RNA–Protein interactions for RNA: ENST00000515829.6

SMG7-215, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMG7, Length 5,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-215ENST00000515829 TM4SF20Q53R12 229 aa8.37□□□□□ -1.07
SMG7-215ENST00000515829 Q9H3A6 140 aa8.37□□□□□ -1.07
SMG7-215ENST00000515829 MED13Q9UHV7 2174 aa8.37□□□□□ -1.07
SMG7-215ENST00000515829 MBNL2Q5VZF2 373 aaKnown RBP8.37□□□□□ -1.07
SMG7-215ENST00000515829 NIT1Q86X76 327 aa8.37□□□□□ -1.07
SMG7-215ENST00000515829 PYGO2Q9BRQ0 406 aa8.37□□□□□ -1.07
SMG7-215ENST00000515829 RPUSD1Q9UJJ7 312 aaKnown RBP8.37□□□□□ -1.07
SMG7-215ENST00000515829 EPDR1Q9UM22 224 aa8.37□□□□□ -1.07
SMG7-215ENST00000515829 LINC00312Q9Y6C7 94 aa8.37□□□□□ -1.07
SMG7-215ENST00000515829 IGHV3OR16-8A0A075B7F1 116 aa8.37□□□□□ -1.07
SMG7-215ENST00000515829 TDRG1Q3Y452 100 aa8.37□□□□□ -1.07
SMG7-215ENST00000515829 EEF1AKMT3Q96AZ1 226 aa8.37□□□□□ -1.07
SMG7-215ENST00000515829 MCRIP2Q9BUT9 160 aaKnown RBP8.37□□□□□ -1.07
SMG7-215ENST00000515829 CHD3Q12873 2000 aaKnown RBP8.36□□□□□ -1.07
SMG7-215ENST00000515829 IGKV3-7A0A075B6H7 116 aa8.36□□□□□ -1.07
SMG7-215ENST00000515829 HLA-DRB1P01911 266 aa8.36□□□□□ -1.07
SMG7-215ENST00000515829 SELENOKQ9Y6D0 94 aa8.36□□□□□ -1.07
SMG7-215ENST00000515829 FBLL1A6NHQ2 334 aaKnown RBP8.36□□□□□ -1.07
SMG7-215ENST00000515829 NPIPB6E9PJ23 425 aa8.36□□□□□ -1.07
SMG7-215ENST00000515829 IL4P05112 153 aa8.36□□□□□ -1.07
SMG7-215ENST00000515829 RPL24P83731 157 aaKnown RBP8.36□□□□□ -1.07
SMG7-215ENST00000515829 ATP5G2Q06055 141 aa8.36□□□□□ -1.07
SMG7-215ENST00000515829 SRSF9Q13242 221 aaKnown RBP eCLIP8.36□□□□□ -1.07
SMG7-215ENST00000515829 SAPCD1Q5SSQ6 148 aa8.36□□□□□ -1.07
SMG7-215ENST00000515829 GTF3C1Q12789 2109 aa8.36□□□□□ -1.07
SMG7-215ENST00000515829 TCRBV4S1A1TA0A5B7 111 aa8.36□□□□□ -1.07
SMG7-215ENST00000515829 K7EN84 100 aa8.36□□□□□ -1.07
SMG7-215ENST00000515829 CIDEAO60543 219 aa8.36□□□□□ -1.07
SMG7-215ENST00000515829 NPSP0C0P6 89 aa8.36□□□□□ -1.07
SMG7-215ENST00000515829 ARF6P62330 175 aa8.36□□□□□ -1.07
SMG7-215ENST00000515829 C12orf54Q6X4T0 127 aa8.36□□□□□ -1.07
SMG7-215ENST00000515829 C5orf30Q96GV9 206 aa8.36□□□□□ -1.07
SMG7-215ENST00000515829 PLSCR4Q9NRQ2 329 aa8.36□□□□□ -1.07
SMG7-215ENST00000515829 CGB1A6NKQ9 187 aa8.36□□□□□ -1.07
SMG7-215ENST00000515829 C15orf65H3BRN8 121 aa8.36□□□□□ -1.07
SMG7-215ENST00000515829 APOHP02749 345 aaPredicted RBP8.36□□□□□ -1.07
SMG7-215ENST00000515829 TSPOP30536 169 aa8.36□□□□□ -1.07
SMG7-215ENST00000515829 CKS2P33552 79 aa8.36□□□□□ -1.07
SMG7-215ENST00000515829 RPL15P61313 204 aaKnown RBP8.36□□□□□ -1.07
SMG7-215ENST00000515829 BSPH1Q075Z2 132 aa8.36□□□□□ -1.07
SMG7-215ENST00000515829 NUP35Q8NFH5 326 aa8.36□□□□□ -1.07
SMG7-215ENST00000515829 YPEL4Q96NS1 127 aa8.36□□□□□ -1.07
SMG7-215ENST00000515829 DCAF16Q9NXF7 216 aa8.36□□□□□ -1.07
SMG7-215ENST00000515829 MED12LQ86YW9 2145 aa8.36□□□□□ -1.07
SMG7-215ENST00000515829 TRAV9-2A0A087WT02 112 aa8.35□□□□□ -1.07
SMG7-215ENST00000515829 PSMB2P49721 201 aa8.35□□□□□ -1.07
SMG7-215ENST00000515829 WFDC3Q8IUB2 231 aa8.35□□□□□ -1.07
SMG7-215ENST00000515829 GUCD1Q96NT3 240 aa8.35□□□□□ -1.07
SMG7-215ENST00000515829 SLC25A15Q9Y619 301 aa8.35□□□□□ -1.07
SMG7-215ENST00000515829 CD24P25063 80 aa8.35□□□□□ -1.07
SMG7-215ENST00000515829 C2orf83Q53S99 150 aa8.35□□□□□ -1.07
SMG7-215ENST00000515829 ZNF841Q6ZN19 808 aa8.35□□□□□ -1.07
SMG7-215ENST00000515829 CENPVQ7Z7K6 275 aaPredicted RBP8.35□□□□□ -1.07
SMG7-215ENST00000515829 C11orf53Q8IXP5 236 aa8.35□□□□□ -1.07
SMG7-215ENST00000515829 PNKDQ8N490 385 aa8.35□□□□□ -1.07
SMG7-215ENST00000515829 TSKUQ8WUA8 353 aa8.35□□□□□ -1.07
SMG7-215ENST00000515829 ASCL2Q99929 193 aa8.35□□□□□ -1.07
SMG7-215ENST00000515829 DPM3Q9P2X0 92 aa8.35□□□□□ -1.07
SMG7-215ENST00000515829 IGHV3-23P01764 117 aa8.35□□□□□ -1.07
SMG7-215ENST00000515829 ZNF138P52744 262 aa8.35□□□□□ -1.07
SMG7-215ENST00000515829 YPEL3P61236 119 aaPredicted RBP8.35□□□□□ -1.07
SMG7-215ENST00000515829 F11RQ9Y624 299 aaKnown RBP8.35□□□□□ -1.07
SMG7-215ENST00000515829 V9GYV3 84 aa8.35□□□□□ -1.07
SMG7-215ENST00000515829 TMEM238LA0A1B0GVL6 79 aa8.35□□□□□ -1.07
SMG7-215ENST00000515829 A6NJY4 79 aa8.35□□□□□ -1.07
SMG7-215ENST00000515829 GGTLC3B5MD39 225 aa8.35□□□□□ -1.07
SMG7-215ENST00000515829 MAP1LC3AQ9H492 121 aa8.35□□□□□ -1.07
SMG7-215ENST00000515829 ZNF257Q9Y2Q1 563 aa8.35□□□□□ -1.07
SMG7-215ENST00000515829 ABCA4P78363 2273 aa8.34□□□□□ -1.07
SMG7-215ENST00000515829 TRBV20OR9-2A0A075B6H5 130 aa8.34□□□□□ -1.07
SMG7-215ENST00000515829 TRAV8-1A0A0A6YYK1 113 aa8.34□□□□□ -1.07
SMG7-215ENST00000515829 FAM181BA6NEQ2 426 aa8.34□□□□□ -1.07
SMG7-215ENST00000515829 GAGE10A6NGK3 116 aa8.34□□□□□ -1.07
SMG7-215ENST00000515829 C17orf100A8MU93 164 aa8.34□□□□□ -1.07
SMG7-215ENST00000515829 LYNX1G3V0Z9 82 aa8.34□□□□□ -1.07
SMG7-215ENST00000515829 LYNX1P0DP58 116 aa8.34□□□□□ -1.07
SMG7-215ENST00000515829 ATP5J2P56134 94 aa8.34□□□□□ -1.07
SMG7-215ENST00000515829 CHODLQ9H9P2 273 aa8.34□□□□□ -1.07
SMG7-215ENST00000515829 FRMD6-AS1P0C7T7 363 aa8.34□□□□□ -1.07
SMG7-215ENST00000515829 TMEM136Q6ZRR5 245 aa8.34□□□□□ -1.07
SMG7-215ENST00000515829 RCHY1Q96PM5 261 aa8.34□□□□□ -1.07
SMG7-215ENST00000515829 PMS2P5A8MQ11 134 aa8.34□□□□□ -1.07
SMG7-215ENST00000515829 MMP23AO75900 390 aa8.34□□□□□ -1.07
SMG7-215ENST00000515829 RNASE2P10153 161 aaKnown RBP8.34□□□□□ -1.07
SMG7-215ENST00000515829 COA6Q5JTJ3 125 aaKnown RBP8.34□□□□□ -1.07
SMG7-215ENST00000515829 PLCE1Q9P212 2302 aa8.34□□□□□ -1.07
SMG7-215ENST00000515829 RPRMLQ8N4K4 120 aa8.34□□□□□ -1.07
SMG7-215ENST00000515829 OR10AG1Q8NH19 301 aa8.34□□□□□ -1.07
SMG7-215ENST00000515829 IGHV3OR16-13A0A075B7E8 117 aa8.33□□□□□ -1.08
SMG7-215ENST00000515829 IGHV3-74A0A0B4J1X5 117 aa8.33□□□□□ -1.08
SMG7-215ENST00000515829 EXOC3-AS1Q8N2X6 119 aa8.33□□□□□ -1.08
SMG7-215ENST00000515829 C18orf15Q96N68 181 aa8.33□□□□□ -1.08
SMG7-215ENST00000515829 LY96Q9Y6Y9 160 aa8.33□□□□□ -1.08
SMG7-215ENST00000515829 A0A1B0GUT8 65 aa8.33□□□□□ -1.08
SMG7-215ENST00000515829 hDV102S1A0JD36 115 aa8.33□□□□□ -1.08
SMG7-215ENST00000515829 HTN1P15515 57 aa8.33□□□□□ -1.08
SMG7-215ENST00000515829 Q0VG73 95 aa8.33□□□□□ -1.08
SMG7-215ENST00000515829 GAFA1Q96PS6 74 aa8.33□□□□□ -1.08
SMG7-215ENST00000515829 C20orf144Q9BQM9 153 aa8.33□□□□□ -1.08
SMG7-215ENST00000515829 TMEM14BQ9NUH8 114 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms