RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 CXCL3P19876 107 aa14.2□□□□□ -0.14
VPS33A-205ENST00000541169 CRYBB3P26998 211 aa14.2□□□□□ -0.14
VPS33A-205ENST00000541169 EIF2B2P49770 351 aaKnown RBP14.2□□□□□ -0.14
VPS33A-205ENST00000541169 RAP2BP61225 183 aa14.2□□□□□ -0.14
VPS33A-205ENST00000541169 FCN2Q15485 313 aa14.2□□□□□ -0.14
VPS33A-205ENST00000541169 GTSCR1Q86UQ5 136 aa14.2□□□□□ -0.14
VPS33A-205ENST00000541169 LILRB2Q8N423 598 aa14.2□□□□□ -0.14
VPS33A-205ENST00000541169 BPIFCQ8NFQ6 507 aa14.2□□□□□ -0.14
VPS33A-205ENST00000541169 ZNF414Q96IQ9 312 aa14.2□□□□□ -0.14
VPS33A-205ENST00000541169 RHPN1-AS1Q9BWJ2 59 aa14.2□□□□□ -0.14
VPS33A-205ENST00000541169 AURKAIP1Q9NWT8 199 aaPredicted RBP14.2□□□□□ -0.14
VPS33A-205ENST00000541169 SLC45A2Q9UMX9 530 aa14.2□□□□□ -0.14
VPS33A-205ENST00000541169 IGKV1D-37A0A075B6S9 117 aa14.19□□□□□ -0.14
VPS33A-205ENST00000541169 WI2-2373I1.2A0A1W2PRP0 233 aa14.19□□□□□ -0.14
VPS33A-205ENST00000541169 CHEK1O14757 476 aa14.19□□□□□ -0.14
VPS33A-205ENST00000541169 CST7O76096 145 aa14.19□□□□□ -0.14
VPS33A-205ENST00000541169 IL4P05112 153 aa14.19□□□□□ -0.14
VPS33A-205ENST00000541169 BTNL8Q6UX41 500 aa14.19□□□□□ -0.14
VPS33A-205ENST00000541169 OR11H7Q8NGC8 314 aa14.19□□□□□ -0.14
VPS33A-205ENST00000541169 RNF125Q96EQ8 232 aa14.19□□□□□ -0.14
VPS33A-205ENST00000541169 SPAG8Q99932 426 aaPredicted RBP14.19□□□□□ -0.14
VPS33A-205ENST00000541169 VSIRQ9H7M9 311 aa14.19□□□□□ -0.14
VPS33A-205ENST00000541169 UQCC1Q9NVA1 299 aa14.19□□□□□ -0.14
VPS33A-205ENST00000541169 MLXQ9UH92 298 aa14.19□□□□□ -0.14
VPS33A-205ENST00000541169 RABAC1Q9UI14 185 aa14.19□□□□□ -0.14
VPS33A-205ENST00000541169 RNF24Q9Y225 148 aa14.19□□□□□ -0.14
VPS33A-205ENST00000541169 IGKV1OR2-108A0A075B7D4 117 aa14.18□□□□□ -0.14
VPS33A-205ENST00000541169 TSPAN4O14817 238 aa14.18□□□□□ -0.14
VPS33A-205ENST00000541169 MPDU1O75352 247 aa14.18□□□□□ -0.14
VPS33A-205ENST00000541169 HNRNPCP07910 306 aaKnown RBP eCLIP14.18□□□□□ -0.14
VPS33A-205ENST00000541169 LYL1P12980 280 aa14.18□□□□□ -0.14
VPS33A-205ENST00000541169 VWC2Q2TAL6 325 aa14.18□□□□□ -0.14
VPS33A-205ENST00000541169 PXDC1Q5TGL8 231 aa14.18□□□□□ -0.14
VPS33A-205ENST00000541169 RNF126Q9BV68 326 aa14.18□□□□□ -0.14
VPS33A-205ENST00000541169 TMEM147Q9BVK8 224 aa14.18□□□□□ -0.14
VPS33A-205ENST00000541169 SORL1Q92673 2214 aa14.18□□□□□ -0.14
VPS33A-205ENST00000541169 IGHV3OR16-8A0A075B7F1 116 aa14.17□□□□□ -0.14
VPS33A-205ENST00000541169 IGSF23A1L1A6 192 aa14.17□□□□□ -0.14
VPS33A-205ENST00000541169 AP2S1P53680 142 aaPredicted RBP14.17□□□□□ -0.14
VPS33A-205ENST00000541169 PAFAH1B2P68402 229 aa14.17□□□□□ -0.14
VPS33A-205ENST00000541169 ZNF90Q03938 601 aa14.17□□□□□ -0.14
VPS33A-205ENST00000541169 ZNF546Q86UE3 836 aa14.17□□□□□ -0.14
VPS33A-205ENST00000541169 HAPLN4Q86UW8 402 aa14.17□□□□□ -0.14
VPS33A-205ENST00000541169 TMEM61Q8N0U2 210 aa14.17□□□□□ -0.14
VPS33A-205ENST00000541169 TMEM217Q8N7C4 229 aa14.17□□□□□ -0.14
VPS33A-205ENST00000541169 OR5AC2Q9NZP5 309 aa14.17□□□□□ -0.14
VPS33A-205ENST00000541169 LSM4Q9Y4Z0 139 aaKnown RBP14.17□□□□□ -0.14
VPS33A-205ENST00000541169 H0YIZ8 118 aa14.16□□□□□ -0.14
VPS33A-205ENST00000541169 ZNF207O43670 478 aaKnown RBP14.16□□□□□ -0.14
VPS33A-205ENST00000541169 CCNKO75909 580 aa14.16□□□□□ -0.14
VPS33A-205ENST00000541169 CMC4P56277 68 aaPredicted RBP14.16□□□□□ -0.14
VPS33A-205ENST00000541169 EWSR1Q01844 656 aaKnown RBP eCLIP14.16□□□□□ -0.14
VPS33A-205ENST00000541169 ARL16Q0P5N6 197 aa14.16□□□□□ -0.14
VPS33A-205ENST00000541169 C1orf194Q5T5A4 169 aa14.16□□□□□ -0.14
VPS33A-205ENST00000541169 CYP2G1PQ6ZSU1 146 aa14.16□□□□□ -0.14
VPS33A-205ENST00000541169 CHAC2Q8WUX2 184 aa14.16□□□□□ -0.14
VPS33A-205ENST00000541169 U3KQE9 123 aa14.16□□□□□ -0.14
VPS33A-205ENST00000541169 HELTA6NFD8 242 aa14.15□□□□□ -0.14
VPS33A-205ENST00000541169 PLP1P60201 277 aa14.15□□□□□ -0.14
VPS33A-205ENST00000541169 GUCA2BQ16661 112 aa14.15□□□□□ -0.14
VPS33A-205ENST00000541169 MBD2Q9UBB5 411 aa14.15□□□□□ -0.14
VPS33A-205ENST00000541169 FBXL17Q9UF56 701 aa14.15□□□□□ -0.14
VPS33A-205ENST00000541169 WDR83OSQ9Y284 106 aa14.15□□□□□ -0.14
VPS33A-205ENST00000541169 TRAV2A0A0B4J234 112 aa14.14□□□□□ -0.15
VPS33A-205ENST00000541169 OR4C46A6NHA9 309 aa14.14□□□□□ -0.15
VPS33A-205ENST00000541169 ZNF785A8K8V0 405 aa14.14□□□□□ -0.15
VPS33A-205ENST00000541169 DFFBO76075 338 aa14.14□□□□□ -0.15
VPS33A-205ENST00000541169 RPL12P30050 165 aaKnown RBP14.14□□□□□ -0.15
VPS33A-205ENST00000541169 USF2Q15853 346 aaPredicted RBP14.14□□□□□ -0.15
VPS33A-205ENST00000541169 RNF2Q99496 336 aa14.14□□□□□ -0.15
VPS33A-205ENST00000541169 PBDC1Q9BVG4 233 aa14.14□□□□□ -0.15
VPS33A-205ENST00000541169 AGPAT2O15120 278 aa14.13□□□□□ -0.15
VPS33A-205ENST00000541169 EDN2P20800 178 aa14.13□□□□□ -0.15
VPS33A-205ENST00000541169 LYZP61626 148 aa14.13□□□□□ -0.15
VPS33A-205ENST00000541169 NHLH2Q02577 135 aa14.13□□□□□ -0.15
VPS33A-205ENST00000541169 OR2F1Q13607 317 aa14.13□□□□□ -0.15
VPS33A-205ENST00000541169 OR5C1Q8NGR4 320 aa14.13□□□□□ -0.15
VPS33A-205ENST00000541169 MRAPQ8TCY5 172 aa14.13□□□□□ -0.15
VPS33A-205ENST00000541169 ST8SIA2Q92186 375 aa14.13□□□□□ -0.15
VPS33A-205ENST00000541169 WDR89Q96FK6 387 aaPredicted RBP14.13□□□□□ -0.15
VPS33A-205ENST00000541169 PRR25Q96S07 402 aa14.13□□□□□ -0.15
VPS33A-205ENST00000541169 FAM110AQ9BQ89 295 aa14.13□□□□□ -0.15
VPS33A-205ENST00000541169 KCNIP2Q9NS61 270 aa14.13□□□□□ -0.15
VPS33A-205ENST00000541169 SMAD5-AS1Q9Y6J3 95 aa14.13□□□□□ -0.15
VPS33A-205ENST00000541169 IZUMO1RA6ND01 250 aa14.12□□□□□ -0.15
VPS33A-205ENST00000541169 BUB3O43684 328 aa14.12□□□□□ -0.15
VPS33A-205ENST00000541169 CAMLGP49069 296 aa14.12□□□□□ -0.15
VPS33A-205ENST00000541169 FAM90A2PQ658T7 463 aa14.12□□□□□ -0.15
VPS33A-205ENST00000541169 Q6ZRG5 221 aa14.12□□□□□ -0.15
VPS33A-205ENST00000541169 TCF24Q7RTU0 167 aa14.12□□□□□ -0.15
VPS33A-205ENST00000541169 GPR82Q96P67 336 aa14.12□□□□□ -0.15
VPS33A-205ENST00000541169 HSPB11Q9Y547 144 aa14.12□□□□□ -0.15
VPS33A-205ENST00000541169 ELOA3CA0A087WX78 387 aaPredicted RBP14.11□□□□□ -0.15
VPS33A-205ENST00000541169 A8MZ25 164 aa14.11□□□□□ -0.15
VPS33A-205ENST00000541169 K7EIL1 84 aa14.11□□□□□ -0.15
VPS33A-205ENST00000541169 HYPMO75409 117 aa14.11□□□□□ -0.15
VPS33A-205ENST00000541169 LINC00869P0C866 280 aa14.11□□□□□ -0.15
VPS33A-205ENST00000541169 C16orf54Q6UWD8 224 aa14.11□□□□□ -0.15
VPS33A-205ENST00000541169 INO80EQ8NBZ0 244 aaPredicted RBP14.11□□□□□ -0.15
VPS33A-205ENST00000541169 OR2T35Q8NGX2 323 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms