RNA–Protein interactions for RNA: ENST00000541488.1

PRKDC-210, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 3

Gene PRKDC, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-210	ENST00000541488	POLR1D	Q9Y2S0	133 aa		0.82	□□□□□ -2.28
PRKDC-210	ENST00000541488	NEB	P20929	6669 aa		0.82	□□□□□ -2.28
PRKDC-210	ENST00000541488	MALRD1	Q5VYJ5	2156 aa		0.81	□□□□□ -2.28
PRKDC-210	ENST00000541488	MYH2	Q9UKX2	1941 aa		0.81	□□□□□ -2.28
PRKDC-210	ENST00000541488	IGKV1D-43	A0A0B4J1Z2	117 aa		0.81	□□□□□ -2.28
PRKDC-210	ENST00000541488	MDFIC2	A0A1B0GVS7	189 aa		0.81	□□□□□ -2.28
PRKDC-210	ENST00000541488	RFPL4A	A6NLU0	287 aa		0.81	□□□□□ -2.28
PRKDC-210	ENST00000541488	ZNF705F	A8MVS1	300 aa	Predicted RBP	0.81	□□□□□ -2.28
PRKDC-210	ENST00000541488	DISC1	C4P0D8	188 aa		0.81	□□□□□ -2.28
PRKDC-210	ENST00000541488		F5H768	121 aa		0.81	□□□□□ -2.28
PRKDC-210	ENST00000541488	RFPL4AL1	F8VTS6	287 aa		0.81	□□□□□ -2.28
PRKDC-210	ENST00000541488	CETN3	O15182	167 aa		0.81	□□□□□ -2.28
PRKDC-210	ENST00000541488	KLRC4	O43908	158 aa		0.81	□□□□□ -2.28
PRKDC-210	ENST00000541488	BPGM	P07738	259 aa		0.81	□□□□□ -2.28
PRKDC-210	ENST00000541488	IL3	P08700	152 aa		0.81	□□□□□ -2.28
PRKDC-210	ENST00000541488	OCM2	P0CE71	109 aa		0.81	□□□□□ -2.28
PRKDC-210	ENST00000541488	MYL12A	P19105	171 aa		0.81	□□□□□ -2.28
PRKDC-210	ENST00000541488	CA5A	P35218	305 aa		0.81	□□□□□ -2.28
PRKDC-210	ENST00000541488	JOSD1	Q15040	202 aa	Predicted RBP	0.81	□□□□□ -2.28
PRKDC-210	ENST00000541488	BATF	Q16520	125 aa		0.81	□□□□□ -2.28
PRKDC-210	ENST00000541488	SBSN	Q6UWP8	590 aa		0.81	□□□□□ -2.28
PRKDC-210	ENST00000541488	C5orf46	Q6UWT4	87 aa		0.81	□□□□□ -2.28
PRKDC-210	ENST00000541488		Q6ZRN7	208 aa	Predicted RBP	0.81	□□□□□ -2.28
PRKDC-210	ENST00000541488	SLC51B	Q86UW2	128 aa		0.81	□□□□□ -2.28
PRKDC-210	ENST00000541488	COA5	Q86WW8	74 aa		0.81	□□□□□ -2.28
PRKDC-210	ENST00000541488	GPHB5	Q86YW7	130 aa		0.81	□□□□□ -2.28
PRKDC-210	ENST00000541488	WFDC11	Q8NEX6	87 aa		0.81	□□□□□ -2.28
PRKDC-210	ENST00000541488	ZNF675	Q8TD23	568 aa		0.81	□□□□□ -2.28
PRKDC-210	ENST00000541488	SPACA4	Q8TDM5	124 aa		0.81	□□□□□ -2.28
PRKDC-210	ENST00000541488	TMA16	Q96EY4	203 aa	Known RBP	0.81	□□□□□ -2.28
PRKDC-210	ENST00000541488	NMNAT3	Q96T66	252 aa		0.81	□□□□□ -2.28
PRKDC-210	ENST00000541488	NAA38	Q9BRA0	125 aa	Known RBP	0.81	□□□□□ -2.28
PRKDC-210	ENST00000541488	DOHH	Q9BU89	302 aa		0.81	□□□□□ -2.28
PRKDC-210	ENST00000541488	PLXNA2	O75051	1894 aa		0.81	□□□□□ -2.28
PRKDC-210	ENST00000541488	MYH4	Q9Y623	1939 aa		0.81	□□□□□ -2.28
PRKDC-210	ENST00000541488	HRNR	Q86YZ3	2850 aa	Predicted RBP	0.81	□□□□□ -2.28
PRKDC-210	ENST00000541488	MED23	Q9ULK4	1368 aa		0.81	□□□□□ -2.28
PRKDC-210	ENST00000541488	GPR98	Q8WXG9	6306 aa		0.8	□□□□□ -2.28
PRKDC-210	ENST00000541488	DOCK5	Q9H7D0	1870 aa		0.8	□□□□□ -2.28
PRKDC-210	ENST00000541488	MACF1	Q9UPN3	7388 aa	Known RBP	0.8	□□□□□ -2.28
PRKDC-210	ENST00000541488	KMT2A	Q03164	3969 aa		0.8	□□□□□ -2.28
PRKDC-210	ENST00000541488	TMED7-TICAM2	A0A0A6YYA0	188 aa		0.8	□□□□□ -2.28
PRKDC-210	ENST00000541488		A0A0J9YW62	118 aa		0.8	□□□□□ -2.28
PRKDC-210	ENST00000541488		A0A1B0GVG6	124 aa		0.8	□□□□□ -2.28
PRKDC-210	ENST00000541488	PFDN6	O15212	129 aa		0.8	□□□□□ -2.28
PRKDC-210	ENST00000541488	PIN1P1	O15428	100 aa		0.8	□□□□□ -2.28
PRKDC-210	ENST00000541488	COCH	O43405	550 aa		0.8	□□□□□ -2.28
PRKDC-210	ENST00000541488	CREBL2	O60519	120 aa	Predicted RBP	0.8	□□□□□ -2.28
PRKDC-210	ENST00000541488	NAPSA	O96009	420 aa		0.8	□□□□□ -2.28
PRKDC-210	ENST00000541488	HLA-DRA	P01903	254 aa		0.8	□□□□□ -2.28
PRKDC-210	ENST00000541488	C1QC	P02747	245 aa		0.8	□□□□□ -2.28
PRKDC-210	ENST00000541488	SERPINA7	P05543	415 aa		0.8	□□□□□ -2.28
PRKDC-210	ENST00000541488	TPM3	P06753	285 aa		0.8	□□□□□ -2.28
PRKDC-210	ENST00000541488	COX6B1	P14854	86 aa		0.8	□□□□□ -2.28
PRKDC-210	ENST00000541488	SLCO1A2	P46721	670 aa		0.8	□□□□□ -2.28
PRKDC-210	ENST00000541488	CDK9	P50750	372 aa	Known RBP	0.8	□□□□□ -2.28
PRKDC-210	ENST00000541488	EMP2	P54851	167 aa		0.8	□□□□□ -2.28
PRKDC-210	ENST00000541488	TPI1	P60174	286 aa		0.8	□□□□□ -2.28
PRKDC-210	ENST00000541488	HIST1H4A	P62805	103 aa	Known RBP	0.8	□□□□□ -2.28
PRKDC-210	ENST00000541488	ZNF791	Q3KP31	576 aa	Predicted RBP	0.8	□□□□□ -2.28
PRKDC-210	ENST00000541488	OGFRL1	Q5TC84	451 aa	Predicted RBP	0.8	□□□□□ -2.28
PRKDC-210	ENST00000541488	FAM151B	Q6UXP7	276 aa		0.8	□□□□□ -2.28
PRKDC-210	ENST00000541488	RASSF6	Q6ZTQ3	369 aa		0.8	□□□□□ -2.28
PRKDC-210	ENST00000541488	SLC22A24	Q8N4F4	322 aa		0.8	□□□□□ -2.28
PRKDC-210	ENST00000541488	PIGX	Q8TBF5	258 aa		0.8	□□□□□ -2.28
PRKDC-210	ENST00000541488	RAB2B	Q8WUD1	216 aa		0.8	□□□□□ -2.28
PRKDC-210	ENST00000541488	EEF1AKMT1	Q8WVE0	214 aa		0.8	□□□□□ -2.28
PRKDC-210	ENST00000541488	ASB17	Q8WXJ9	295 aa		0.8	□□□□□ -2.28
PRKDC-210	ENST00000541488	GNPNAT1	Q96EK6	184 aa	Predicted RBP	0.8	□□□□□ -2.28
PRKDC-210	ENST00000541488	SPZ1	Q9BXG8	430 aa		0.8	□□□□□ -2.28
PRKDC-210	ENST00000541488	DRC3	Q9H069	523 aa		0.8	□□□□□ -2.28
PRKDC-210	ENST00000541488	CYSTM1	Q9H1C7	97 aa		0.8	□□□□□ -2.28
PRKDC-210	ENST00000541488	FKBP14	Q9NWM8	211 aa		0.8	□□□□□ -2.28
PRKDC-210	ENST00000541488	USE1	Q9NZ43	259 aa		0.8	□□□□□ -2.28
PRKDC-210	ENST00000541488	AK3	Q9UIJ7	227 aa		0.8	□□□□□ -2.28
PRKDC-210	ENST00000541488	DKKL1	Q9UK85	242 aa		0.8	□□□□□ -2.28
PRKDC-210	ENST00000541488	TIMM9	Q9Y5J7	89 aa		0.8	□□□□□ -2.28
PRKDC-210	ENST00000541488	HSPG2	P98160	4391 aa		0.8	□□□□□ -2.28
PRKDC-210	ENST00000541488	NUP210L	Q5VU65	1888 aa		0.8	□□□□□ -2.28
PRKDC-210	ENST00000541488	NUP210	Q8TEM1	1887 aa	Predicted RBP	0.8	□□□□□ -2.28
PRKDC-210	ENST00000541488	DMBT1	Q9UGM3	2413 aa	Predicted RBP	0.79	□□□□□ -2.28
PRKDC-210	ENST00000541488	NUMA1	Q14980	2115 aa		0.79	□□□□□ -2.28
PRKDC-210	ENST00000541488	CACNA1C	Q13936	2221 aa		0.79	□□□□□ -2.28
PRKDC-210	ENST00000541488	DIDO1	Q9BTC0	2240 aa	Known RBP	0.79	□□□□□ -2.28
PRKDC-210	ENST00000541488	IGHV1-69-2	A0A0G2JMI3	117 aa		0.79	□□□□□ -2.28
PRKDC-210	ENST00000541488	LCE6A	A0A183	80 aa		0.79	□□□□□ -2.28
PRKDC-210	ENST00000541488	COX7A2L	O14548	114 aa		0.79	□□□□□ -2.28
PRKDC-210	ENST00000541488	SLC16A4	O15374	487 aa		0.79	□□□□□ -2.28
PRKDC-210	ENST00000541488	TYMS	P04818	313 aa		0.79	□□□□□ -2.28
PRKDC-210	ENST00000541488	MAGEA2	P43356	314 aa		0.79	□□□□□ -2.28
PRKDC-210	ENST00000541488	MAGEA12	P43365	314 aa		0.79	□□□□□ -2.28
PRKDC-210	ENST00000541488	POLR2G	P62487	172 aa	Known RBP eCLIP	0.79	□□□□□ -2.28
PRKDC-210	ENST00000541488	TPM4	P67936	248 aa		0.79	□□□□□ -2.28
PRKDC-210	ENST00000541488	CAV1	Q03135	178 aa		0.79	□□□□□ -2.28
PRKDC-210	ENST00000541488	MLLT11	Q13015	90 aa	Predicted RBP	0.79	□□□□□ -2.28
PRKDC-210	ENST00000541488	PPP1R1A	Q13522	171 aa		0.79	□□□□□ -2.28
PRKDC-210	ENST00000541488	LRRC75B	Q2VPJ9	315 aa		0.79	□□□□□ -2.28
PRKDC-210	ENST00000541488	LRRN1	Q6UXK5	716 aa		0.79	□□□□□ -2.28
PRKDC-210	ENST00000541488	KTN1-AS1	Q86SY8	53 aa		0.79	□□□□□ -2.28
PRKDC-210	ENST00000541488	LRRC28	Q86X40	367 aa	Predicted RBP	0.79	□□□□□ -2.28

Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms