RNA–Protein interactions for RNA: ENST00000517181.1

RNU1-54P-201, Transcript of RNA, U1 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU1-54P, Length 120 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-54P-201ENST00000517181 TMEM56-RWDD3S4R434 201 aa-0.67□□□□□ -2.52
RNU1-54P-201ENST00000517181 DOCK5Q9H7D0 1870 aa-0.67□□□□□ -2.52
RNU1-54P-201ENST00000517181 HECW1Q76N89 1606 aa-0.67□□□□□ -2.52
RNU1-54P-201ENST00000517181 TRBV30A0A0K0K1B3 111 aa-0.68□□□□□ -2.52
RNU1-54P-201ENST00000517181 BCL9O00512 1426 aa-0.68□□□□□ -2.52
RNU1-54P-201ENST00000517181 KDM6AO15550 1401 aaPredicted RBP-0.68□□□□□ -2.52
RNU1-54P-201ENST00000517181 HIST1H1TP22492 207 aaPredicted RBP-0.68□□□□□ -2.52
RNU1-54P-201ENST00000517181 FXYD6P3P58550 94 aa-0.68□□□□□ -2.52
RNU1-54P-201ENST00000517181 QRFPP83859 136 aa-0.68□□□□□ -2.52
RNU1-54P-201ENST00000517181 CDKL4Q5MAI5 379 aa-0.68□□□□□ -2.52
RNU1-54P-201ENST00000517181 TRAPPC6BQ86SZ2 158 aa-0.68□□□□□ -2.52
RNU1-54P-201ENST00000517181 C20orf196Q8IYI0 205 aa-0.68□□□□□ -2.52
RNU1-54P-201ENST00000517181 ARHGEF28Q8N1W1 1705 aaKnown RBP-0.68□□□□□ -2.52
RNU1-54P-201ENST00000517181 TMEM254Q8TBM7 123 aa-0.68□□□□□ -2.52
RNU1-54P-201ENST00000517181 ADAT3Q96EY9 351 aaPredicted RBP-0.68□□□□□ -2.52
RNU1-54P-201ENST00000517181 BCL2L10Q9HD36 194 aa-0.68□□□□□ -2.52
RNU1-54P-201ENST00000517181 NCOR1O75376 2440 aa-0.69□□□□□ -2.52
RNU1-54P-201ENST00000517181 LOC285556D6RIA3 1793 aa-0.69□□□□□ -2.52
RNU1-54P-201ENST00000517181 SMIM9A6NGZ8 99 aa-0.69□□□□□ -2.52
RNU1-54P-201ENST00000517181 AHSA1O95433 338 aa-0.69□□□□□ -2.52
RNU1-54P-201ENST00000517181 SMIM10L2AP0DMW4 78 aa-0.69□□□□□ -2.52
RNU1-54P-201ENST00000517181 SMIM10L2BP0DMW5 78 aa-0.69□□□□□ -2.52
RNU1-54P-201ENST00000517181 RPS20P60866 119 aaKnown RBP-0.69□□□□□ -2.52
RNU1-54P-201ENST00000517181 CD200R1LQ6Q8B3 271 aa-0.69□□□□□ -2.52
RNU1-54P-201ENST00000517181 PLAC4Q8WY50 150 aa-0.69□□□□□ -2.52
RNU1-54P-201ENST00000517181 TP53RKQ96S44 253 aa-0.69□□□□□ -2.52
RNU1-54P-201ENST00000517181 GPER1Q99527 375 aa-0.69□□□□□ -2.52
RNU1-54P-201ENST00000517181 MED29Q9NX70 200 aa-0.69□□□□□ -2.52
RNU1-54P-201ENST00000517181 EVC2Q86UK5 1308 aa-0.69□□□□□ -2.52
RNU1-54P-201ENST00000517181 POLQO75417 2590 aa-0.69□□□□□ -2.52
RNU1-54P-201ENST00000517181 HECW2Q9P2P5 1572 aa-0.7□□□□□ -2.52
RNU1-54P-201ENST00000517181 NUPR2A6NF83 97 aa-0.7□□□□□ -2.52
RNU1-54P-201ENST00000517181 H0Y980 276 aa-0.7□□□□□ -2.52
RNU1-54P-201ENST00000517181 M0QZ92 97 aa-0.7□□□□□ -2.52
RNU1-54P-201ENST00000517181 APOEP02649 317 aa-0.7□□□□□ -2.52
RNU1-54P-201ENST00000517181 YPEL3P61236 119 aaPredicted RBP-0.7□□□□□ -2.52
RNU1-54P-201ENST00000517181 C10orf99Q6UWK7 81 aa-0.7□□□□□ -2.52
RNU1-54P-201ENST00000517181 OR51D1Q8NGF3 324 aa-0.7□□□□□ -2.52
RNU1-54P-201ENST00000517181 WFDC5Q8TCV5 224 aa-0.7□□□□□ -2.52
RNU1-54P-201ENST00000517181 OR52E6Q96RD3 313 aa-0.7□□□□□ -2.52
RNU1-54P-201ENST00000517181 UPF3BQ9BZI7 483 aaKnown RBP-0.7□□□□□ -2.52
RNU1-54P-201ENST00000517181 UTP11Q9Y3A2 253 aaKnown RBP-0.7□□□□□ -2.52
RNU1-54P-201ENST00000517181 AHCTF1Q8WYP5 2266 aa-0.7□□□□□ -2.52
RNU1-54P-201ENST00000517181 APC2O95996 2303 aa-0.7□□□□□ -2.52
RNU1-54P-201ENST00000517181 WRNQ14191 1432 aaPredicted RBP eCLIP-0.71□□□□□ -2.52
RNU1-54P-201ENST00000517181 CACNA1HO95180 2353 aa-0.71□□□□□ -2.52
RNU1-54P-201ENST00000517181 PLXND1Q9Y4D7 1925 aa-0.71□□□□□ -2.52
RNU1-54P-201ENST00000517181 A0A087X0T9 212 aa-0.71□□□□□ -2.52
RNU1-54P-201ENST00000517181 GADD45GO95257 159 aa-0.71□□□□□ -2.52
RNU1-54P-201ENST00000517181 S100A4P26447 101 aaKnown RBP-0.71□□□□□ -2.52
RNU1-54P-201ENST00000517181 RPL5P46777 297 aaKnown RBP-0.71□□□□□ -2.52
RNU1-54P-201ENST00000517181 ROMO1P60602 79 aa-0.71□□□□□ -2.52
RNU1-54P-201ENST00000517181 SKP1P63208 163 aa-0.71□□□□□ -2.52
RNU1-54P-201ENST00000517181 SPATA45Q537H7 98 aa-0.71□□□□□ -2.52
RNU1-54P-201ENST00000517181 C2orf82Q6UX34 121 aa-0.71□□□□□ -2.52
RNU1-54P-201ENST00000517181 PRR15Q8IV56 129 aa-0.71□□□□□ -2.52
RNU1-54P-201ENST00000517181 C12orf45Q8N5I9 185 aaPredicted RBP-0.71□□□□□ -2.52
RNU1-54P-201ENST00000517181 PPP1R2P1Q96PQ5 205 aa-0.71□□□□□ -2.52
RNU1-54P-201ENST00000517181 IDI2-AS1Q9NZ38 188 aa-0.71□□□□□ -2.52
RNU1-54P-201ENST00000517181 RIMBP3CA6NJZ7 1639 aa-0.71□□□□□ -2.52
RNU1-54P-201ENST00000517181 RIMBP3BA6NNM3 1639 aa-0.71□□□□□ -2.52
RNU1-54P-201ENST00000517181 FREM3P0C091 2139 aa-0.71□□□□□ -2.52
RNU1-54P-201ENST00000517181 HSPG2P98160 4391 aa-0.71□□□□□ -2.52
RNU1-54P-201ENST00000517181 ZGRF1Q86YA3 2104 aa-0.71□□□□□ -2.52
RNU1-54P-201ENST00000517181 RIMBP3Q9UFD9 1639 aa-0.71□□□□□ -2.52
RNU1-54P-201ENST00000517181 MYH7BA7E2Y1 1941 aa-0.72□□□□□ -2.52
RNU1-54P-201ENST00000517181 C9orf84Q5VXU9 1444 aa-0.72□□□□□ -2.52
RNU1-54P-201ENST00000517181 MYH10P35580 1976 aa-0.72□□□□□ -2.52
RNU1-54P-201ENST00000517181 TNXBP22105 4242 aa-0.72□□□□□ -2.52
RNU1-54P-201ENST00000517181 SLC16A4O15374 487 aa-0.72□□□□□ -2.52
RNU1-54P-201ENST00000517181 DYNLT1P63172 113 aa-0.72□□□□□ -2.52
RNU1-54P-201ENST00000517181 GDPD1Q8N9F7 314 aa-0.72□□□□□ -2.52
RNU1-54P-201ENST00000517181 OR2T35Q8NGX2 323 aa-0.72□□□□□ -2.52
RNU1-54P-201ENST00000517181 OR2T10Q8NGZ9 312 aa-0.72□□□□□ -2.52
RNU1-54P-201ENST00000517181 HIST1H2BLQ99880 126 aa-0.72□□□□□ -2.52
RNU1-54P-201ENST00000517181 MRPL27Q9P0M9 148 aaKnown RBP-0.72□□□□□ -2.52
RNU1-54P-201ENST00000517181 CYSLTR1Q9Y271 337 aa-0.72□□□□□ -2.52
RNU1-54P-201ENST00000517181 RFX7Q2KHR2 1363 aa-0.72□□□□□ -2.53
RNU1-54P-201ENST00000517181 ROBO3Q96MS0 1386 aa-0.72□□□□□ -2.53
RNU1-54P-201ENST00000517181 E7EUB6 86 aa-0.73□□□□□ -2.53
RNU1-54P-201ENST00000517181 LRRN3E7EW58 273 aa-0.73□□□□□ -2.53
RNU1-54P-201ENST00000517181 F8W1H4 67 aa-0.73□□□□□ -2.53
RNU1-54P-201ENST00000517181 H3BRM9 83 aa-0.73□□□□□ -2.53
RNU1-54P-201ENST00000517181 PSMD12O00232 456 aaPredicted RBP-0.73□□□□□ -2.53
RNU1-54P-201ENST00000517181 ISG15P05161 165 aa-0.73□□□□□ -2.53
RNU1-54P-201ENST00000517181 OCM2P0CE71 109 aa-0.73□□□□□ -2.53
RNU1-54P-201ENST00000517181 COX7CP15954 63 aa-0.73□□□□□ -2.53
RNU1-54P-201ENST00000517181 RNASE4P34096 147 aaKnown RBP-0.73□□□□□ -2.53
RNU1-54P-201ENST00000517181 ANP32AP39687 249 aaKnown RBP-0.73□□□□□ -2.53
RNU1-54P-201ENST00000517181 TCL1AP56279 114 aa-0.73□□□□□ -2.53
RNU1-54P-201ENST00000517181 PSME3P61289 254 aa-0.73□□□□□ -2.53
RNU1-54P-201ENST00000517181 HIST3H3Q16695 136 aa-0.73□□□□□ -2.53
RNU1-54P-201ENST00000517181 KRTAP19-7Q3SYF9 63 aa-0.73□□□□□ -2.53
RNU1-54P-201ENST00000517181 OGFRL1Q5TC84 451 aaPredicted RBP-0.73□□□□□ -2.53
RNU1-54P-201ENST00000517181 ANKRD29Q8N6D5 301 aa-0.73□□□□□ -2.53
RNU1-54P-201ENST00000517181 SLAMF6Q96DU3 332 aa-0.73□□□□□ -2.53
RNU1-54P-201ENST00000517181 TMEM133Q9H2Q1 129 aa-0.73□□□□□ -2.53
RNU1-54P-201ENST00000517181 RNF122Q9H9V4 155 aa-0.73□□□□□ -2.53
RNU1-54P-201ENST00000517181 TMEM138Q9NPI0 162 aa-0.73□□□□□ -2.53
RNU1-54P-201ENST00000517181 FGFR1OP2Q9NVK5 253 aa-0.73□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms