RNA–Protein interactions for RNA: ENST00000516826.1

RNU2-56P-201, Transcript of RNA, U2 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU2-56P, Length 190 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-56P-201ENST00000516826 RANP62826 216 aaKnown RBP0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 DYNLT1P63172 113 aa0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 HIST1H3AP68431 136 aa0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 H3F3AP84243 136 aa0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 EDDM3AQ14507 147 aa0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 SPINK9Q5DT21 86 aa0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 FAM74A1Q5RGS3 127 aa0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 LINC00575Q6W349 94 aa0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 ZNF833PQ6ZTB9 187 aa0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 KRT222Q8N1A0 295 aa0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 GDPD1Q8N9F7 314 aa0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 LINC00301Q8NCQ3 95 aa0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 PLPP5Q8NEB5 264 aa0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 DDI1Q8WTU0 396 aa0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 LINC00052Q96N35 136 aa0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 GPER1Q99527 375 aa0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 CCDC90BQ9GZT6 254 aa0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 TMEM126AQ9H061 195 aa0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 RNASE7Q9H1E1 156 aaKnown RBP0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 TLNRD1Q9H1K6 362 aa0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 TVP23BQ9NYZ1 205 aa0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 TMEM14CQ9P0S9 112 aa0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 UTP11Q9Y3A2 253 aaKnown RBP0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 TNS3Q68CZ2 1445 aa0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 A0A087WSZ3 146 aa0□□□□□ -2.41
RNU2-56P-201ENST00000516826 IGLV3-32A0A0A0MS00 114 aa0□□□□□ -2.41
RNU2-56P-201ENST00000516826 TLCD2A6NGC4 264 aa0□□□□□ -2.41
RNU2-56P-201ENST00000516826 E7EUB6 86 aa0□□□□□ -2.41
RNU2-56P-201ENST00000516826 ADCY9O60503 1353 aa0□□□□□ -2.41
RNU2-56P-201ENST00000516826 C8GP07360 202 aa0□□□□□ -2.41
RNU2-56P-201ENST00000516826 SRIP30626 198 aa0□□□□□ -2.41
RNU2-56P-201ENST00000516826 DSCR4P56555 118 aaPredicted RBP0□□□□□ -2.41
RNU2-56P-201ENST00000516826 CCDC88AQ3V6T2 1871 aa0□□□□□ -2.41
RNU2-56P-201ENST00000516826 KCPQ6ZWJ8 1503 aa0□□□□□ -2.41
RNU2-56P-201ENST00000516826 HECW1Q76N89 1606 aa0□□□□□ -2.41
RNU2-56P-201ENST00000516826 ATOH7Q8N100 152 aa0□□□□□ -2.41
RNU2-56P-201ENST00000516826 ARHGEF28Q8N1W1 1705 aaKnown RBP0□□□□□ -2.41
RNU2-56P-201ENST00000516826 OR11H6Q8NGC7 330 aa0□□□□□ -2.41
RNU2-56P-201ENST00000516826 OR52L1Q8NGH7 329 aa0□□□□□ -2.41
RNU2-56P-201ENST00000516826 OR2T10Q8NGZ9 312 aa0□□□□□ -2.41
RNU2-56P-201ENST00000516826 SLAMF6Q96DU3 332 aa0□□□□□ -2.41
RNU2-56P-201ENST00000516826 TP53RKQ96S44 253 aa0□□□□□ -2.41
RNU2-56P-201ENST00000516826 LINC00467Q9BRT7 94 aa0□□□□□ -2.41
RNU2-56P-201ENST00000516826 PRADC1Q9BSG0 188 aa0□□□□□ -2.41
RNU2-56P-201ENST00000516826 CTNNBIP1Q9NSA3 81 aaPredicted RBP0□□□□□ -2.41
RNU2-56P-201ENST00000516826 UQCC1Q9NVA1 299 aa0□□□□□ -2.41
RNU2-56P-201ENST00000516826 C14orf105Q9NVL8 296 aa0□□□□□ -2.41
RNU2-56P-201ENST00000516826 IDI2-AS1Q9NZ38 188 aa0□□□□□ -2.41
RNU2-56P-201ENST00000516826 ORMDL1Q9P0S3 153 aa0□□□□□ -2.41
RNU2-56P-201ENST00000516826 USP24Q9UPU5 2620 aa-0□□□□□ -2.41
RNU2-56P-201ENST00000516826 EML5Q05BV3 1969 aa-0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 KIAA1549Q9HCM3 1950 aa-0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 CEP192Q8TEP8 1941 aa-0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 RIMBP3CA6NJZ7 1639 aa-0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 RIMBP3BA6NNM3 1639 aa-0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 RIMBP3Q9UFD9 1639 aa-0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 PLB1Q6P1J6 1458 aa-0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 SYNE1Q8NF91 8797 aaKnown RBP-0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 KDM6AO15550 1401 aaPredicted RBP-0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 NCOA1Q15788 1441 aa-0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 RFX7Q2KHR2 1363 aa-0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 MAST4O15021 2626 aa-0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 hCG_1818297A0A087WSY0 165 aa-0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 SMIM9A6NGZ8 99 aa-0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 SMIM23A6NLE4 172 aa-0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 A8MT66 165 aa-0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 A8MWV9 139 aa-0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 NIPSNAP2O75323 286 aa-0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 KLF7O75840 302 aaPredicted RBP-0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 GADD45GO95257 159 aa-0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 IGLV3-1P01715 115 aa-0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 FOXA3P55318 350 aaPredicted RBP-0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 LSM6P62312 80 aaKnown RBP-0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 RGS21Q2M5E4 152 aa-0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 TMEM97Q5BJF2 176 aa-0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 PTRHD1Q6GMV3 140 aaKnown RBP-0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 C22orf39Q6P5X5 142 aa-0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 HAGHLQ6PII5 290 aaPredicted RBP-0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 ST6GALNAC3Q8NDV1 305 aa-0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 SLC30A7Q8NEW0 376 aa-0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 OR8J2Q8NGG1 315 aa-0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 OR2T35Q8NGX2 323 aa-0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 TMEM254Q8TBM7 123 aa-0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 SLC25A40Q8TBP6 338 aa-0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 CMSS1Q9BQ75 279 aaKnown RBP-0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 CCDC94Q9BW85 323 aaPredicted RBP-0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 C6orf62Q9GZU0 229 aaPredicted RBP-0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 GLTPQ9NZD2 209 aa-0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 FBXO5Q9UKT4 447 aa-0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 TNFSF18Q9UNG2 199 aa-0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 PRELID3BQ9Y3B1 194 aa-0.01□□□□□ -2.41
RNU2-56P-201ENST00000516826 PIK3C2GO75747 1445 aa-0.02□□□□□ -2.41
RNU2-56P-201ENST00000516826 RTL1A6NKG5 1358 aa-0.02□□□□□ -2.41
RNU2-56P-201ENST00000516826 DENND4CQ5VZ89 1909 aa-0.02□□□□□ -2.41
RNU2-56P-201ENST00000516826 TRGV10A0A0A0MS01 117 aa-0.02□□□□□ -2.41
RNU2-56P-201ENST00000516826 OR2T8A6NH00 312 aa-0.02□□□□□ -2.41
RNU2-56P-201ENST00000516826 B4DSR2 109 aa-0.02□□□□□ -2.41
RNU2-56P-201ENST00000516826 M0R378 163 aa-0.02□□□□□ -2.41
RNU2-56P-201ENST00000516826 CYB5BO43169 146 aa-0.02□□□□□ -2.41
RNU2-56P-201ENST00000516826 PDE6DO43924 150 aa-0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms