RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 FAM90A2PQ658T7 463 aa11.72□□□□□ -0.53
SREK1-209ENST00000520953 GGACTQ9BVM4 153 aa11.72□□□□□ -0.53
SREK1-209ENST00000520953 LSM4Q9Y4Z0 139 aaKnown RBP11.72□□□□□ -0.53
SREK1-209ENST00000520953 IGKV1D-37A0A075B6S9 117 aa11.71□□□□□ -0.53
SREK1-209ENST00000520953 TRBV9A0A0B4J1U6 114 aa11.71□□□□□ -0.53
SREK1-209ENST00000520953 F8W735 103 aaPredicted RBP11.71□□□□□ -0.53
SREK1-209ENST00000520953 GPX4P36969 197 aaPredicted RBP11.71□□□□□ -0.53
SREK1-209ENST00000520953 FLI1Q01543 452 aaPredicted RBP11.71□□□□□ -0.53
SREK1-209ENST00000520953 PMS2P11Q13670 270 aa11.71□□□□□ -0.53
SREK1-209ENST00000520953 C15orf32Q32M92 178 aa11.71□□□□□ -0.53
SREK1-209ENST00000520953 FAM122CQ6P4D5 195 aa11.71□□□□□ -0.53
SREK1-209ENST00000520953 TMPRSS5Q9H3S3 457 aa11.71□□□□□ -0.53
SREK1-209ENST00000520953 TUBA4BQ9H853 241 aa11.71□□□□□ -0.53
SREK1-209ENST00000520953 PF4V1P10720 104 aa11.71□□□□□ -0.54
SREK1-209ENST00000520953 RAB24Q969Q5 203 aa11.71□□□□□ -0.54
SREK1-209ENST00000520953 HIST1H2BAQ96A08 127 aa11.71□□□□□ -0.54
SREK1-209ENST00000520953 SLC35E1Q96K37 410 aa11.71□□□□□ -0.54
SREK1-209ENST00000520953 TMEM68Q96MH6 324 aa11.71□□□□□ -0.54
SREK1-209ENST00000520953 ACTR3CQ9C0K3 210 aaPredicted RBP11.71□□□□□ -0.54
SREK1-209ENST00000520953 NPVFQ9HCQ7 196 aa11.71□□□□□ -0.54
SREK1-209ENST00000520953 MLXQ9UH92 298 aa11.71□□□□□ -0.54
SREK1-209ENST00000520953 VAX2Q9UIW0 290 aa11.71□□□□□ -0.54
SREK1-209ENST00000520953 IGLV1-40P01703 118 aa11.7□□□□□ -0.54
SREK1-209ENST00000520953 TRGV3P03979 118 aa11.7□□□□□ -0.54
SREK1-209ENST00000520953 ZNF90Q03938 601 aa11.7□□□□□ -0.54
SREK1-209ENST00000520953 GCSAMLQ5JQS6 135 aa11.7□□□□□ -0.54
SREK1-209ENST00000520953 CACNG8Q8WXS5 425 aa11.7□□□□□ -0.54
SREK1-209ENST00000520953 NIPSNAP3BQ9BS92 247 aa11.7□□□□□ -0.54
SREK1-209ENST00000520953 MPDU1O75352 247 aa11.69□□□□□ -0.54
SREK1-209ENST00000520953 IFNA1P01562 189 aa11.69□□□□□ -0.54
SREK1-209ENST00000520953 TPPP2P59282 170 aa11.69□□□□□ -0.54
SREK1-209ENST00000520953 TENM1Q9UKZ4 2725 aa11.69□□□□□ -0.54
SREK1-209ENST00000520953 CORTO00230 105 aa11.69□□□□□ -0.54
SREK1-209ENST00000520953 TCF21O43680 179 aa11.69□□□□□ -0.54
SREK1-209ENST00000520953 OR10J1P30954 320 aa11.69□□□□□ -0.54
SREK1-209ENST00000520953 ACOT6Q3I5F7 207 aaPredicted RBP11.69□□□□□ -0.54
SREK1-209ENST00000520953 MIC13Q5XKP0 118 aa11.69□□□□□ -0.54
SREK1-209ENST00000520953 TMEM144Q7Z5S9 345 aa11.69□□□□□ -0.54
SREK1-209ENST00000520953 TVP23CQ96ET8 276 aa11.69□□□□□ -0.54
SREK1-209ENST00000520953 GGTLC1Q9BX51 225 aa11.69□□□□□ -0.54
SREK1-209ENST00000520953 TSPAN9O75954 239 aa11.68□□□□□ -0.54
SREK1-209ENST00000520953 YIF1AO95070 293 aa11.68□□□□□ -0.54
SREK1-209ENST00000520953 IGHV3-11P01762 117 aa11.68□□□□□ -0.54
SREK1-209ENST00000520953 CD81P60033 236 aa11.68□□□□□ -0.54
SREK1-209ENST00000520953 KLK9Q2XQG4 91 aa11.68□□□□□ -0.54
SREK1-209ENST00000520953 TEPPQ6URK8 271 aa11.68□□□□□ -0.54
SREK1-209ENST00000520953 OR1L6Q8NGR2 347 aa11.68□□□□□ -0.54
SREK1-209ENST00000520953 GATAD1Q8WUU5 269 aa11.68□□□□□ -0.54
SREK1-209ENST00000520953 CCDC140Q96MF4 163 aa11.68□□□□□ -0.54
SREK1-209ENST00000520953 KLK9Q9UKQ9 250 aa11.68□□□□□ -0.54
SREK1-209ENST00000520953 ATRQ13535 2644 aa11.68□□□□□ -0.54
SREK1-209ENST00000520953 SEC14L6B5MCN3 397 aa11.68□□□□□ -0.54
SREK1-209ENST00000520953 CYB5BO43169 146 aa11.68□□□□□ -0.54
SREK1-209ENST00000520953 MT-ND4LP03901 98 aa11.68□□□□□ -0.54
SREK1-209ENST00000520953 FOLR2P14207 255 aa11.68□□□□□ -0.54
SREK1-209ENST00000520953 PSMB8P28062 276 aa11.68□□□□□ -0.54
SREK1-209ENST00000520953 TAGLN2P37802 199 aaKnown RBP11.68□□□□□ -0.54
SREK1-209ENST00000520953 CDC34P49427 236 aaPredicted RBP11.68□□□□□ -0.54
SREK1-209ENST00000520953 MEF2BQ02080 365 aaPredicted RBP11.68□□□□□ -0.54
SREK1-209ENST00000520953 NECAP1Q8NC96 275 aa11.68□□□□□ -0.54
SREK1-209ENST00000520953 TMEM116Q8NCL8 245 aa11.68□□□□□ -0.54
SREK1-209ENST00000520953 C21orf62Q9NYP8 219 aa11.68□□□□□ -0.54
SREK1-209ENST00000520953 ZNF580Q9UK33 172 aa11.68□□□□□ -0.54
SREK1-209ENST00000520953 PSMB11A5LHX3 300 aa11.67□□□□□ -0.54
SREK1-209ENST00000520953 OR2T8A6NH00 312 aa11.67□□□□□ -0.54
SREK1-209ENST00000520953 FNDC10F2Z333 226 aa11.67□□□□□ -0.54
SREK1-209ENST00000520953 TRBV12-3P01733 135 aa11.67□□□□□ -0.54
SREK1-209ENST00000520953 IGHG4P01861 327 aa11.67□□□□□ -0.54
SREK1-209ENST00000520953 RPLP1P05386 114 aaKnown RBP11.67□□□□□ -0.54
SREK1-209ENST00000520953 RAB9AP51151 201 aa11.67□□□□□ -0.54
SREK1-209ENST00000520953 TIGITQ495A1 244 aa11.67□□□□□ -0.54
SREK1-209ENST00000520953 FAM24BQ8N5W8 94 aa11.67□□□□□ -0.54
SREK1-209ENST00000520953 OR4X1Q8NH49 305 aa11.67□□□□□ -0.54
SREK1-209ENST00000520953 YPEL4Q96NS1 127 aa11.67□□□□□ -0.54
SREK1-209ENST00000520953 OR5B12Q96R08 314 aa11.67□□□□□ -0.54
SREK1-209ENST00000520953 PXMP4Q9Y6I8 212 aa11.67□□□□□ -0.54
SREK1-209ENST00000520953 ZNF727A8MUV8 499 aa11.67□□□□□ -0.54
SREK1-209ENST00000520953 IGLC1P0CG04 106 aa11.67□□□□□ -0.54
SREK1-209ENST00000520953 HIST1H1BP16401 226 aaKnown RBP11.67□□□□□ -0.54
SREK1-209ENST00000520953 KIAA0141Q14154 515 aaPredicted RBP11.67□□□□□ -0.54
SREK1-209ENST00000520953 ETFRF1Q6IPR1 90 aa11.67□□□□□ -0.54
SREK1-209ENST00000520953 THAP8Q8NA92 274 aa11.67□□□□□ -0.54
SREK1-209ENST00000520953 LINC01006Q8NI28 216 aa11.67□□□□□ -0.54
SREK1-209ENST00000520953 ZNF502Q8TBZ5 544 aa11.67□□□□□ -0.54
SREK1-209ENST00000520953 CHRDL1Q9BU40 450 aa11.67□□□□□ -0.54
SREK1-209ENST00000520953 THYN1Q9P016 225 aa11.67□□□□□ -0.54
SREK1-209ENST00000520953 A0A087WWC5 75 aa11.66□□□□□ -0.54
SREK1-209ENST00000520953 IGHV3-35A0A0C4DH35 117 aa11.66□□□□□ -0.54
SREK1-209ENST00000520953 OR2C1O95371 312 aa11.66□□□□□ -0.54
SREK1-209ENST00000520953 IGKV1-17P01599 117 aa11.66□□□□□ -0.54
SREK1-209ENST00000520953 GPR183P32249 361 aa11.66□□□□□ -0.54
SREK1-209ENST00000520953 PSMB3P49720 205 aa11.66□□□□□ -0.54
SREK1-209ENST00000520953 Q56UQ5 140 aa11.66□□□□□ -0.54
SREK1-209ENST00000520953 TCTEX1D4Q5JR98 221 aa11.66□□□□□ -0.54
SREK1-209ENST00000520953 CLEC19AQ6UXS0 136 aa11.66□□□□□ -0.54
SREK1-209ENST00000520953 IQCF2Q8IXL9 164 aa11.66□□□□□ -0.54
SREK1-209ENST00000520953 ZFP82Q8N141 532 aa11.66□□□□□ -0.54
SREK1-209ENST00000520953 C11orf44Q8N8P7 122 aa11.66□□□□□ -0.54
SREK1-209ENST00000520953 ZNF414Q96IQ9 312 aa11.66□□□□□ -0.54
SREK1-209ENST00000520953 SLC45A2Q9UMX9 530 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms