RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 PEMTQ9UBM1 199 aa7.81□□□□□ -1.16
NEDD9-214ENST00000513989 FBXL17Q9UF56 701 aa7.81□□□□□ -1.16
NEDD9-214ENST00000513989 UFC1Q9Y3C8 167 aa7.81□□□□□ -1.16
NEDD9-214ENST00000513989 UBE2L5PA0A1B0GUS4 154 aa7.8□□□□□ -1.16
NEDD9-214ENST00000513989 RNF222A6NCQ9 220 aa7.8□□□□□ -1.16
NEDD9-214ENST00000513989 ADARB2-AS1A8MUL3 147 aa7.8□□□□□ -1.16
NEDD9-214ENST00000513989 F8W735 103 aaPredicted RBP7.8□□□□□ -1.16
NEDD9-214ENST00000513989 TOMM40O96008 361 aa7.8□□□□□ -1.16
NEDD9-214ENST00000513989 IGKV1-17P01599 117 aa7.8□□□□□ -1.16
NEDD9-214ENST00000513989 TRBV12-3P01733 135 aa7.8□□□□□ -1.16
NEDD9-214ENST00000513989 BMI1P35226 326 aa7.8□□□□□ -1.16
NEDD9-214ENST00000513989 CAMLGP49069 296 aa7.8□□□□□ -1.16
NEDD9-214ENST00000513989 KLF5Q13887 457 aaPredicted RBP7.8□□□□□ -1.16
NEDD9-214ENST00000513989 DEFB136Q30KP8 78 aa7.8□□□□□ -1.16
NEDD9-214ENST00000513989 PXDC1Q5TGL8 231 aa7.8□□□□□ -1.16
NEDD9-214ENST00000513989 CYP2G1PQ6ZSU1 146 aa7.8□□□□□ -1.16
NEDD9-214ENST00000513989 TMUB2Q71RG4 321 aa7.8□□□□□ -1.16
NEDD9-214ENST00000513989 C1QL4Q86Z23 238 aa7.8□□□□□ -1.16
NEDD9-214ENST00000513989 OR51G1Q8NGK1 321 aa7.8□□□□□ -1.16
NEDD9-214ENST00000513989 PPP1R14BQ96C90 147 aa7.8□□□□□ -1.16
NEDD9-214ENST00000513989 NARS2Q96I59 477 aaKnown RBP7.8□□□□□ -1.16
NEDD9-214ENST00000513989 CHRDL1Q9BU40 450 aa7.8□□□□□ -1.16
NEDD9-214ENST00000513989 PARD6GQ9BYG4 376 aaPredicted RBP7.8□□□□□ -1.16
NEDD9-214ENST00000513989 WDR61Q9GZS3 305 aaKnown RBP7.8□□□□□ -1.16
NEDD9-214ENST00000513989 RNF24Q9Y225 148 aa7.8□□□□□ -1.16
NEDD9-214ENST00000513989 WDR83OSQ9Y284 106 aa7.8□□□□□ -1.16
NEDD9-214ENST00000513989 LSM4Q9Y4Z0 139 aaKnown RBP7.8□□□□□ -1.16
NEDD9-214ENST00000513989 K7EMT4 169 aa7.79□□□□□ -1.16
NEDD9-214ENST00000513989 LGALS9O00182 355 aa7.79□□□□□ -1.16
NEDD9-214ENST00000513989 AGPAT2O15120 278 aa7.79□□□□□ -1.16
NEDD9-214ENST00000513989 PSG1P11464 419 aa7.79□□□□□ -1.16
NEDD9-214ENST00000513989 NPPCP23582 126 aa7.79□□□□□ -1.16
NEDD9-214ENST00000513989 ADMP35318 185 aa7.79□□□□□ -1.16
NEDD9-214ENST00000513989 RPL29P47914 159 aaKnown RBP7.79□□□□□ -1.16
NEDD9-214ENST00000513989 ELLP55199 621 aaPredicted RBP7.79□□□□□ -1.16
NEDD9-214ENST00000513989 SYNJ2BPP57105 145 aa7.79□□□□□ -1.16
NEDD9-214ENST00000513989 ZNF90Q03938 601 aa7.79□□□□□ -1.16
NEDD9-214ENST00000513989 FHL3Q13643 280 aa7.79□□□□□ -1.16
NEDD9-214ENST00000513989 HIST2H2BDQ6DRA6 164 aa7.79□□□□□ -1.16
NEDD9-214ENST00000513989 GNPNAT1Q96EK6 184 aaPredicted RBP7.79□□□□□ -1.16
NEDD9-214ENST00000513989 METTL26Q96S19 204 aa7.79□□□□□ -1.16
NEDD9-214ENST00000513989 C20orf24Q9BUV8 137 aa7.79□□□□□ -1.16
NEDD9-214ENST00000513989 PUS1Q9Y606 427 aaKnown RBP eCLIP7.79□□□□□ -1.16
NEDD9-214ENST00000513989 COL7A1Q02388 2944 aa7.78□□□□□ -1.16
NEDD9-214ENST00000513989 IGKV1D-37A0A075B6S9 117 aa7.78□□□□□ -1.16
NEDD9-214ENST00000513989 IGKV1OR2-108A0A075B7D4 117 aa7.78□□□□□ -1.16
NEDD9-214ENST00000513989 ELOA3CA0A087WX78 387 aaPredicted RBP7.78□□□□□ -1.16
NEDD9-214ENST00000513989 IGHV3-35A0A0C4DH35 117 aa7.78□□□□□ -1.16
NEDD9-214ENST00000513989 A0A1W2PS18 150 aa7.78□□□□□ -1.16
NEDD9-214ENST00000513989 OVOL1O14753 267 aa7.78□□□□□ -1.16
NEDD9-214ENST00000513989 BCL2L11O43521 198 aa7.78□□□□□ -1.16
NEDD9-214ENST00000513989 HYPMO75409 117 aa7.78□□□□□ -1.16
NEDD9-214ENST00000513989 TSPAN15O95858 294 aa7.78□□□□□ -1.16
NEDD9-214ENST00000513989 IL4P05112 153 aa7.78□□□□□ -1.16
NEDD9-214ENST00000513989 HNRNPCP07910 306 aaKnown RBP eCLIP7.78□□□□□ -1.16
NEDD9-214ENST00000513989 CXCL2P19875 107 aa7.78□□□□□ -1.16
NEDD9-214ENST00000513989 SLURP1P55000 103 aa7.78□□□□□ -1.16
NEDD9-214ENST00000513989 CD300CQ08708 224 aa7.78□□□□□ -1.16
NEDD9-214ENST00000513989 LGALSLQ3ZCW2 172 aaPredicted RBP7.78□□□□□ -1.16
NEDD9-214ENST00000513989 EIF5AL1Q6IS14 154 aaKnown RBP7.78□□□□□ -1.16
NEDD9-214ENST00000513989 TOMM20LQ6UXN7 152 aa7.78□□□□□ -1.16
NEDD9-214ENST00000513989 REC114Q7Z4M0 266 aa7.78□□□□□ -1.16
NEDD9-214ENST00000513989 OR1L4Q8NGR5 311 aa7.78□□□□□ -1.16
NEDD9-214ENST00000513989 DLX4Q92988 240 aaPredicted RBP7.78□□□□□ -1.16
NEDD9-214ENST00000513989 MARC2Q969Z3 335 aa7.78□□□□□ -1.16
NEDD9-214ENST00000513989 DUX3Q96PT4 197 aa7.78□□□□□ -1.16
NEDD9-214ENST00000513989 MGST2Q99735 147 aa7.78□□□□□ -1.16
NEDD9-214ENST00000513989 MCRIP2Q9BUT9 160 aaKnown RBP7.78□□□□□ -1.16
NEDD9-214ENST00000513989 PBDC1Q9BVG4 233 aa7.78□□□□□ -1.16
NEDD9-214ENST00000513989 ZNF471Q9BX82 626 aaPredicted RBP7.78□□□□□ -1.16
NEDD9-214ENST00000513989 NPCDR1Q9BY65 106 aa7.78□□□□□ -1.16
NEDD9-214ENST00000513989 WFDC1Q9HC57 220 aa7.78□□□□□ -1.16
NEDD9-214ENST00000513989 RABAC1Q9UI14 185 aa7.78□□□□□ -1.16
NEDD9-214ENST00000513989 SLC45A2Q9UMX9 530 aa7.78□□□□□ -1.16
NEDD9-214ENST00000513989 MBP02144 154 aa7.77□□□□□ -1.17
NEDD9-214ENST00000513989 ORM2P19652 201 aa7.77□□□□□ -1.17
NEDD9-214ENST00000513989 CD33P20138 364 aa7.77□□□□□ -1.17
NEDD9-214ENST00000513989 LYZP61626 148 aa7.77□□□□□ -1.17
NEDD9-214ENST00000513989 B2MP61769 119 aa7.77□□□□□ -1.17
NEDD9-214ENST00000513989 OR9G4Q8NGQ1 327 aa7.77□□□□□ -1.17
NEDD9-214ENST00000513989 RNF125Q96EQ8 232 aa7.77□□□□□ -1.17
NEDD9-214ENST00000513989 GRAMD2BQ96HH9 432 aa7.77□□□□□ -1.17
NEDD9-214ENST00000513989 PFDN5Q99471 154 aa7.77□□□□□ -1.17
NEDD9-214ENST00000513989 TMEM231Q9H6L2 316 aa7.77□□□□□ -1.17
NEDD9-214ENST00000513989 DNAJC4Q9NNZ3 241 aa7.77□□□□□ -1.17
NEDD9-214ENST00000513989 DAZ1Q9NQZ3 744 aaKnown RBP7.77□□□□□ -1.17
NEDD9-214ENST00000513989 TIMM9Q9Y5J7 89 aa7.77□□□□□ -1.17
NEDD9-214ENST00000513989 NBEAL2Q6ZNJ1 2754 aa7.76□□□□□ -1.17
NEDD9-214ENST00000513989 WI2-2373I1.2A0A1W2PRP0 233 aa7.76□□□□□ -1.17
NEDD9-214ENST00000513989 COX7A2P2O60397 106 aa7.76□□□□□ -1.17
NEDD9-214ENST00000513989 CD5P06127 495 aa7.76□□□□□ -1.17
NEDD9-214ENST00000513989 LINC00869P0C866 280 aa7.76□□□□□ -1.17
NEDD9-214ENST00000513989 TPT1P13693 172 aaKnown RBP7.76□□□□□ -1.17
NEDD9-214ENST00000513989 SERF2P84101 59 aa7.76□□□□□ -1.17
NEDD9-214ENST00000513989 OPCMLQ14982 345 aa7.76□□□□□ -1.17
NEDD9-214ENST00000513989 RPL7L1Q6DKI1 246 aaKnown RBP7.76□□□□□ -1.17
NEDD9-214ENST00000513989 SLC51BQ86UW2 128 aa7.76□□□□□ -1.17
NEDD9-214ENST00000513989 STPG3Q8N7X2 389 aa7.76□□□□□ -1.17
NEDD9-214ENST00000513989 HSD17B11Q8NBQ5 300 aa7.76□□□□□ -1.17
NEDD9-214ENST00000513989 OR1B1Q8NGR6 318 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms