RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 GPX4P36969 197 aaPredicted RBP7.63□□□□□ -1.19
HMGXB3-205ENST00000514469 AP2S1P53680 142 aaPredicted RBP7.63□□□□□ -1.19
HMGXB3-205ENST00000514469 DHRS2Q13268 280 aa7.63□□□□□ -1.19
HMGXB3-205ENST00000514469 PPP1R1AQ13522 171 aa7.63□□□□□ -1.19
HMGXB3-205ENST00000514469 GAMTQ14353 236 aa7.63□□□□□ -1.19
HMGXB3-205ENST00000514469 TMEM41BQ5BJD5 291 aa7.63□□□□□ -1.19
HMGXB3-205ENST00000514469 MORN3Q6PF18 240 aaPredicted RBP7.63□□□□□ -1.19
HMGXB3-205ENST00000514469 OR51G1Q8NGK1 321 aa7.63□□□□□ -1.19
HMGXB3-205ENST00000514469 RNF125Q96EQ8 232 aa7.63□□□□□ -1.19
HMGXB3-205ENST00000514469 KNCNA6PVL3 124 aa7.62□□□□□ -1.19
HMGXB3-205ENST00000514469 SFT2D2O95562 160 aa7.62□□□□□ -1.19
HMGXB3-205ENST00000514469 IFNA4P05014 189 aa7.62□□□□□ -1.19
HMGXB3-205ENST00000514469 IAPPP10997 89 aa7.62□□□□□ -1.19
HMGXB3-205ENST00000514469 NUP62P37198 522 aaPredicted RBP7.62□□□□□ -1.19
HMGXB3-205ENST00000514469 PSMG4Q5JS54 123 aa7.62□□□□□ -1.19
HMGXB3-205ENST00000514469 SPANXN2Q5MJ10 180 aa7.62□□□□□ -1.19
HMGXB3-205ENST00000514469 OR8G2PQ6IF36 304 aa7.62□□□□□ -1.19
HMGXB3-205ENST00000514469 SIGLEC15Q6ZMC9 328 aa7.62□□□□□ -1.19
HMGXB3-205ENST00000514469 CENPSQ8N2Z9 138 aa7.62□□□□□ -1.19
HMGXB3-205ENST00000514469 Q8NAQ8 132 aa7.62□□□□□ -1.19
HMGXB3-205ENST00000514469 PHLDA1Q8WV24 401 aaPredicted RBP7.62□□□□□ -1.19
HMGXB3-205ENST00000514469 SLC35E1Q96K37 410 aa7.62□□□□□ -1.19
HMGXB3-205ENST00000514469 SEPSECSQ9HD40 501 aaKnown RBP7.62□□□□□ -1.19
HMGXB3-205ENST00000514469 NRN1Q9NPD7 142 aa7.62□□□□□ -1.19
HMGXB3-205ENST00000514469 KLK5Q9Y337 293 aaPredicted RBP7.62□□□□□ -1.19
HMGXB3-205ENST00000514469 TMED3Q9Y3Q3 217 aa7.62□□□□□ -1.19
HMGXB3-205ENST00000514469 ZFP92A6NM28 416 aa7.61□□□□□ -1.19
HMGXB3-205ENST00000514469 PRSS46E5RG02 174 aa7.61□□□□□ -1.19
HMGXB3-205ENST00000514469 NANOS2P60321 138 aaKnown RBP7.61□□□□□ -1.19
HMGXB3-205ENST00000514469 UBE2MP61081 183 aaKnown RBP7.61□□□□□ -1.19
HMGXB3-205ENST00000514469 ZNF90Q03938 601 aa7.61□□□□□ -1.19
HMGXB3-205ENST00000514469 ACTL10Q5JWF8 245 aa7.61□□□□□ -1.19
HMGXB3-205ENST00000514469 MFFQ9GZY8 342 aa7.61□□□□□ -1.19
HMGXB3-205ENST00000514469 KMT2AQ03164 3969 aa7.6□□□□□ -1.19
HMGXB3-205ENST00000514469 IGKV1OR2-108A0A075B7D4 117 aa7.6□□□□□ -1.19
HMGXB3-205ENST00000514469 NAP1L6A6NFF2 107 aa7.6□□□□□ -1.19
HMGXB3-205ENST00000514469 ZNF705EA8MWA4 302 aaPredicted RBP7.6□□□□□ -1.19
HMGXB3-205ENST00000514469 SYNGR2O43760 224 aa7.6□□□□□ -1.19
HMGXB3-205ENST00000514469 MED6O75586 246 aa7.6□□□□□ -1.19
HMGXB3-205ENST00000514469 NDUFB6O95139 128 aa7.6□□□□□ -1.19
HMGXB3-205ENST00000514469 LY6G6CO95867 125 aa7.6□□□□□ -1.19
HMGXB3-205ENST00000514469 FABP1P07148 127 aa7.6□□□□□ -1.19
HMGXB3-205ENST00000514469 SNRPD3P62318 126 aaKnown RBP7.6□□□□□ -1.19
HMGXB3-205ENST00000514469 RAB11AP62491 216 aa7.6□□□□□ -1.19
HMGXB3-205ENST00000514469 BAK1Q16611 211 aa7.6□□□□□ -1.19
HMGXB3-205ENST00000514469 GGNBP1Q5YKI7 109 aa7.6□□□□□ -1.19
HMGXB3-205ENST00000514469 THAP8Q8NA92 274 aa7.6□□□□□ -1.19
HMGXB3-205ENST00000514469 CSNK1G2-AS1Q8NCQ2 148 aa7.6□□□□□ -1.19
HMGXB3-205ENST00000514469 C11orf45Q8TAV5 145 aa7.6□□□□□ -1.19
HMGXB3-205ENST00000514469 CIB3Q96Q77 187 aaPredicted RBP7.6□□□□□ -1.19
HMGXB3-205ENST00000514469 RAB40CQ96S21 281 aa7.6□□□□□ -1.19
HMGXB3-205ENST00000514469 TRGV9Q99603 122 aa7.6□□□□□ -1.19
HMGXB3-205ENST00000514469 PBDC1Q9BVG4 233 aa7.6□□□□□ -1.19
HMGXB3-205ENST00000514469 IGHV4-28A0A0C4DH34 117 aa7.59□□□□□ -1.19
HMGXB3-205ENST00000514469 DEFB4AO15263 64 aa7.59□□□□□ -1.19
HMGXB3-205ENST00000514469 HOXB5P09067 269 aa7.59□□□□□ -1.19
HMGXB3-205ENST00000514469 MIFP14174 115 aa7.59□□□□□ -1.19
HMGXB3-205ENST00000514469 LYZP61626 148 aa7.59□□□□□ -1.19
HMGXB3-205ENST00000514469 RPP30P78346 268 aaKnown RBP7.59□□□□□ -1.19
HMGXB3-205ENST00000514469 C1orf194Q5T5A4 169 aa7.59□□□□□ -1.19
HMGXB3-205ENST00000514469 TRIQKQ629K1 86 aa7.59□□□□□ -1.19
HMGXB3-205ENST00000514469 SDHCQ99643 169 aaPredicted RBP7.59□□□□□ -1.19
HMGXB3-205ENST00000514469 MAGT1Q9H0U3 335 aa7.59□□□□□ -1.19
HMGXB3-205ENST00000514469 HRH4Q9H3N8 390 aa7.59□□□□□ -1.19
HMGXB3-205ENST00000514469 PFDN2Q9UHV9 154 aa7.59□□□□□ -1.19
HMGXB3-205ENST00000514469 X6R8D5 127 aa7.59□□□□□ -1.19
HMGXB3-205ENST00000514469 VPS13DQ5THJ4 4388 aa7.59□□□□□ -1.2
HMGXB3-205ENST00000514469 C9orf170A2RU37 121 aa7.58□□□□□ -1.2
HMGXB3-205ENST00000514469 H3BMM0 161 aa7.58□□□□□ -1.2
HMGXB3-205ENST00000514469 WRBO00258 174 aa7.58□□□□□ -1.2
HMGXB3-205ENST00000514469 SOCS3O14543 225 aa7.58□□□□□ -1.2
HMGXB3-205ENST00000514469 ADAP1O75689 374 aa7.58□□□□□ -1.2
HMGXB3-205ENST00000514469 RBMY1A1P0DJD3 496 aaKnown RBP7.58□□□□□ -1.2
HMGXB3-205ENST00000514469 RBMY1CP0DJD4 496 aa7.58□□□□□ -1.2
HMGXB3-205ENST00000514469 HLA-DRB4P13762 266 aa7.58□□□□□ -1.2
HMGXB3-205ENST00000514469 BTCP35070 178 aa7.58□□□□□ -1.2
HMGXB3-205ENST00000514469 NKX2-1P43699 371 aaPredicted RBP7.58□□□□□ -1.2
HMGXB3-205ENST00000514469 RBMY1FQ15415 496 aaKnown RBP7.58□□□□□ -1.2
HMGXB3-205ENST00000514469 CLEC5AQ9NY25 188 aa7.58□□□□□ -1.2
HMGXB3-205ENST00000514469 FBXL17Q9UF56 701 aa7.58□□□□□ -1.2
HMGXB3-205ENST00000514469 PAIP2BQ9ULR5 123 aaKnown RBP7.58□□□□□ -1.2
HMGXB3-205ENST00000514469 HLA-DRB4X5D2U9 266 aa7.58□□□□□ -1.2
HMGXB3-205ENST00000514469 FRAS1Q86XX4 4008 aa7.57□□□□□ -1.2
HMGXB3-205ENST00000514469 SNRPGP15A8MWD9 76 aa7.57□□□□□ -1.2
HMGXB3-205ENST00000514469 H3BP45 60 aa7.57□□□□□ -1.2
HMGXB3-205ENST00000514469 OR4E1P0C645 316 aa7.57□□□□□ -1.2
HMGXB3-205ENST00000514469 INPP1P49441 399 aa7.57□□□□□ -1.2
HMGXB3-205ENST00000514469 PSMB3P49720 205 aa7.57□□□□□ -1.2
HMGXB3-205ENST00000514469 NUTF2P61970 127 aaKnown RBP7.57□□□□□ -1.2
HMGXB3-205ENST00000514469 ID3Q02535 119 aa7.57□□□□□ -1.2
HMGXB3-205ENST00000514469 OR2F1Q13607 317 aa7.57□□□□□ -1.2
HMGXB3-205ENST00000514469 LGALS9CQ6DKI2 356 aa7.57□□□□□ -1.2
HMGXB3-205ENST00000514469 ACOT7LQ6ZUV0 252 aa7.57□□□□□ -1.2
HMGXB3-205ENST00000514469 OR4D5Q8NGN0 318 aa7.57□□□□□ -1.2
HMGXB3-205ENST00000514469 COQ8AQ8NI60 647 aa7.57□□□□□ -1.2
HMGXB3-205ENST00000514469 C7orf50Q9BRJ6 194 aaKnown RBP7.57□□□□□ -1.2
HMGXB3-205ENST00000514469 C1QTNF4Q9BXJ3 329 aa7.57□□□□□ -1.2
HMGXB3-205ENST00000514469 WDR12Q9GZL7 423 aaKnown RBP7.57□□□□□ -1.2
HMGXB3-205ENST00000514469 TBC1D24Q9ULP9 559 aa7.57□□□□□ -1.2
HMGXB3-205ENST00000514469 SLC45A2Q9UMX9 530 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms