RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 MEIG1Q5JSS6 88 aa6.29□□□□□ -1.4
PTPRK-219ENST00000531050 MBNL2Q5VZF2 373 aaKnown RBP6.29□□□□□ -1.4
PTPRK-219ENST00000531050 ZNF441Q8N8Z8 693 aa6.29□□□□□ -1.4
PTPRK-219ENST00000531050 PIFOQ8TCI5 191 aa6.29□□□□□ -1.4
PTPRK-219ENST00000531050 RPEQ96AT9 228 aa6.29□□□□□ -1.4
PTPRK-219ENST00000531050 DLL3Q9NYJ7 618 aa6.29□□□□□ -1.4
PTPRK-219ENST00000531050 GAGE2DQ9UEU5 116 aa6.29□□□□□ -1.4
PTPRK-219ENST00000531050 DIDO1Q9BTC0 2240 aaKnown RBP6.29□□□□□ -1.4
PTPRK-219ENST00000531050 CEACAM4O75871 244 aa6.29□□□□□ -1.4
PTPRK-219ENST00000531050 ZNF688P0C7X2 276 aa6.29□□□□□ -1.4
PTPRK-219ENST00000531050 MYOD1P15172 320 aa6.29□□□□□ -1.4
PTPRK-219ENST00000531050 SRSF1Q07955 248 aaKnown RBP eCLIP6.29□□□□□ -1.4
PTPRK-219ENST00000531050 KRTAP27-1Q3LI81 207 aa6.29□□□□□ -1.4
PTPRK-219ENST00000531050 LINC00322Q6ZN03 302 aaPredicted RBP6.29□□□□□ -1.4
PTPRK-219ENST00000531050 OR13H1Q8NG92 308 aa6.29□□□□□ -1.4
PTPRK-219ENST00000531050 ZNF837Q96EG3 531 aaPredicted RBP6.29□□□□□ -1.4
PTPRK-219ENST00000531050 RPP21Q9H633 154 aaKnown RBP6.29□□□□□ -1.4
PTPRK-219ENST00000531050 DKK2Q9UBU2 259 aa6.29□□□□□ -1.4
PTPRK-219ENST00000531050 REV3LO60673 3130 aa6.29□□□□□ -1.4
PTPRK-219ENST00000531050 TRAV4A0A0B4J268 109 aa6.28□□□□□ -1.4
PTPRK-219ENST00000531050 SMIM9A6NGZ8 99 aa6.28□□□□□ -1.4
PTPRK-219ENST00000531050 YPEL5P62699 121 aa6.28□□□□□ -1.4
PTPRK-219ENST00000531050 Q6P435 159 aa6.28□□□□□ -1.4
PTPRK-219ENST00000531050 C16orf47Q6ZP98 133 aaPredicted RBP6.28□□□□□ -1.4
PTPRK-219ENST00000531050 TEN1Q86WV5 123 aa6.28□□□□□ -1.4
PTPRK-219ENST00000531050 C1orf210Q8IVY1 113 aa6.28□□□□□ -1.4
PTPRK-219ENST00000531050 TUSC5Q8IXB3 177 aa6.28□□□□□ -1.4
PTPRK-219ENST00000531050 SLC22A18ASQ8N1D0 253 aa6.28□□□□□ -1.4
PTPRK-219ENST00000531050 ZNF808Q8N4W9 903 aaPredicted RBP6.28□□□□□ -1.4
PTPRK-219ENST00000531050 OR9G1Q8NH87 305 aa6.28□□□□□ -1.4
PTPRK-219ENST00000531050 RASL10AQ92737 203 aa6.28□□□□□ -1.4
PTPRK-219ENST00000531050 ZNF414Q96IQ9 312 aa6.28□□□□□ -1.4
PTPRK-219ENST00000531050 SLC25A33Q9BSK2 321 aa6.28□□□□□ -1.4
PTPRK-219ENST00000531050 PRSS22Q9GZN4 317 aa6.28□□□□□ -1.4
PTPRK-219ENST00000531050 AMMECR1Q9Y4X0 333 aaPredicted RBP6.28□□□□□ -1.4
PTPRK-219ENST00000531050 ESPL1Q14674 2120 aa6.28□□□□□ -1.4
PTPRK-219ENST00000531050 IGKV3D-11A0A0A0MRZ8 115 aa6.28□□□□□ -1.4
PTPRK-219ENST00000531050 GFRA3O60609 400 aa6.28□□□□□ -1.4
PTPRK-219ENST00000531050 CRLF1O75462 422 aa6.28□□□□□ -1.4
PTPRK-219ENST00000531050 TTC32Q5I0X7 151 aa6.28□□□□□ -1.4
PTPRK-219ENST00000531050 TMEM78Q5T7P6 136 aa6.28□□□□□ -1.4
PTPRK-219ENST00000531050 MORN3Q6PF18 240 aaPredicted RBP6.28□□□□□ -1.4
PTPRK-219ENST00000531050 SLC37A2Q8TED4 501 aa6.28□□□□□ -1.4
PTPRK-219ENST00000531050 ZNF488Q96MN9 340 aa6.28□□□□□ -1.4
PTPRK-219ENST00000531050 NABP2Q9BQ15 211 aa6.28□□□□□ -1.4
PTPRK-219ENST00000531050 SPANXA1Q9NS26 97 aa6.28□□□□□ -1.4
PTPRK-219ENST00000531050 UNC80Q8N2C7 3258 aa6.27□□□□□ -1.4
PTPRK-219ENST00000531050 SRRM4A7MD48 611 aaKnown RBP6.27□□□□□ -1.41
PTPRK-219ENST00000531050 OVOL3O00110 214 aa6.27□□□□□ -1.41
PTPRK-219ENST00000531050 PEX7O00628 323 aa6.27□□□□□ -1.41
PTPRK-219ENST00000531050 CXCL12P48061 93 aa6.27□□□□□ -1.41
PTPRK-219ENST00000531050 SUMO3P55854 103 aaPredicted RBP6.27□□□□□ -1.41
PTPRK-219ENST00000531050 LINC00205P59089 165 aa6.27□□□□□ -1.41
PTPRK-219ENST00000531050 FAM53AQ6NSI3 398 aaPredicted RBP6.27□□□□□ -1.41
PTPRK-219ENST00000531050 RBPMS2Q6ZRY4 209 aaKnown RBP6.27□□□□□ -1.41
PTPRK-219ENST00000531050 PRSS3P2Q8NHM4 247 aa6.27□□□□□ -1.41
PTPRK-219ENST00000531050 DAZAP1Q96EP5 407 aaKnown RBP6.27□□□□□ -1.41
PTPRK-219ENST00000531050 RITA1Q96K30 269 aa6.27□□□□□ -1.41
PTPRK-219ENST00000531050 DNAJC30Q96LL9 226 aa6.27□□□□□ -1.41
PTPRK-219ENST00000531050 SPRY4Q9C004 299 aa6.27□□□□□ -1.41
PTPRK-219ENST00000531050 TMEM126AQ9H061 195 aa6.27□□□□□ -1.41
PTPRK-219ENST00000531050 UNC13CQ8NB66 2214 aa6.27□□□□□ -1.41
PTPRK-219ENST00000531050 VCANP13611 3396 aa6.27□□□□□ -1.41
PTPRK-219ENST00000531050 WI2-2373I1.2A0A1W2PRP0 233 aa6.27□□□□□ -1.41
PTPRK-219ENST00000531050 C10orf142B7Z368 130 aa6.27□□□□□ -1.41
PTPRK-219ENST00000531050 NDUFS7O75251 213 aa6.27□□□□□ -1.41
PTPRK-219ENST00000531050 IFI27P40305 119 aaPredicted RBP6.27□□□□□ -1.41
PTPRK-219ENST00000531050 MRPS21P82921 87 aaKnown RBP6.27□□□□□ -1.41
PTPRK-219ENST00000531050 SRYQ05066 204 aa6.27□□□□□ -1.41
PTPRK-219ENST00000531050 CT83Q5H943 113 aa6.27□□□□□ -1.41
PTPRK-219ENST00000531050 FAM27BQ5VT28 67 aa6.27□□□□□ -1.41
PTPRK-219ENST00000531050 ZNF329Q86UD4 541 aa6.27□□□□□ -1.41
PTPRK-219ENST00000531050 DLX4Q92988 240 aaPredicted RBP6.27□□□□□ -1.41
PTPRK-219ENST00000531050 COQ2Q96H96 371 aa6.27□□□□□ -1.41
PTPRK-219ENST00000531050 LINC01587Q99440 93 aa6.27□□□□□ -1.41
PTPRK-219ENST00000531050 FBXL15Q9H469 300 aa6.27□□□□□ -1.41
PTPRK-219ENST00000531050 MDFICQ9P1T7 246 aa6.27□□□□□ -1.41
PTPRK-219ENST00000531050 HHLA3Q9XRX5 114 aa6.27□□□□□ -1.41
PTPRK-219ENST00000531050 TMEM150CB9EJG8 249 aa6.26□□□□□ -1.41
PTPRK-219ENST00000531050 TMEM262E9PQX1 116 aa6.26□□□□□ -1.41
PTPRK-219ENST00000531050 HAX1O00165 279 aa6.26□□□□□ -1.41
PTPRK-219ENST00000531050 PATE4P0C8F1 98 aa6.26□□□□□ -1.41
PTPRK-219ENST00000531050 PRR30Q53SZ7 412 aaPredicted RBP6.26□□□□□ -1.41
PTPRK-219ENST00000531050 ZNF542PQ5EBM4 170 aa6.26□□□□□ -1.41
PTPRK-219ENST00000531050 SLC25A53Q5H9E4 307 aa6.26□□□□□ -1.41
PTPRK-219ENST00000531050 PEAR1Q5VY43 1037 aaPredicted RBP6.26□□□□□ -1.41
PTPRK-219ENST00000531050 Q6Q795 121 aa6.26□□□□□ -1.41
PTPRK-219ENST00000531050 C3orf56Q8N813 242 aa6.26□□□□□ -1.41
PTPRK-219ENST00000531050 F5P12259 2224 aa6.26□□□□□ -1.41
PTPRK-219ENST00000531050 USF3Q68DE3 2245 aa6.26□□□□□ -1.41
PTPRK-219ENST00000531050 C19orf71A6NCJ1 209 aa6.26□□□□□ -1.41
PTPRK-219ENST00000531050 IGHV4-34P06331 123 aa6.26□□□□□ -1.41
PTPRK-219ENST00000531050 EVI2AP22794 236 aa6.26□□□□□ -1.41
PTPRK-219ENST00000531050 HHEXQ03014 270 aa6.26□□□□□ -1.41
PTPRK-219ENST00000531050 PAX8Q06710 450 aa6.26□□□□□ -1.41
PTPRK-219ENST00000531050 TAL2Q16559 108 aa6.26□□□□□ -1.41
PTPRK-219ENST00000531050 Q6ZQT7 251 aa6.26□□□□□ -1.41
PTPRK-219ENST00000531050 MOB3BQ86TA1 216 aa6.26□□□□□ -1.41
PTPRK-219ENST00000531050 MKXQ8IYA7 352 aa6.26□□□□□ -1.41
PTPRK-219ENST00000531050 FADS6Q8N9I5 356 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms