K1 86 aa14.74□□□□□ -0.05
DDB1-220ENST00000542337 C1QTNF4Q9BXJ3 329 aa14.74□□□□□ -0.05
DDB1-220ENST00000542337 NAP1L6A6NFF2 107 aa14.73□□□□□ -0.05
DDB1-220ENST00000542337 SYNGR2O43760 224 aa14.73□□□□□ -0.05
DDB1-220ENST00000542337 CFDP00746 253 aaPredicted RBP14.73□□□□□ -0.05
DDB1-220ENST00000542337 GIG44P09565 113 aaPredicted RBP14.73□□□□□ -0.05
DDB1-220ENST00000542337 C1orf194Q5T5A4 169 aa14.73□□□□□ -0.05
DDB1-220ENST00000542337 TRGV9Q99603 122 aa14.73□□□□□ -0.05
DDB1-220ENST00000542337 TBC1D24Q9ULP9 559 aa14.73□□□□□ -0.05
DDB1-220ENST00000542337 WRBO00258 174 aa14.72□□□□□ -0.05
DDB1-220ENST00000542337 C4BPBP20851 252 aa14.72□□□□□ -0.05
DDB1-220ENST00000542337 OR2F1Q13607 317 aa14.72□□□□□ -0.05
DDB1-220ENST00000542337 GGNBP1Q5YKI7 109 aa14.72□□□□□ -0.05
DDB1-220ENST00000542337 C2CD4CQ8TF44 421 aa14.72□□□□□ -0.05
DDB1-220ENST00000542337 MAGT1Q9H0U3 335 aa14.72□□□□□ -0.05
DDB1-220ENST00000542337 HYDINQ4G0P3 5121 aa14.72□□□□□ -0.05
DDB1-220ENST00000542337 IGKV1D-37A0A075B6S9 117 aa14.71□□□□□ -0.05
DDB1-220ENST00000542337 IGHV4-28A0A0C4DH34 117 aa14.71□□□□□ -0.05
DDB1-220ENST00000542337 CENPXA8MT69 81 aa14.71□□□□□ -0.05
DDB1-220ENST00000542337 C11orf94C9JXX5 98 aa14.71□□□□□ -0.05
DDB1-220ENST00000542337 S100A7P31151 101 aa14.71□□□□□ -0.05
DDB1-220ENST00000542337 NKX2-1P43699 371 aaPredicted RBP14.71□□□□□ -0.05
DDB1-220ENST00000542337 Q8NAQ8 132 aa14.71□□□□□ -0.05
DDB1-220ENST00000542337 LINC00052Q96N35 136 aa14.71□□□□□ -0.05
DDB1-220ENST00000542337 SRRQ9GZT4 340 aa14.71□□□□□ -0.05
DDB1-220ENST00000542337 RBM38Q9H0Z9 239 aaKnown RBP14.71□□□□□ -0.05
DDB1-220ENST00000542337 HRH4Q9H3N8 390 aa14.71□□□□□ -0.05
DDB1-220ENST00000542337 CLEC5AQ9NY25 188 aa14.71□□□□□ -0.05
DDB1-220ENST00000542337 ZNF705EA8MWA4 302 aaPredicted RBP14.7□□□□□ -0.06
DDB1-220ENST00000542337 H3BMM0 161 aa14.7□□□□□ -0.06
DDB1-220ENST00000542337 IFNA21P01568 189 aa14.7□□□□□ -0.06
DDB1-220ENST00000542337 TCTAP57738 103 aa14.7□□□□□ -0.06
DDB1-220ENST00000542337 SPANXN5Q5MJ07 72 aa14.7□□□□□ -0.06
DDB1-220ENST00000542337 LGALS9CQ6DKI2 356 aa14.7□□□□□ -0.06
DDB1-220ENST00000542337 OR8I2Q8N0Y5 310 aa14.7□□□□□ -0.06
DDB1-220ENST00000542337 COQ8AQ8NI60 647 aa14.7□□□□□ -0.06
DDB1-220ENST00000542337 STRAPQ9Y3F4 350 aaKnown RBP14.7□□□□□ -0.06
DDB1-220ENST00000542337 SAMD13Q5VXD3 122 aa14.69□□□□□ -0.06
DDB1-220ENST00000542337 THAP8Q8NA92 274 aa14.69□□□□□ -0.06
DDB1-220ENST00000542337 C9orf170A2RU37 121 aa14.68□□□□□ -0.06
DDB1-220ENST00000542337 NDUFB6O95139 128 aa14.68□□□□□ -0.06
DDB1-220ENST00000542337 RBMY1A1P0DJD3 496 aaKnown RBP14.68□□□□□ -0.06
DDB1-220ENST00000542337 RBMY1CP0DJD4 496 aa14.68□□□□□ -0.06
DDB1-220ENST00000542337 HLA-DRB4P13762 266 aa14.68□□□□□ -0.06
DDB1-220ENST00000542337 PSMB3P49720 205 aa14.68□□□□□ -0.06
DDB1-220ENST00000542337 RBMY1FQ15415 496 aaKnown RBP14.68□□□□□ -0.06
DDB1-220ENST00000542337 XCL2Q9UBD3 114 aa14.68□□□□□ -0.06
DDB1-220ENST00000542337 HLA-DRB4X5D2U9 266 aa14.68□□□□□ -0.06
DDB1-220ENST00000542337 GALR1P47211 349 aa14.67□□□□□ -0.06
DDB1-220ENST00000542337 AKR1C1Q04828 323 aa14.67□□□□□ -0.06
DDB1-220ENST00000542337 BAK1Q16611 211 aa14.67□□□□□ -0.06
DDB1-220ENST00000542337 CSNK1G2-AS1Q8NCQ2 148 aa14.67□□□□□ -0.06
DDB1-220ENST00000542337 BPIFCQ8NFQ6 507 aa14.67□□□□□ -0.06
DDB1-220ENST00000542337 X6R8D5 127 aa14.67□□□□□ -0.06
DDB1-220ENST00000542337 LINC00854A0A1B0GVQ3 168 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms